RNA–Protein interactions for RNA: ENST00000552742.5

PFDN5-218, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-218ENST00000552742 ERCC6L2Q5T890 1561 aa16.51■□□□□ 0.23
PFDN5-218ENST00000552742 SHROOM2Q13796 1616 aa16.49■□□□□ 0.23
PFDN5-218ENST00000552742 RAPGEF2Q9Y4G8 1499 aa16.48■□□□□ 0.23
PFDN5-218ENST00000552742 KIAA0586Q9BVV6 1533 aa16.47■□□□□ 0.23
PFDN5-218ENST00000552742 FAM9AQ8IZU1 332 aaPredicted RBP16.47■□□□□ 0.23
PFDN5-218ENST00000552742 CSRNP3Q8WYN3 585 aa16.47■□□□□ 0.23
PFDN5-218ENST00000552742 PRG4Q92954 1404 aaPredicted RBP16.46■□□□□ 0.23
PFDN5-218ENST00000552742 PRXQ9BXM0 1461 aa16.42■□□□□ 0.22
PFDN5-218ENST00000552742 EEA1Q15075 1411 aa16.38■□□□□ 0.21
PFDN5-218ENST00000552742 IQGAP2Q13576 1575 aa16.36■□□□□ 0.21
PFDN5-218ENST00000552742 TTBK1Q5TCY1 1321 aaPredicted RBP16.33■□□□□ 0.2
PFDN5-218ENST00000552742 CTTNBP2Q8WZ74 1663 aa16.31■□□□□ 0.2
PFDN5-218ENST00000552742 CARMIL2Q6F5E8 1435 aa16.3■□□□□ 0.2
PFDN5-218ENST00000552742 EHMT2Q96KQ7 1210 aa16.28■□□□□ 0.2
PFDN5-218ENST00000552742 UGGT2Q9NYU1 1516 aa16.28■□□□□ 0.2
PFDN5-218ENST00000552742 PTPRGP23470 1445 aa16.28■□□□□ 0.2
PFDN5-218ENST00000552742 DISP1Q96F81 1524 aa16.27■□□□□ 0.2
PFDN5-218ENST00000552742 TRHP20396 242 aaPredicted RBP16.26■□□□□ 0.19
PFDN5-218ENST00000552742 TNIKQ9UKE5 1360 aa16.26■□□□□ 0.19
PFDN5-218ENST00000552742 KIF21BO75037 1637 aa16.23■□□□□ 0.19
PFDN5-218ENST00000552742 RANGAP1P46060 587 aaPredicted RBP16.21■□□□□ 0.19
PFDN5-218ENST00000552742 NPM1P06748 294 aaKnown RBP eCLIP16.2■□□□□ 0.18
PFDN5-218ENST00000552742 UBTFP17480 764 aaKnown RBP16.2■□□□□ 0.18
PFDN5-218ENST00000552742 P3H3Q8IVL6 736 aa16.2■□□□□ 0.18
PFDN5-218ENST00000552742 KIAA0556O60303 1618 aa16.19■□□□□ 0.18
PFDN5-218ENST00000552742 ADCY10Q96PN6 1610 aa16.19■□□□□ 0.18
PFDN5-218ENST00000552742 GOLGA3Q08378 1498 aa16.18■□□□□ 0.18
PFDN5-218ENST00000552742 UACAQ9BZF9 1416 aa16.14■□□□□ 0.17
PFDN5-218ENST00000552742 UHRF1BP1LA0JNW5 1464 aa16.1■□□□□ 0.17
PFDN5-218ENST00000552742 SAMD9Q5K651 1589 aa16.09■□□□□ 0.17
PFDN5-218ENST00000552742 PLB1Q6P1J6 1458 aa16.09■□□□□ 0.17
PFDN5-218ENST00000552742 ABCC2Q92887 1545 aa16.09■□□□□ 0.17
PFDN5-218ENST00000552742 MAPKBP1O60336 1514 aa16.05■□□□□ 0.16
PFDN5-218ENST00000552742 FAM69CQ0P6D2 419 aa16.05■□□□□ 0.16
PFDN5-218ENST00000552742 KIF13AQ9H1H9 1805 aa16.05■□□□□ 0.16
PFDN5-218ENST00000552742 ABCA8O94911 1581 aa16.04■□□□□ 0.16
PFDN5-218ENST00000552742 KDM5BQ9UGL1 1544 aa16.04■□□□□ 0.16
PFDN5-218ENST00000552742 FHOD3Q2V2M9 1422 aa16.03■□□□□ 0.16
PFDN5-218ENST00000552742 ARID3CA6NKF2 412 aa16.02■□□□□ 0.16
PFDN5-218ENST00000552742 ABCC10Q5T3U5 1492 aa16.02■□□□□ 0.15
PFDN5-218ENST00000552742 ASXL2Q76L83 1435 aa16.01■□□□□ 0.15
PFDN5-218ENST00000552742 ZCCHC11Q5TAX3 1644 aaKnown RBP16.01■□□□□ 0.15
PFDN5-218ENST00000552742 EFCAB5A4FU69 1503 aa15.99■□□□□ 0.15
PFDN5-218ENST00000552742 DIP2BQ9P265 1576 aa15.97■□□□□ 0.15
PFDN5-218ENST00000552742 ARHGAP35Q9NRY4 1499 aa15.97■□□□□ 0.15
PFDN5-218ENST00000552742 LOC105371045A0A1W2PR82 267 aa15.96■□□□□ 0.15
PFDN5-218ENST00000552742 RAPGEF6Q8TEU7 1601 aa15.96■□□□□ 0.15
PFDN5-218ENST00000552742 ATP10BO94823 1461 aa15.96■□□□□ 0.14
PFDN5-218ENST00000552742 KCNH8Q96L42 1107 aa15.95■□□□□ 0.14
PFDN5-218ENST00000552742 TSPOAP1O95153 1857 aa15.94■□□□□ 0.14
PFDN5-218ENST00000552742 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.93■□□□□ 0.14
PFDN5-218ENST00000552742 HNRNPUL2Q1KMD3 747 aaKnown RBP15.93■□□□□ 0.14
PFDN5-218ENST00000552742 ATP1B4Q9UN42 357 aaPredicted RBP15.92■□□□□ 0.14
PFDN5-218ENST00000552742 NUP153P49790 1475 aaKnown RBP15.91■□□□□ 0.14
PFDN5-218ENST00000552742 EPRSP07814 1512 aaKnown RBP15.9■□□□□ 0.14
PFDN5-218ENST00000552742 WDR7Q9Y4E6 1490 aa15.9■□□□□ 0.14
PFDN5-218ENST00000552742 GLI2P10070 1586 aa15.88■□□□□ 0.13
PFDN5-218ENST00000552742 CLIP1P30622 1438 aa15.88■□□□□ 0.13
PFDN5-218ENST00000552742 FMN1Q68DA7 1419 aa15.87■□□□□ 0.13
PFDN5-218ENST00000552742 PLEKHD1A6NEE1 506 aa15.84■□□□□ 0.13
PFDN5-218ENST00000552742 MAP3K4Q9Y6R4 1608 aa15.82■□□□□ 0.12
PFDN5-218ENST00000552742 CDK13Q14004 1512 aaKnown RBP15.81■□□□□ 0.12
PFDN5-218ENST00000552742 PPRC1Q5VV67 1664 aaKnown RBP15.81■□□□□ 0.12
PFDN5-218ENST00000552742 CEP162Q5TB80 1403 aa15.8■□□□□ 0.12
PFDN5-218ENST00000552742 CD109Q6YHK3 1445 aa15.79■□□□□ 0.12
PFDN5-218ENST00000552742 HECW1Q76N89 1606 aa15.78■□□□□ 0.12
PFDN5-218ENST00000552742 CASKIN1Q8WXD9 1431 aa15.77■□□□□ 0.12
PFDN5-218ENST00000552742 LRRIQ1Q96JM4 1722 aa15.77■□□□□ 0.12
PFDN5-218ENST00000552742 CFAP43Q8NDM7 1665 aa15.77■□□□□ 0.12
PFDN5-218ENST00000552742 CDK11AQ9UQ88 783 aaPredicted RBP15.75■□□□□ 0.11
PFDN5-218ENST00000552742 PCF11O94913 1555 aaKnown RBP15.75■□□□□ 0.11
PFDN5-218ENST00000552742 ABCA9Q8IUA7 1624 aa15.73■□□□□ 0.11
PFDN5-218ENST00000552742 KDM6BO15054 1643 aa15.72■□□□□ 0.11
PFDN5-218ENST00000552742 TEX14Q8IWB6 1497 aa15.72■□□□□ 0.11
PFDN5-218ENST00000552742 MAGI3Q5TCQ9 1506 aa15.72■□□□□ 0.11
PFDN5-218ENST00000552742 FYCO1Q9BQS8 1478 aa15.71■□□□□ 0.1
PFDN5-218ENST00000552742 COL17A1Q9UMD9 1497 aaPredicted RBP15.71■□□□□ 0.1
PFDN5-218ENST00000552742 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.68■□□□□ 0.13e-9■□□□□ 10.9
PFDN5-218ENST00000552742 CCDC18Q5T9S5 1454 aa15.67■□□□□ 0.1
PFDN5-218ENST00000552742 TROQ12816 1431 aaPredicted RBP15.67■□□□□ 0.1
PFDN5-218ENST00000552742 TTC37Q6PGP7 1564 aa15.65■□□□□ 0.1
PFDN5-218ENST00000552742 KIF14Q15058 1648 aa15.64■□□□□ 0.09
PFDN5-218ENST00000552742 PHLDB1Q86UU1 1377 aa15.61■□□□□ 0.09
PFDN5-218ENST00000552742 NEO1Q92859 1461 aa15.6■□□□□ 0.09
PFDN5-218ENST00000552742 ARAP3Q8WWN8 1544 aa15.6■□□□□ 0.09
PFDN5-218ENST00000552742 RAPGEF3O95398 923 aa15.6■□□□□ 0.09
PFDN5-218ENST00000552742 PLCH2O75038 1416 aa15.6■□□□□ 0.09
PFDN5-218ENST00000552742 VPS8Q8N3P4 1428 aa15.59■□□□□ 0.09
PFDN5-218ENST00000552742 FANCAO15360 1455 aa15.59■□□□□ 0.09
PFDN5-218ENST00000552742 MYO5CQ9NQX4 1742 aa15.58■□□□□ 0.08
PFDN5-218ENST00000552742 EFCAB2Q5VUJ9 269 aa15.58■□□□□ 0.08
PFDN5-218ENST00000552742 AKNAQ7Z591 1439 aa15.58■□□□□ 0.08
PFDN5-218ENST00000552742 MTUS2Q5JR59 1369 aa15.56■□□□□ 0.08
PFDN5-218ENST00000552742 CDC42BPBQ9Y5S2 1711 aa15.54■□□□□ 0.08
PFDN5-218ENST00000552742 CFAP74Q9C0B2 1584 aa15.53■□□□□ 0.08
PFDN5-218ENST00000552742 ARHGAP5Q13017 1502 aa15.52■□□□□ 0.07
PFDN5-218ENST00000552742 DENND4BO75064 1496 aaPredicted RBP15.52■□□□□ 0.07
PFDN5-218ENST00000552742 CDC42BPAQ5VT25 1732 aa15.51■□□□□ 0.07
PFDN5-218ENST00000552742 SCAPERQ9BY12 1400 aa15.51■□□□□ 0.07
PFDN5-218ENST00000552742 TIAM1Q13009 1591 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms