RNA–Protein interactions for RNA: ENST00000553043.1

LETMD1-236, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-236ENST00000553043 DIP2BQ9P265 1576 aa12.56□□□□□ -0.4
LETMD1-236ENST00000553043 SHROOM2Q13796 1616 aa12.55□□□□□ -0.4
LETMD1-236ENST00000553043 ABCA5Q8WWZ7 1642 aa12.54□□□□□ -0.4
LETMD1-236ENST00000553043 MAPKBP1O60336 1514 aa12.53□□□□□ -0.4
LETMD1-236ENST00000553043 FHAD1B1AJZ9 1412 aa12.51□□□□□ -0.41
LETMD1-236ENST00000553043 ADAMTS12P58397 1594 aa12.5□□□□□ -0.41
LETMD1-236ENST00000553043 TSPOAP1O95153 1857 aa12.48□□□□□ -0.41
LETMD1-236ENST00000553043 ADCY10Q96PN6 1610 aa12.44□□□□□ -0.42
LETMD1-236ENST00000553043 WRNQ14191 1432 aaPredicted RBP eCLIP12.44□□□□□ -0.42
LETMD1-236ENST00000553043 TTBK1Q5TCY1 1321 aaPredicted RBP12.42□□□□□ -0.42
LETMD1-236ENST00000553043 LMTK3Q96Q04 1460 aa12.42□□□□□ -0.42
LETMD1-236ENST00000553043 COL17A1Q9UMD9 1497 aaPredicted RBP12.4□□□□□ -0.42
LETMD1-236ENST00000553043 ERICH3Q5RHP9 1530 aa12.37□□□□□ -0.43
LETMD1-236ENST00000553043 PTPRGP23470 1445 aa12.34□□□□□ -0.43
LETMD1-236ENST00000553043 ASXL2Q76L83 1435 aa12.34□□□□□ -0.43
LETMD1-236ENST00000553043 RUSC2Q8N2Y8 1516 aa12.33□□□□□ -0.44
LETMD1-236ENST00000553043 ILDR2Q71H61 639 aa12.33□□□□□ -0.44
LETMD1-236ENST00000553043 SOCS7O14512 581 aa12.32□□□□□ -0.44
LETMD1-236ENST00000553043 PLB1Q6P1J6 1458 aa12.31□□□□□ -0.44
LETMD1-236ENST00000553043 PPRC1Q5VV67 1664 aaKnown RBP12.3□□□□□ -0.44
LETMD1-236ENST00000553043 ABCC2Q92887 1545 aa12.29□□□□□ -0.44
LETMD1-236ENST00000553043 GLI2P10070 1586 aa12.29□□□□□ -0.44
LETMD1-236ENST00000553043 DISP3Q9P2K9 1392 aa12.28□□□□□ -0.44
LETMD1-236ENST00000553043 KIAA0586Q9BVV6 1533 aa12.27□□□□□ -0.44
LETMD1-236ENST00000553043 TOP2BQ02880 1626 aa12.27□□□□□ -0.44
LETMD1-236ENST00000553043 TEX14Q8IWB6 1497 aa12.26□□□□□ -0.45
LETMD1-236ENST00000553043 EPRSP07814 1512 aaKnown RBP12.24□□□□□ -0.45
LETMD1-236ENST00000553043 TNIKQ9UKE5 1360 aa12.23□□□□□ -0.45
LETMD1-236ENST00000553043 CARMIL2Q6F5E8 1435 aa12.2□□□□□ -0.46
LETMD1-236ENST00000553043 BIVM-ERCC5R4GMW8 1640 aa12.19□□□□□ -0.46
LETMD1-236ENST00000553043 UACAQ9BZF9 1416 aa12.19□□□□□ -0.46
LETMD1-236ENST00000553043 MAP3K4Q9Y6R4 1608 aa12.19□□□□□ -0.46
LETMD1-236ENST00000553043 UHRF1BP1LA0JNW5 1464 aa12.17□□□□□ -0.46
LETMD1-236ENST00000553043 PTPRMP28827 1452 aa12.17□□□□□ -0.46
LETMD1-236ENST00000553043 CERKQ8TCT0 537 aa12.17□□□□□ -0.46
LETMD1-236ENST00000553043 CUL7Q14999 1698 aa12.16□□□□□ -0.46
LETMD1-236ENST00000553043 IGF1RP08069 1367 aa12.16□□□□□ -0.46
LETMD1-236ENST00000553043 HSPA2P54652 639 aa12.14□□□□□ -0.47
LETMD1-236ENST00000553043 KCNH8Q96L42 1107 aa12.14□□□□□ -0.47
LETMD1-236ENST00000553043 KDM5BQ9UGL1 1544 aa12.14□□□□□ -0.47
LETMD1-236ENST00000553043 CD109Q6YHK3 1445 aa12.12□□□□□ -0.47
LETMD1-236ENST00000553043 KIF21BO75037 1637 aa12.12□□□□□ -0.47
LETMD1-236ENST00000553043 PCF11O94913 1555 aaKnown RBP12.11□□□□□ -0.47
LETMD1-236ENST00000553043 WDR7Q9Y4E6 1490 aa12.09□□□□□ -0.47
LETMD1-236ENST00000553043 PLPPR3Q6T4P5 718 aa12.09□□□□□ -0.47
LETMD1-236ENST00000553043 MAGI3Q5TCQ9 1506 aa12.09□□□□□ -0.47
LETMD1-236ENST00000553043 ARID4BQ4LE39 1312 aaPredicted RBP12.09□□□□□ -0.47
LETMD1-236ENST00000553043 SUPT5HO00267 1087 aaKnown RBP12.07□□□□□ -0.48
LETMD1-236ENST00000553043 ZCCHC11Q5TAX3 1644 aaKnown RBP12.07□□□□□ -0.48
LETMD1-236ENST00000553043 CARMIL1Q5VZK9 1371 aa12.06□□□□□ -0.48
LETMD1-236ENST00000553043 DISP1Q96F81 1524 aa12.06□□□□□ -0.48
LETMD1-236ENST00000553043 KIF27Q86VH2 1401 aa12.05□□□□□ -0.48
LETMD1-236ENST00000553043 ADAMTSL3P82987 1691 aa12.04□□□□□ -0.48
LETMD1-236ENST00000553043 RAPGEF3O95398 923 aa12.03□□□□□ -0.48
LETMD1-236ENST00000553043 IQGAP2Q13576 1575 aa12.03□□□□□ -0.48
LETMD1-236ENST00000553043 ARAP3Q8WWN8 1544 aa12.01□□□□□ -0.49
LETMD1-236ENST00000553043 SPATA31D1Q6ZQQ2 1576 aa12.01□□□□□ -0.49
LETMD1-236ENST00000553043 MADDQ8WXG6 1647 aa11.99□□□□□ -0.49
LETMD1-236ENST00000553043 CFAP43Q8NDM7 1665 aa11.98□□□□□ -0.49
LETMD1-236ENST00000553043 ARID3CA6NKF2 412 aa11.96□□□□□ -0.49
LETMD1-236ENST00000553043 BCORL1Q5H9F3 1711 aa11.95□□□□□ -0.5
LETMD1-236ENST00000553043 UGGT2Q9NYU1 1516 aa11.93□□□□□ -0.5
LETMD1-236ENST00000553043 KIAA0556O60303 1618 aa11.93□□□□□ -0.5
LETMD1-236ENST00000553043 PHLDB1Q86UU1 1377 aa11.92□□□□□ -0.5
LETMD1-236ENST00000553043 RIMS1Q86UR5 1692 aaKnown RBP11.92□□□□□ -0.5
LETMD1-236ENST00000553043 MLECQ14165 292 aa11.91□□□□□ -0.5
LETMD1-236ENST00000553043 DMRT2Q9Y5R5 561 aa11.9□□□□□ -0.5
LETMD1-236ENST00000553043 YEATS2Q9ULM3 1422 aa11.87□□□□□ -0.51
LETMD1-236ENST00000553043 NEO1Q92859 1461 aa11.86□□□□□ -0.51
LETMD1-236ENST00000553043 ABCA8O94911 1581 aa11.86□□□□□ -0.51
LETMD1-236ENST00000553043 POGZQ7Z3K3 1410 aa11.86□□□□□ -0.51
LETMD1-236ENST00000553043 RAPGEF2Q9Y4G8 1499 aa11.84□□□□□ -0.51
LETMD1-236ENST00000553043 CEBPAP49715 358 aaPredicted RBP11.84□□□□□ -0.51
LETMD1-236ENST00000553043 FRMPD1Q5SYB0 1578 aa11.84□□□□□ -0.51
LETMD1-236ENST00000553043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.83□□□□□ -0.52
LETMD1-236ENST00000553043 HNRNPUL2Q1KMD3 747 aaKnown RBP11.83□□□□□ -0.52
LETMD1-236ENST00000553043 FAM9AQ8IZU1 332 aaPredicted RBP11.82□□□□□ -0.52
LETMD1-236ENST00000553043 FANCAO15360 1455 aa11.82□□□□□ -0.52
LETMD1-236ENST00000553043 ATP10BO94823 1461 aa11.82□□□□□ -0.52
LETMD1-236ENST00000553043 AKNAQ7Z591 1439 aa11.81□□□□□ -0.52
LETMD1-236ENST00000553043 DENND4BO75064 1496 aaPredicted RBP11.81□□□□□ -0.52
LETMD1-236ENST00000553043 GOLGA3Q08378 1498 aa11.81□□□□□ -0.52
LETMD1-236ENST00000553043 ARHGEF40Q8TER5 1519 aa11.81□□□□□ -0.52
LETMD1-236ENST00000553043 ABCA9Q8IUA7 1624 aa11.8□□□□□ -0.52
LETMD1-236ENST00000553043 P3H3Q8IVL6 736 aa11.8□□□□□ -0.52
LETMD1-236ENST00000553043 FHOD3Q2V2M9 1422 aa11.77□□□□□ -0.53
LETMD1-236ENST00000553043 UBAP1LF5GYI3 381 aa11.76□□□□□ -0.53
LETMD1-236ENST00000553043 PTPRTO14522 1441 aa11.76□□□□□ -0.53
LETMD1-236ENST00000553043 UHRF1BP1Q6BDS2 1440 aa11.76□□□□□ -0.53
LETMD1-236ENST00000553043 TTC37Q6PGP7 1564 aa11.75□□□□□ -0.53
LETMD1-236ENST00000553043 STRCQ7RTU9 1775 aa11.74□□□□□ -0.53
LETMD1-236ENST00000553043 CHIC1Q5VXU3 224 aa11.74□□□□□ -0.53
LETMD1-236ENST00000553043 LTBP4Q8N2S1 1624 aa11.74□□□□□ -0.53
LETMD1-236ENST00000553043 ZFYVE16Q7Z3T8 1539 aa11.73□□□□□ -0.53
LETMD1-236ENST00000553043 SIGLEC1Q9BZZ2 1709 aa11.73□□□□□ -0.53
LETMD1-236ENST00000553043 PREX1Q8TCU6 1659 aa11.72□□□□□ -0.53
LETMD1-236ENST00000553043 IQSEC2Q5JU85 1478 aa11.71□□□□□ -0.53
LETMD1-236ENST00000553043 FER1L4A9Z1Z3 1794 aa11.71□□□□□ -0.54
LETMD1-236ENST00000553043 EFCAB5A4FU69 1503 aa11.7□□□□□ -0.54
LETMD1-236ENST00000553043 ARHGEF12Q9NZN5 1544 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms