RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 WRNQ14191 1432 aaPredicted RBP eCLIP15.42■□□□□ 0.06
TMEM116-217ENST00000552801 ABCA5Q8WWZ7 1642 aa15.4■□□□□ 0.06
TMEM116-217ENST00000552801 POTEDQ86YR6 584 aa15.39■□□□□ 0.05
TMEM116-217ENST00000552801 KCNA4P22459 653 aa15.35■□□□□ 0.05
TMEM116-217ENST00000552801 TOP2BQ02880 1626 aa15.34■□□□□ 0.05
TMEM116-217ENST00000552801 BIVM-ERCC5R4GMW8 1640 aa15.34■□□□□ 0.05
TMEM116-217ENST00000552801 GRIN2AQ12879 1464 aa15.33■□□□□ 0.05
TMEM116-217ENST00000552801 ADAMTS12P58397 1594 aa15.31■□□□□ 0.04
TMEM116-217ENST00000552801 FHAD1B1AJZ9 1412 aa15.29■□□□□ 0.04
TMEM116-217ENST00000552801 ERICH3Q5RHP9 1530 aa15.26■□□□□ 0.03
TMEM116-217ENST00000552801 CEP170Q5SW79 1584 aa15.25■□□□□ 0.03
TMEM116-217ENST00000552801 NUP160Q12769 1436 aa15.24■□□□□ 0.03
TMEM116-217ENST00000552801 ERCC6L2Q5T890 1561 aa15.21■□□□□ 0.03
TMEM116-217ENST00000552801 SHROOM2Q13796 1616 aa15.18■□□□□ 0.02
TMEM116-217ENST00000552801 NPM1P06748 294 aaKnown RBP eCLIP15.17■□□□□ 0.02
TMEM116-217ENST00000552801 RNF216Q9NWF9 866 aaPredicted RBP15.17■□□□□ 0.02
TMEM116-217ENST00000552801 PRG4Q92954 1404 aaPredicted RBP15.17■□□□□ 0.02
TMEM116-217ENST00000552801 NPM3O75607 178 aaKnown RBP15.16■□□□□ 0.02
TMEM116-217ENST00000552801 JPH4Q96JJ6 628 aa15.16■□□□□ 0.02
TMEM116-217ENST00000552801 HOXD11P31277 338 aaPredicted RBP15.11■□□□□ 0.01
TMEM116-217ENST00000552801 KIF27Q86VH2 1401 aa15.11■□□□□ 0.01
TMEM116-217ENST00000552801 RUSC2Q8N2Y8 1516 aa15.09■□□□□ 0.01
TMEM116-217ENST00000552801 CUL7Q14999 1698 aa15.08■□□□□ 0
TMEM116-217ENST00000552801 KIF13AQ9H1H9 1805 aa15.04■□□□□ -0
TMEM116-217ENST00000552801 FAM69CQ0P6D2 419 aa15.03■□□□□ -0
TMEM116-217ENST00000552801 KIAA0586Q9BVV6 1533 aa15.02■□□□□ -0
TMEM116-217ENST00000552801 TTBK1Q5TCY1 1321 aaPredicted RBP15.02□□□□□ -0.01
TMEM116-217ENST00000552801 IGF1RP08069 1367 aa15.01□□□□□ -0.01
TMEM116-217ENST00000552801 CARMIL1Q5VZK9 1371 aa14.98□□□□□ -0.01
TMEM116-217ENST00000552801 CARMIL2Q6F5E8 1435 aa14.98□□□□□ -0.01
TMEM116-217ENST00000552801 ABCC10Q5T3U5 1492 aa14.96□□□□□ -0.01
TMEM116-217ENST00000552801 MAPKBP1O60336 1514 aa14.96□□□□□ -0.01
TMEM116-217ENST00000552801 ADCY10Q96PN6 1610 aa14.96□□□□□ -0.01
TMEM116-217ENST00000552801 PTPRGP23470 1445 aa14.95□□□□□ -0.02
TMEM116-217ENST00000552801 DIP2BQ9P265 1576 aa14.92□□□□□ -0.02
TMEM116-217ENST00000552801 TSPOAP1O95153 1857 aa14.92□□□□□ -0.02
TMEM116-217ENST00000552801 IQGAP2Q13576 1575 aa14.91□□□□□ -0.02
TMEM116-217ENST00000552801 TNIKQ9UKE5 1360 aa14.9□□□□□ -0.02
TMEM116-217ENST00000552801 DCAF8L1A6NGE4 600 aa14.89□□□□□ -0.03
TMEM116-217ENST00000552801 KDM6BO15054 1643 aa14.89□□□□□ -0.03
TMEM116-217ENST00000552801 ABCC2Q92887 1545 aa14.84□□□□□ -0.03
TMEM116-217ENST00000552801 RAPGEF2Q9Y4G8 1499 aa14.84□□□□□ -0.03
TMEM116-217ENST00000552801 PLB1Q6P1J6 1458 aa14.82□□□□□ -0.04
TMEM116-217ENST00000552801 FAM9AQ8IZU1 332 aaPredicted RBP14.82□□□□□ -0.04
TMEM116-217ENST00000552801 UACAQ9BZF9 1416 aa14.81□□□□□ -0.04
TMEM116-217ENST00000552801 ASXL2Q76L83 1435 aa14.8□□□□□ -0.04
TMEM116-217ENST00000552801 UHRF1BP1LA0JNW5 1464 aa14.78□□□□□ -0.04
TMEM116-217ENST00000552801 UGGT2Q9NYU1 1516 aa14.76□□□□□ -0.05
TMEM116-217ENST00000552801 DISP1Q96F81 1524 aa14.75□□□□□ -0.05
TMEM116-217ENST00000552801 CTTNBP2Q8WZ74 1663 aa14.75□□□□□ -0.05
TMEM116-217ENST00000552801 KIAA0556O60303 1618 aa14.75□□□□□ -0.05
TMEM116-217ENST00000552801 GLI2P10070 1586 aa14.74□□□□□ -0.05
TMEM116-217ENST00000552801 GOLGA3Q08378 1498 aa14.73□□□□□ -0.05
TMEM116-217ENST00000552801 ZCCHC11Q5TAX3 1644 aaKnown RBP14.72□□□□□ -0.05
TMEM116-217ENST00000552801 TEX14Q8IWB6 1497 aa14.72□□□□□ -0.05
TMEM116-217ENST00000552801 KDM5BQ9UGL1 1544 aa14.71□□□□□ -0.06
TMEM116-217ENST00000552801 EPRSP07814 1512 aaKnown RBP14.69□□□□□ -0.06
TMEM116-217ENST00000552801 MAP3K4Q9Y6R4 1608 aa14.67□□□□□ -0.06
TMEM116-217ENST00000552801 PPRC1Q5VV67 1664 aaKnown RBP14.67□□□□□ -0.06
TMEM116-217ENST00000552801 KDM4FA0A1W2PPD8 638 aa14.66□□□□□ -0.06
TMEM116-217ENST00000552801 WDR7Q9Y4E6 1490 aa14.66□□□□□ -0.06
TMEM116-217ENST00000552801 KCNH8Q96L42 1107 aa14.65□□□□□ -0.06
TMEM116-217ENST00000552801 SLC4A1APQ9BWU0 796 aaKnown RBP14.62□□□□□ -0.07
TMEM116-217ENST00000552801 ADGRL1O94910 1474 aa14.6□□□□□ -0.07
TMEM116-217ENST00000552801 PRXQ9BXM0 1461 aa14.6□□□□□ -0.07
TMEM116-217ENST00000552801 P3H3Q8IVL6 736 aa14.6□□□□□ -0.07
TMEM116-217ENST00000552801 CD109Q6YHK3 1445 aa14.59□□□□□ -0.07
TMEM116-217ENST00000552801 CFAP43Q8NDM7 1665 aa14.59□□□□□ -0.07
TMEM116-217ENST00000552801 ARID3CA6NKF2 412 aa14.59□□□□□ -0.07
TMEM116-217ENST00000552801 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.59□□□□□ -0.07
TMEM116-217ENST00000552801 HNRNPUL2Q1KMD3 747 aaKnown RBP14.59□□□□□ -0.07
TMEM116-217ENST00000552801 ABCA8O94911 1581 aa14.59□□□□□ -0.07
TMEM116-217ENST00000552801 RANGAP1P46060 587 aaPredicted RBP14.55□□□□□ -0.08
TMEM116-217ENST00000552801 CSRNP3Q8WYN3 585 aa14.55□□□□□ -0.08
TMEM116-217ENST00000552801 COL17A1Q9UMD9 1497 aaPredicted RBP14.54□□□□□ -0.08
TMEM116-217ENST00000552801 MAGI3Q5TCQ9 1506 aa14.54□□□□□ -0.08
TMEM116-217ENST00000552801 EEA1Q15075 1411 aa14.49□□□□□ -0.09
TMEM116-217ENST00000552801 RAPGEF6Q8TEU7 1601 aa14.48□□□□□ -0.09
TMEM116-217ENST00000552801 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.47□□□□□ -0.09
TMEM116-217ENST00000552801 ATP10BO94823 1461 aa14.47□□□□□ -0.09
TMEM116-217ENST00000552801 SAMD9Q5K651 1589 aa14.46□□□□□ -0.1
TMEM116-217ENST00000552801 PHLDB1Q86UU1 1377 aa14.45□□□□□ -0.1
TMEM116-217ENST00000552801 KIF21BO75037 1637 aa14.43□□□□□ -0.1
TMEM116-217ENST00000552801 ABCA9Q8IUA7 1624 aa14.43□□□□□ -0.1
TMEM116-217ENST00000552801 ARAP3Q8WWN8 1544 aa14.42□□□□□ -0.1
TMEM116-217ENST00000552801 PLEKHD1A6NEE1 506 aa14.42□□□□□ -0.1
TMEM116-217ENST00000552801 HECW2Q9P2P5 1572 aa14.41□□□□□ -0.1
TMEM116-217ENST00000552801 ARID4BQ4LE39 1312 aaPredicted RBP14.41□□□□□ -0.1
TMEM116-217ENST00000552801 FHOD3Q2V2M9 1422 aa14.4□□□□□ -0.1
TMEM116-217ENST00000552801 NEO1Q92859 1461 aa14.39□□□□□ -0.11
TMEM116-217ENST00000552801 RAPGEF3O95398 923 aa14.37□□□□□ -0.11
TMEM116-217ENST00000552801 UBTFP17480 764 aaKnown RBP14.37□□□□□ -0.11
TMEM116-217ENST00000552801 ATP1B4Q9UN42 357 aaPredicted RBP14.37□□□□□ -0.11
TMEM116-217ENST00000552801 EFCAB5A4FU69 1503 aa14.37□□□□□ -0.11
TMEM116-217ENST00000552801 NUP153P49790 1475 aaKnown RBP14.36□□□□□ -0.11
TMEM116-217ENST00000552801 EHMT2Q96KQ7 1210 aa14.36□□□□□ -0.11
TMEM116-217ENST00000552801 CFAP74Q9C0B2 1584 aa14.34□□□□□ -0.11
TMEM116-217ENST00000552801 SLC4A2P04920 1241 aa14.34□□□□□ -0.11
TMEM116-217ENST00000552801 ILDR1Q86SU0 546 aaPredicted RBP14.34□□□□□ -0.11
TMEM116-217ENST00000552801 DENND4BO75064 1496 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms