RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 JPH4Q96JJ6 628 aa20.87■□□□□ 0.93
SUPT16H-202ENST00000552829 MAPKBP1O60336 1514 aa20.85■□□□□ 0.93
SUPT16H-202ENST00000552829 BIVM-ERCC5R4GMW8 1640 aa20.85■□□□□ 0.93
SUPT16H-202ENST00000552829 TOP2BQ02880 1626 aa20.83■□□□□ 0.93
SUPT16H-202ENST00000552829 DIP2BQ9P265 1576 aa20.83■□□□□ 0.92
SUPT16H-202ENST00000552829 ILDR1Q86SU0 546 aaPredicted RBP20.78■□□□□ 0.92
SUPT16H-202ENST00000552829 ADCY10Q96PN6 1610 aa20.77■□□□□ 0.92
SUPT16H-202ENST00000552829 NPM1P06748 294 aaKnown RBP eCLIP20.76■□□□□ 0.91
SUPT16H-202ENST00000552829 KDM6BO15054 1643 aa20.75■□□□□ 0.91
SUPT16H-202ENST00000552829 RUSC2Q8N2Y8 1516 aa20.75■□□□□ 0.91
SUPT16H-202ENST00000552829 PHF23Q9BUL5 403 aaPredicted RBP20.75■□□□□ 0.91
SUPT16H-202ENST00000552829 TSPOAP1O95153 1857 aa20.7■□□□□ 0.9
SUPT16H-202ENST00000552829 KIAA0586Q9BVV6 1533 aa20.61■□□□□ 0.89
SUPT16H-202ENST00000552829 PPRC1Q5VV67 1664 aaKnown RBP20.55■□□□□ 0.88
SUPT16H-202ENST00000552829 ADGRL1O94910 1474 aa20.52■□□□□ 0.88
SUPT16H-202ENST00000552829 GLI2P10070 1586 aa20.51■□□□□ 0.87
SUPT16H-202ENST00000552829 IGF1RP08069 1367 aa20.51■□□□□ 0.87
SUPT16H-202ENST00000552829 SUPT5HO00267 1087 aaKnown RBP20.51■□□□□ 0.87
SUPT16H-202ENST00000552829 PTPRGP23470 1445 aa20.51■□□□□ 0.87
SUPT16H-202ENST00000552829 ABCC2Q92887 1545 aa20.49■□□□□ 0.87
SUPT16H-202ENST00000552829 PLB1Q6P1J6 1458 aa20.47■□□□□ 0.87
SUPT16H-202ENST00000552829 ASXL2Q76L83 1435 aa20.46■□□□□ 0.87
SUPT16H-202ENST00000552829 COL17A1Q9UMD9 1497 aaPredicted RBP20.46■□□□□ 0.87
SUPT16H-202ENST00000552829 CUL7Q14999 1698 aa20.45■□□□□ 0.86
SUPT16H-202ENST00000552829 TNIKQ9UKE5 1360 aa20.43■□□□□ 0.86
SUPT16H-202ENST00000552829 UHRF1BP1LA0JNW5 1464 aa20.42■□□□□ 0.86
SUPT16H-202ENST00000552829 HECW2Q9P2P5 1572 aa20.42■□□□□ 0.86
SUPT16H-202ENST00000552829 CARMIL2Q6F5E8 1435 aa20.37■□□□□ 0.85
SUPT16H-202ENST00000552829 KIF27Q86VH2 1401 aa20.37■□□□□ 0.85
SUPT16H-202ENST00000552829 MAP3K4Q9Y6R4 1608 aa20.37■□□□□ 0.85
SUPT16H-202ENST00000552829 EPRSP07814 1512 aaKnown RBP20.36■□□□□ 0.85
SUPT16H-202ENST00000552829 UACAQ9BZF9 1416 aa20.34■□□□□ 0.85
SUPT16H-202ENST00000552829 TTBK1Q5TCY1 1321 aaPredicted RBP20.33■□□□□ 0.85
SUPT16H-202ENST00000552829 CARMIL1Q5VZK9 1371 aa20.33■□□□□ 0.84
SUPT16H-202ENST00000552829 KDM5BQ9UGL1 1544 aa20.32■□□□□ 0.84
SUPT16H-202ENST00000552829 IQGAP2Q13576 1575 aa20.3■□□□□ 0.84
SUPT16H-202ENST00000552829 TEX14Q8IWB6 1497 aa20.3■□□□□ 0.84
SUPT16H-202ENST00000552829 DISP1Q96F81 1524 aa20.29■□□□□ 0.84
SUPT16H-202ENST00000552829 ZCCHC11Q5TAX3 1644 aaKnown RBP20.24■□□□□ 0.83
SUPT16H-202ENST00000552829 UGGT2Q9NYU1 1516 aa20.19■□□□□ 0.82
SUPT16H-202ENST00000552829 FBXO41Q8TF61 875 aa20.17■□□□□ 0.82
SUPT16H-202ENST00000552829 WDR7Q9Y4E6 1490 aa20.17■□□□□ 0.82
SUPT16H-202ENST00000552829 MAGI3Q5TCQ9 1506 aa20.15■□□□□ 0.82
SUPT16H-202ENST00000552829 KIAA0556O60303 1618 aa20.13■□□□□ 0.81
SUPT16H-202ENST00000552829 CFAP43Q8NDM7 1665 aa20.11■□□□□ 0.81
SUPT16H-202ENST00000552829 CD109Q6YHK3 1445 aa20.1■□□□□ 0.81
SUPT16H-202ENST00000552829 KIF21BO75037 1637 aa20.07■□□□□ 0.8
SUPT16H-202ENST00000552829 RAPGEF2Q9Y4G8 1499 aa20.06■□□□□ 0.8
SUPT16H-202ENST00000552829 ARAP3Q8WWN8 1544 aa20.02■□□□□ 0.8
SUPT16H-202ENST00000552829 ABCA8O94911 1581 aa20.02■□□□□ 0.8
SUPT16H-202ENST00000552829 ADAMTSL3P82987 1691 aa20.01■□□□□ 0.79
SUPT16H-202ENST00000552829 KCNH8Q96L42 1107 aa20■□□□□ 0.79
SUPT16H-202ENST00000552829 PTPRMP28827 1452 aa19.99■□□□□ 0.79
SUPT16H-202ENST00000552829 GOLGA3Q08378 1498 aa19.92■□□□□ 0.78
SUPT16H-202ENST00000552829 CTTNBP2Q8WZ74 1663 aa19.92■□□□□ 0.78
SUPT16H-202ENST00000552829 PHLDB1Q86UU1 1377 aa19.91■□□□□ 0.78
SUPT16H-202ENST00000552829 PCF11O94913 1555 aaKnown RBP19.88■□□□□ 0.77
SUPT16H-202ENST00000552829 BCORL1Q5H9F3 1711 aa19.88■□□□□ 0.77
SUPT16H-202ENST00000552829 LMTK3Q96Q04 1460 aa19.86■□□□□ 0.77
SUPT16H-202ENST00000552829 ABCA9Q8IUA7 1624 aa19.86■□□□□ 0.77
SUPT16H-202ENST00000552829 SENP3Q9H4L4 574 aaPredicted RBP19.85■□□□□ 0.77
SUPT16H-202ENST00000552829 ATP10BO94823 1461 aa19.85■□□□□ 0.77
SUPT16H-202ENST00000552829 MADDQ8WXG6 1647 aa19.84■□□□□ 0.77
SUPT16H-202ENST00000552829 RAPGEF3O95398 923 aa19.83■□□□□ 0.77
SUPT16H-202ENST00000552829 NEO1Q92859 1461 aa19.81■□□□□ 0.76
SUPT16H-202ENST00000552829 FRMPD1Q5SYB0 1578 aa19.81■□□□□ 0.76
SUPT16H-202ENST00000552829 PRXQ9BXM0 1461 aa19.75■□□□□ 0.75
SUPT16H-202ENST00000552829 RIMS1Q86UR5 1692 aaKnown RBP19.73■□□□□ 0.75
SUPT16H-202ENST00000552829 ARID3CA6NKF2 412 aa19.73■□□□□ 0.75
SUPT16H-202ENST00000552829 ARID4BQ4LE39 1312 aaPredicted RBP19.72■□□□□ 0.75
SUPT16H-202ENST00000552829 ARHGEF40Q8TER5 1519 aa19.71■□□□□ 0.75
SUPT16H-202ENST00000552829 HSPA2P54652 639 aa19.7■□□□□ 0.74
SUPT16H-202ENST00000552829 CERKQ8TCT0 537 aa19.7■□□□□ 0.74
SUPT16H-202ENST00000552829 RICTORQ6R327 1708 aa19.69■□□□□ 0.74
SUPT16H-202ENST00000552829 P3H3Q8IVL6 736 aa19.67■□□□□ 0.74
SUPT16H-202ENST00000552829 FAM9AQ8IZU1 332 aaPredicted RBP19.66■□□□□ 0.74
SUPT16H-202ENST00000552829 FHOD3Q2V2M9 1422 aa19.66■□□□□ 0.74
SUPT16H-202ENST00000552829 RAPGEF6Q8TEU7 1601 aa19.65■□□□□ 0.74
SUPT16H-202ENST00000552829 DENND4BO75064 1496 aaPredicted RBP19.64■□□□□ 0.73
SUPT16H-202ENST00000552829 SAMD9Q5K651 1589 aa19.64■□□□□ 0.73
SUPT16H-202ENST00000552829 SIGLEC1Q9BZZ2 1709 aa19.63■□□□□ 0.73
SUPT16H-202ENST00000552829 AKNAQ7Z591 1439 aa19.61■□□□□ 0.73
SUPT16H-202ENST00000552829 ILDR2Q71H61 639 aa19.61■□□□□ 0.73
SUPT16H-202ENST00000552829 ZMYM4Q5VZL5 1548 aa19.61■□□□□ 0.73
SUPT16H-202ENST00000552829 NUP153P49790 1475 aaKnown RBP19.6■□□□□ 0.73
SUPT16H-202ENST00000552829 POGZQ7Z3K3 1410 aa19.59■□□□□ 0.73
SUPT16H-202ENST00000552829 FANCAO15360 1455 aa19.59■□□□□ 0.73
SUPT16H-202ENST00000552829 SOCS7O14512 581 aa19.58■□□□□ 0.72
SUPT16H-202ENST00000552829 YEATS2Q9ULM3 1422 aa19.57■□□□□ 0.72
SUPT16H-202ENST00000552829 TTC37Q6PGP7 1564 aa19.56■□□□□ 0.72
SUPT16H-202ENST00000552829 MAGI2Q86UL8 1455 aa19.55■□□□□ 0.72
SUPT16H-202ENST00000552829 CFAP74Q9C0B2 1584 aa19.55■□□□□ 0.72
SUPT16H-202ENST00000552829 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.54■□□□□ 0.72
SUPT16H-202ENST00000552829 HNRNPUL2Q1KMD3 747 aaKnown RBP19.54■□□□□ 0.72
SUPT16H-202ENST00000552829 EFCAB5A4FU69 1503 aa19.54■□□□□ 0.72
SUPT16H-202ENST00000552829 ZFYVE16Q7Z3T8 1539 aa19.54■□□□□ 0.72
SUPT16H-202ENST00000552829 FER1L4A9Z1Z3 1794 aa19.54■□□□□ 0.72
SUPT16H-202ENST00000552829 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.53■□□□□ 0.72
SUPT16H-202ENST00000552829 DISP3Q9P2K9 1392 aa19.53■□□□□ 0.72
SUPT16H-202ENST00000552829 PLPPR3Q6T4P5 718 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms