RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 RANGAP1P46060 587 aaPredicted RBP19.98■□□□□ 0.79
CACNB3-223ENST00000552480 EFCAB5A4FU69 1503 aa19.95■□□□□ 0.78
CACNB3-223ENST00000552480 SYNJ2O15056 1496 aa19.94■□□□□ 0.78
CACNB3-223ENST00000552480 GRIN2AQ12879 1464 aa19.92■□□□□ 0.78
CACNB3-223ENST00000552480 IQGAP2Q13576 1575 aa19.88■□□□□ 0.77
CACNB3-223ENST00000552480 SAMD9Q5K651 1589 aa19.87■□□□□ 0.77
CACNB3-223ENST00000552480 KIAA0586Q9BVV6 1533 aa19.83■□□□□ 0.77
CACNB3-223ENST00000552480 CHMP7Q8WUX9 453 aaPredicted RBP19.82■□□□□ 0.76
CACNB3-223ENST00000552480 TRIM26Q12899 539 aaPredicted RBP19.81■□□□□ 0.76
CACNB3-223ENST00000552480 CEP170Q5SW79 1584 aa19.81■□□□□ 0.76
CACNB3-223ENST00000552480 NUP160Q12769 1436 aa19.79■□□□□ 0.76
CACNB3-223ENST00000552480 FHOD3Q2V2M9 1422 aa19.79■□□□□ 0.76
CACNB3-223ENST00000552480 UGGT2Q9NYU1 1516 aa19.79■□□□□ 0.76
CACNB3-223ENST00000552480 APLP2Q06481 763 aa19.75■□□□□ 0.75
CACNB3-223ENST00000552480 PPARGC1BQ86YN6 1023 aaKnown RBP19.74■□□□□ 0.75
CACNB3-223ENST00000552480 CHD1O14646 1710 aa19.73■□□□□ 0.75
CACNB3-223ENST00000552480 FBLN2P98095 1184 aa19.73■□□□□ 0.75
CACNB3-223ENST00000552480 P3H3Q8IVL6 736 aa19.73■□□□□ 0.75
CACNB3-223ENST00000552480 PCGF6Q9BYE7 350 aa19.73■□□□□ 0.75
CACNB3-223ENST00000552480 FMN1Q68DA7 1419 aa19.73■□□□□ 0.75
CACNB3-223ENST00000552480 PCF11O94913 1555 aaKnown RBP19.73■□□□□ 0.75
CACNB3-223ENST00000552480 FYCO1Q9BQS8 1478 aa19.7■□□□□ 0.74
CACNB3-223ENST00000552480 MAP3K1Q13233 1512 aa19.7■□□□□ 0.74
CACNB3-223ENST00000552480 CASKIN1Q8WXD9 1431 aa19.69■□□□□ 0.74
CACNB3-223ENST00000552480 KIAA0556O60303 1618 aa19.69■□□□□ 0.74
CACNB3-223ENST00000552480 DISP1Q96F81 1524 aa19.66■□□□□ 0.74
CACNB3-223ENST00000552480 TIAM1Q13009 1591 aa19.66■□□□□ 0.74
CACNB3-223ENST00000552480 CFAP43Q8NDM7 1665 aa19.65■□□□□ 0.74
CACNB3-223ENST00000552480 TTBK1Q5TCY1 1321 aaPredicted RBP19.59■□□□□ 0.73
CACNB3-223ENST00000552480 CARMIL2Q6F5E8 1435 aa19.58■□□□□ 0.72
CACNB3-223ENST00000552480 JPH4Q96JJ6 628 aa19.57■□□□□ 0.72
CACNB3-223ENST00000552480 HECW1Q76N89 1606 aa19.57■□□□□ 0.72
CACNB3-223ENST00000552480 SHROOM2Q13796 1616 aa19.55■□□□□ 0.72
CACNB3-223ENST00000552480 KANK4Q5T7N3 995 aaPredicted RBP19.55■□□□□ 0.72
CACNB3-223ENST00000552480 LRRC9Q6ZRR7 1453 aa19.54■□□□□ 0.72
CACNB3-223ENST00000552480 LRRIQ1Q96JM4 1722 aa19.54■□□□□ 0.72
CACNB3-223ENST00000552480 CLASP1Q7Z460 1538 aa19.53■□□□□ 0.72
CACNB3-223ENST00000552480 CCDC18Q5T9S5 1454 aa19.52■□□□□ 0.72
CACNB3-223ENST00000552480 ATP1B4Q9UN42 357 aaPredicted RBP19.51■□□□□ 0.71
CACNB3-223ENST00000552480 RAPGEF6Q8TEU7 1601 aa19.49■□□□□ 0.71
CACNB3-223ENST00000552480 PRG4Q92954 1404 aaPredicted RBP19.49■□□□□ 0.71
CACNB3-223ENST00000552480 EPRSP07814 1512 aaKnown RBP19.45■□□□□ 0.7
CACNB3-223ENST00000552480 EHBP1L1Q8N3D4 1523 aa19.42■□□□□ 0.7
CACNB3-223ENST00000552480 NUP153P49790 1475 aaKnown RBP19.41■□□□□ 0.7
CACNB3-223ENST00000552480 ABCA8O94911 1581 aa19.4■□□□□ 0.7
CACNB3-223ENST00000552480 RRBP1Q9P2E9 1410 aaKnown RBP19.4■□□□□ 0.7
CACNB3-223ENST00000552480 MTUS2Q5JR59 1369 aa19.39■□□□□ 0.69
CACNB3-223ENST00000552480 CDK13Q14004 1512 aaKnown RBP19.39■□□□□ 0.69
CACNB3-223ENST00000552480 PLB1Q6P1J6 1458 aa19.38■□□□□ 0.69
CACNB3-223ENST00000552480 SUPT6HQ7KZ85 1726 aaKnown RBP19.36■□□□□ 0.69
CACNB3-223ENST00000552480 MAGI3Q5TCQ9 1506 aa19.35■□□□□ 0.69
CACNB3-223ENST00000552480 PTPRGP23470 1445 aa19.35■□□□□ 0.69
CACNB3-223ENST00000552480 ERCC6L2Q5T890 1561 aa19.35■□□□□ 0.69
CACNB3-223ENST00000552480 PHLDB1Q86UU1 1377 aa19.33■□□□□ 0.69
CACNB3-223ENST00000552480 CCNB3Q8WWL7 1395 aa19.32■□□□□ 0.68
CACNB3-223ENST00000552480 ARHGEF11O15085 1522 aa19.3■□□□□ 0.68
CACNB3-223ENST00000552480 NCOA2Q15596 1464 aa19.3■□□□□ 0.68
CACNB3-223ENST00000552480 OSCARQ8IYS5 282 aa19.27■□□□□ 0.68
CACNB3-223ENST00000552480 DNAJC5Q9H3Z4 198 aa19.27■□□□□ 0.68
CACNB3-223ENST00000552480 UACAQ9BZF9 1416 aa19.26■□□□□ 0.67
CACNB3-223ENST00000552480 CDK11AQ9UQ88 783 aaPredicted RBP19.26■□□□□ 0.67
CACNB3-223ENST00000552480 ARID3CA6NKF2 412 aa19.25■□□□□ 0.67
CACNB3-223ENST00000552480 ABCC2Q92887 1545 aa19.24■□□□□ 0.67
CACNB3-223ENST00000552480 MYOM3Q5VTT5 1437 aa19.24■□□□□ 0.67
CACNB3-223ENST00000552480 ATP10BO94823 1461 aa19.23■□□□□ 0.67
CACNB3-223ENST00000552480 TROQ12816 1431 aaPredicted RBP19.23■□□□□ 0.67
CACNB3-223ENST00000552480 FGD6Q6ZV73 1430 aa19.23■□□□□ 0.67
CACNB3-223ENST00000552480 ADCY10Q96PN6 1610 aa19.22■□□□□ 0.67
CACNB3-223ENST00000552480 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.22■□□□□ 0.67
CACNB3-223ENST00000552480 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.21■□□□□ 0.67
CACNB3-223ENST00000552480 HNRNPUL2Q1KMD3 747 aaKnown RBP19.21■□□□□ 0.67
CACNB3-223ENST00000552480 UHRF1BP1LA0JNW5 1464 aa19.2■□□□□ 0.66
CACNB3-223ENST00000552480 HRCP23327 699 aa19.18■□□□□ 0.66
CACNB3-223ENST00000552480 PTPN23Q9H3S7 1636 aa19.14■□□□□ 0.66
CACNB3-223ENST00000552480 MIA2Q96PC5 1412 aa19.14■□□□□ 0.65
CACNB3-223ENST00000552480 TCOF1Q13428 1488 aaKnown RBP19.14■□□□□ 0.65
CACNB3-223ENST00000552480 KIF14Q15058 1648 aa19.14■□□□□ 0.65
CACNB3-223ENST00000552480 PLEKHD1A6NEE1 506 aa19.13■□□□□ 0.65
CACNB3-223ENST00000552480 FAM50AQ14320 339 aaKnown RBP19.13■□□□□ 0.65
CACNB3-223ENST00000552480 ITSN2Q9NZM3 1697 aa19.11■□□□□ 0.65
CACNB3-223ENST00000552480 ZCCHC11Q5TAX3 1644 aaKnown RBP19.11■□□□□ 0.65
CACNB3-223ENST00000552480 KDM5BQ9UGL1 1544 aa19.1■□□□□ 0.65
CACNB3-223ENST00000552480 ABCC10Q5T3U5 1492 aa19.07■□□□□ 0.64
CACNB3-223ENST00000552480 ITGAEP38570 1179 aa19.05■□□□□ 0.64
CACNB3-223ENST00000552480 GPATCH8Q9UKJ3 1502 aaKnown RBP19.05■□□□□ 0.64
CACNB3-223ENST00000552480 ZEB1P37275 1124 aaPredicted RBP19.02■□□□□ 0.64
CACNB3-223ENST00000552480 CDC42BPAQ5VT25 1732 aa19.02■□□□□ 0.63
CACNB3-223ENST00000552480 CCER1Q8TC90 406 aaPredicted RBP19■□□□□ 0.63
CACNB3-223ENST00000552480 SETD5Q9C0A6 1442 aa18.98■□□□□ 0.63
CACNB3-223ENST00000552480 CAMSAP2Q08AD1 1489 aa18.97■□□□□ 0.63
CACNB3-223ENST00000552480 PREX2Q70Z35 1606 aa18.97■□□□□ 0.63
CACNB3-223ENST00000552480 PTPRKQ15262 1439 aa18.97■□□□□ 0.63
CACNB3-223ENST00000552480 DNMT1P26358 1616 aaKnown RBP18.96■□□□□ 0.63
CACNB3-223ENST00000552480 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.96■□□□□ 0.63
CACNB3-223ENST00000552480 CFDP1Q9UEE9 299 aaPredicted RBP18.96■□□□□ 0.63
CACNB3-223ENST00000552480 TTC37Q6PGP7 1564 aa18.95■□□□□ 0.62
CACNB3-223ENST00000552480 WDR7Q9Y4E6 1490 aa18.93■□□□□ 0.62
CACNB3-223ENST00000552480 RAB3GAP2Q9H2M9 1393 aa18.93■□□□□ 0.62
CACNB3-223ENST00000552480 HFM1A2PYH4 1435 aa18.92■□□□□ 0.62
CACNB3-223ENST00000552480 DAPK1P53355 1430 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms