RNA–Protein interactions for RNA: ENST00000552888.1

NUBPL-213, Transcript of nucleotide binding protein like, humanhuman

TSL 2

Gene NUBPL, Length 5,032 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUBPL-213ENST00000552888 HNRNPUQ00839 825 aaKnown RBP eCLIP13.23□□□□□ -0.29
NUBPL-213ENST00000552888 CCDC88BA6NC98 1476 aa13.23□□□□□ -0.29
NUBPL-213ENST00000552888 VPS8Q8N3P4 1428 aa13.23□□□□□ -0.29
NUBPL-213ENST00000552888 PEG3Q9GZU2 1588 aa13.23□□□□□ -0.29
NUBPL-213ENST00000552888 WIZO95785 1651 aa13.21□□□□□ -0.29
NUBPL-213ENST00000552888 TMC1Q8TDI8 760 aa13.21□□□□□ -0.29
NUBPL-213ENST00000552888 CARMIL1Q5VZK9 1371 aa13.2□□□□□ -0.3
NUBPL-213ENST00000552888 CDCA8Q53HL2 280 aa13.2□□□□□ -0.3
NUBPL-213ENST00000552888 CHIC2Q9UKJ5 165 aa13.19□□□□□ -0.3
NUBPL-213ENST00000552888 CCNB3Q8WWL7 1395 aa13.19□□□□□ -0.3
NUBPL-213ENST00000552888 SLC24A1O60721 1099 aa13.19□□□□□ -0.3
NUBPL-213ENST00000552888 FKBP8Q14318 412 aa13.18□□□□□ -0.3
NUBPL-213ENST00000552888 UPF2Q9HAU5 1272 aaKnown RBP13.17□□□□□ -0.3
NUBPL-213ENST00000552888 CUX2O14529 1486 aa13.17□□□□□ -0.3
NUBPL-213ENST00000552888 STAG3Q9UJ98 1225 aa13.17□□□□□ -0.3
NUBPL-213ENST00000552888 WDR43Q15061 677 aaKnown RBP eCLIP13.15□□□□□ -0.3
NUBPL-213ENST00000552888 MRS2Q9HD23 443 aa13.15□□□□□ -0.3
NUBPL-213ENST00000552888 PDS5BQ9NTI5 1447 aa13.14□□□□□ -0.31
NUBPL-213ENST00000552888 CFDP1Q9UEE9 299 aaPredicted RBP13.14□□□□□ -0.31
NUBPL-213ENST00000552888 FMN1Q68DA7 1419 aa13.12□□□□□ -0.31
NUBPL-213ENST00000552888 FAM9BQ8IZU0 186 aa13.12□□□□□ -0.31
NUBPL-213ENST00000552888 SOGA1O94964 1423 aa13.12□□□□□ -0.31
NUBPL-213ENST00000552888 CHGAP10645 457 aaKnown RBP13.11□□□□□ -0.31
NUBPL-213ENST00000552888 ARHGAP35Q9NRY4 1499 aa13.1□□□□□ -0.31
NUBPL-213ENST00000552888 MIER1Q8N108 512 aa13.09□□□□□ -0.31
NUBPL-213ENST00000552888 RRP7BPQ9NSQ0 103 aa13.09□□□□□ -0.31
NUBPL-213ENST00000552888 CCDC136Q96JN2 1154 aa13.09□□□□□ -0.31
NUBPL-213ENST00000552888 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.09□□□□□ -0.31
NUBPL-213ENST00000552888 ERCC6Q03468 1493 aa13.09□□□□□ -0.31
NUBPL-213ENST00000552888 EIF5BO60841 1220 aaKnown RBP13.07□□□□□ -0.32
NUBPL-213ENST00000552888 SETD5Q9C0A6 1442 aa13.07□□□□□ -0.32
NUBPL-213ENST00000552888 ABCC8Q09428 1581 aa13.06□□□□□ -0.32
NUBPL-213ENST00000552888 CARMIL2Q6F5E8 1435 aa13.05□□□□□ -0.32
NUBPL-213ENST00000552888 ANP32BQ92688 251 aaKnown RBP13.03□□□□□ -0.32
NUBPL-213ENST00000552888 CADPSQ9ULU8 1353 aa13.02□□□□□ -0.33
NUBPL-213ENST00000552888 CC2D2AQ9P2K1 1620 aa13.02□□□□□ -0.33
NUBPL-213ENST00000552888 KDM2AQ9Y2K7 1162 aa13.01□□□□□ -0.33
NUBPL-213ENST00000552888 RAPGEF2Q9Y4G8 1499 aa13.01□□□□□ -0.33
NUBPL-213ENST00000552888 CFAP53Q96M91 514 aa13.01□□□□□ -0.33
NUBPL-213ENST00000552888 CCER2I3L3R5 266 aa13.01□□□□□ -0.33
NUBPL-213ENST00000552888 DDRGK1Q96HY6 314 aa12.99□□□□□ -0.33
NUBPL-213ENST00000552888 KANK1Q14678 1352 aa12.98□□□□□ -0.33
NUBPL-213ENST00000552888 CARD11Q9BXL7 1154 aa12.97□□□□□ -0.33
NUBPL-213ENST00000552888 KNSTRNQ9Y448 316 aa12.96□□□□□ -0.33
NUBPL-213ENST00000552888 HSP90AA1P07900 732 aaKnown RBP12.96□□□□□ -0.33
NUBPL-213ENST00000552888 MYH16Q9H6N6 1097 aa12.96□□□□□ -0.34
NUBPL-213ENST00000552888 ANP32EQ9BTT0 268 aa12.95□□□□□ -0.34
NUBPL-213ENST00000552888 NPM2Q86SE8 214 aaKnown RBP12.94□□□□□ -0.34
NUBPL-213ENST00000552888 ERICH6BQ5W0A0 696 aa12.94□□□□□ -0.34
NUBPL-213ENST00000552888 CHMP4BQ9H444 224 aaKnown RBP12.94□□□□□ -0.34
NUBPL-213ENST00000552888 SCAF1Q9H7N4 1312 aaKnown RBP12.93□□□□□ -0.34
NUBPL-213ENST00000552888 RSPH4AQ5TD94 716 aa12.92□□□□□ -0.34
NUBPL-213ENST00000552888 MS4A1P11836 297 aa12.91□□□□□ -0.34
NUBPL-213ENST00000552888 KCNH8Q96L42 1107 aa12.91□□□□□ -0.34
NUBPL-213ENST00000552888 BECN1Q14457 450 aa12.91□□□□□ -0.34
NUBPL-213ENST00000552888 CCDC18Q5T9S5 1454 aa12.91□□□□□ -0.34
NUBPL-213ENST00000552888 PNNQ9H307 717 aaKnown RBP12.9□□□□□ -0.34
NUBPL-213ENST00000552888 CFTRP13569 1480 aa12.9□□□□□ -0.34
NUBPL-213ENST00000552888 PPP1R15AO75807 674 aaPredicted RBP12.89□□□□□ -0.35
NUBPL-213ENST00000552888 ANKRD30AQ9BXX3 1397 aa12.89□□□□□ -0.35
NUBPL-213ENST00000552888 LAMC3Q9Y6N6 1575 aa12.89□□□□□ -0.35
NUBPL-213ENST00000552888 TMF1P82094 1093 aa12.88□□□□□ -0.35
NUBPL-213ENST00000552888 PPP4R2Q9NY27 417 aa12.88□□□□□ -0.35
NUBPL-213ENST00000552888 NUDCQ9Y266 331 aa12.88□□□□□ -0.35
NUBPL-213ENST00000552888 ARID4BQ4LE39 1312 aaPredicted RBP12.87□□□□□ -0.35
NUBPL-213ENST00000552888 RAB3GAP2Q9H2M9 1393 aa12.86□□□□□ -0.35
NUBPL-213ENST00000552888 HDGFP51858 240 aaKnown RBP12.85□□□□□ -0.35
NUBPL-213ENST00000552888 SIN3AQ96ST3 1273 aa12.84□□□□□ -0.35
NUBPL-213ENST00000552888 RGL3Q3MIN7 710 aa12.84□□□□□ -0.35
NUBPL-213ENST00000552888 SALL2Q9Y467 1007 aaPredicted RBP12.83□□□□□ -0.35
NUBPL-213ENST00000552888 ROCK2O75116 1388 aaKnown RBP12.83□□□□□ -0.36
NUBPL-213ENST00000552888 FANCD2Q9BXW9 1451 aa12.83□□□□□ -0.36
NUBPL-213ENST00000552888 HIRIP3Q9BW71 556 aaPredicted RBP12.81□□□□□ -0.36
NUBPL-213ENST00000552888 MAPK8IP3Q9UPT6 1336 aa12.81□□□□□ -0.36
NUBPL-213ENST00000552888 PPM1GO15355 546 aaPredicted RBP12.8□□□□□ -0.36
NUBPL-213ENST00000552888 HAP1P54257 671 aaPredicted RBP12.8□□□□□ -0.36
NUBPL-213ENST00000552888 KANK4Q5T7N3 995 aaPredicted RBP12.8□□□□□ -0.36
NUBPL-213ENST00000552888 EFCAB2Q5VUJ9 269 aa12.8□□□□□ -0.36
NUBPL-213ENST00000552888 RALBP1Q15311 655 aa12.79□□□□□ -0.36
NUBPL-213ENST00000552888 CFAP44Q96MT7 982 aa12.79□□□□□ -0.36
NUBPL-213ENST00000552888 EIF3AQ14152 1382 aaKnown RBP12.79□□□□□ -0.36
NUBPL-213ENST00000552888 TDRD9Q8NDG6 1382 aaKnown RBP12.79□□□□□ -0.36
NUBPL-213ENST00000552888 KTN1Q86UP2 1357 aaKnown RBP12.78□□□□□ -0.36
NUBPL-213ENST00000552888 ERICH3Q5RHP9 1530 aa12.77□□□□□ -0.36
NUBPL-213ENST00000552888 GOLGA6L22H0YM25 854 aa12.77□□□□□ -0.36
NUBPL-213ENST00000552888 KIF21BO75037 1637 aa12.77□□□□□ -0.36
NUBPL-213ENST00000552888 CASC1Q6TDU7 716 aa12.77□□□□□ -0.37
NUBPL-213ENST00000552888 CUX1P39880 1505 aa12.76□□□□□ -0.37
NUBPL-213ENST00000552888 MPHOSPH9Q99550 1183 aa12.76□□□□□ -0.37
NUBPL-213ENST00000552888 DCAF11Q8TEB1 546 aa12.76□□□□□ -0.37
NUBPL-213ENST00000552888 SUPT16HQ9Y5B9 1047 aaKnown RBP12.75□□□□□ -0.37
NUBPL-213ENST00000552888 HSPA5P11021 654 aaKnown RBP12.75□□□□□ -0.37
NUBPL-213ENST00000552888 PKD2Q13563 968 aa12.75□□□□□ -0.37
NUBPL-213ENST00000552888 FHOD3Q2V2M9 1422 aa12.75□□□□□ -0.37
NUBPL-213ENST00000552888 POGKQ9P215 609 aa12.74□□□□□ -0.37
NUBPL-213ENST00000552888 PRDM2Q13029 1718 aa12.74□□□□□ -0.37
NUBPL-213ENST00000552888 PHLDB1Q86UU1 1377 aa12.74□□□□□ -0.37
NUBPL-213ENST00000552888 FTSJ3Q8IY81 847 aaKnown RBP12.74□□□□□ -0.37
NUBPL-213ENST00000552888 BCL11AQ9H165 835 aa12.73□□□□□ -0.37
NUBPL-213ENST00000552888 TOP2BQ02880 1626 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms