RNA–Protein interactions for RNA: ENST00000552022.5

CACNB3-221, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 564 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-221ENST00000552022 DIP2BQ9P265 1576 aa23.31■■□□□ 1.32
CACNB3-221ENST00000552022 MAPKBP1O60336 1514 aa23.31■■□□□ 1.32
CACNB3-221ENST00000552022 ERICH3Q5RHP9 1530 aa23.31■■□□□ 1.32
CACNB3-221ENST00000552022 NPM1P06748 294 aaKnown RBP eCLIP23.29■■□□□ 1.32
CACNB3-221ENST00000552022 KDM6BO15054 1643 aa23.28■■□□□ 1.32
CACNB3-221ENST00000552022 BIVM-ERCC5R4GMW8 1640 aa23.27■■□□□ 1.32
CACNB3-221ENST00000552022 TOP2BQ02880 1626 aa23.26■■□□□ 1.31
CACNB3-221ENST00000552022 TSPOAP1O95153 1857 aa23.26■■□□□ 1.31
CACNB3-221ENST00000552022 ADCY10Q96PN6 1610 aa23.25■■□□□ 1.31
CACNB3-221ENST00000552022 RUSC2Q8N2Y8 1516 aa23.21■■□□□ 1.31
CACNB3-221ENST00000552022 KIAA0586Q9BVV6 1533 aa23.02■■□□□ 1.28
CACNB3-221ENST00000552022 ADGRL1O94910 1474 aa23.01■■□□□ 1.27
CACNB3-221ENST00000552022 PPRC1Q5VV67 1664 aaKnown RBP23■■□□□ 1.27
CACNB3-221ENST00000552022 SUPT5HO00267 1087 aaKnown RBP22.97■■□□□ 1.27
CACNB3-221ENST00000552022 PTPRGP23470 1445 aa22.93■■□□□ 1.26
CACNB3-221ENST00000552022 GLI2P10070 1586 aa22.93■■□□□ 1.26
CACNB3-221ENST00000552022 HECW2Q9P2P5 1572 aa22.92■■□□□ 1.26
CACNB3-221ENST00000552022 ABCC2Q92887 1545 aa22.9■■□□□ 1.26
CACNB3-221ENST00000552022 COL17A1Q9UMD9 1497 aaPredicted RBP22.9■■□□□ 1.26
CACNB3-221ENST00000552022 ASXL2Q76L83 1435 aa22.9■■□□□ 1.26
CACNB3-221ENST00000552022 TTBK1Q5TCY1 1321 aaPredicted RBP22.89■■□□□ 1.26
CACNB3-221ENST00000552022 IGF1RP08069 1367 aa22.89■■□□□ 1.25
CACNB3-221ENST00000552022 PLB1Q6P1J6 1458 aa22.87■■□□□ 1.25
CACNB3-221ENST00000552022 CUL7Q14999 1698 aa22.85■■□□□ 1.25
CACNB3-221ENST00000552022 TNIKQ9UKE5 1360 aa22.83■■□□□ 1.25
CACNB3-221ENST00000552022 MAP3K4Q9Y6R4 1608 aa22.79■■□□□ 1.24
CACNB3-221ENST00000552022 UHRF1BP1LA0JNW5 1464 aa22.79■■□□□ 1.24
CACNB3-221ENST00000552022 CARMIL2Q6F5E8 1435 aa22.78■■□□□ 1.24
CACNB3-221ENST00000552022 EPRSP07814 1512 aaKnown RBP22.76■■□□□ 1.23
CACNB3-221ENST00000552022 KIF27Q86VH2 1401 aa22.75■■□□□ 1.23
CACNB3-221ENST00000552022 UACAQ9BZF9 1416 aa22.74■■□□□ 1.23
CACNB3-221ENST00000552022 TEX14Q8IWB6 1497 aa22.72■■□□□ 1.23
CACNB3-221ENST00000552022 CARMIL1Q5VZK9 1371 aa22.7■■□□□ 1.22
CACNB3-221ENST00000552022 KDM5BQ9UGL1 1544 aa22.7■■□□□ 1.22
CACNB3-221ENST00000552022 IQGAP2Q13576 1575 aa22.68■■□□□ 1.22
CACNB3-221ENST00000552022 DISP1Q96F81 1524 aa22.67■■□□□ 1.22
CACNB3-221ENST00000552022 ZCCHC11Q5TAX3 1644 aaKnown RBP22.66■■□□□ 1.22
CACNB3-221ENST00000552022 FBXO41Q8TF61 875 aa22.64■■□□□ 1.21
CACNB3-221ENST00000552022 WDR7Q9Y4E6 1490 aa22.54■■□□□ 1.2
CACNB3-221ENST00000552022 UGGT2Q9NYU1 1516 aa22.53■■□□□ 1.2
CACNB3-221ENST00000552022 KIF21BO75037 1637 aa22.52■■□□□ 1.2
CACNB3-221ENST00000552022 MAGI3Q5TCQ9 1506 aa22.51■■□□□ 1.19
CACNB3-221ENST00000552022 KIAA0556O60303 1618 aa22.5■■□□□ 1.19
CACNB3-221ENST00000552022 CD109Q6YHK3 1445 aa22.5■■□□□ 1.19
CACNB3-221ENST00000552022 CFAP43Q8NDM7 1665 aa22.5■■□□□ 1.19
CACNB3-221ENST00000552022 KCNH8Q96L42 1107 aa22.45■■□□□ 1.18
CACNB3-221ENST00000552022 RAPGEF2Q9Y4G8 1499 aa22.4■■□□□ 1.18
CACNB3-221ENST00000552022 ADAMTSL3P82987 1691 aa22.39■■□□□ 1.17
CACNB3-221ENST00000552022 PTPRMP28827 1452 aa22.38■■□□□ 1.17
CACNB3-221ENST00000552022 ARAP3Q8WWN8 1544 aa22.37■■□□□ 1.17
CACNB3-221ENST00000552022 ABCA8O94911 1581 aa22.35■■□□□ 1.17
CACNB3-221ENST00000552022 CTTNBP2Q8WZ74 1663 aa22.29■■□□□ 1.16
CACNB3-221ENST00000552022 PCF11O94913 1555 aaKnown RBP22.27■■□□□ 1.16
CACNB3-221ENST00000552022 BCORL1Q5H9F3 1711 aa22.26■■□□□ 1.15
CACNB3-221ENST00000552022 GOLGA3Q08378 1498 aa22.25■■□□□ 1.15
CACNB3-221ENST00000552022 LMTK3Q96Q04 1460 aa22.25■■□□□ 1.15
CACNB3-221ENST00000552022 RAPGEF3O95398 923 aa22.24■■□□□ 1.15
CACNB3-221ENST00000552022 MADDQ8WXG6 1647 aa22.23■■□□□ 1.15
CACNB3-221ENST00000552022 PHLDB1Q86UU1 1377 aa22.21■■□□□ 1.15
CACNB3-221ENST00000552022 ABCA9Q8IUA7 1624 aa22.2■■□□□ 1.14
CACNB3-221ENST00000552022 ARID3CA6NKF2 412 aa22.19■■□□□ 1.14
CACNB3-221ENST00000552022 ATP10BO94823 1461 aa22.17■■□□□ 1.14
CACNB3-221ENST00000552022 ARID4BQ4LE39 1312 aaPredicted RBP22.16■■□□□ 1.14
CACNB3-221ENST00000552022 FRMPD1Q5SYB0 1578 aa22.15■■□□□ 1.14
CACNB3-221ENST00000552022 HSPA2P54652 639 aa22.14■■□□□ 1.13
CACNB3-221ENST00000552022 RIMS1Q86UR5 1692 aaKnown RBP22.14■■□□□ 1.13
CACNB3-221ENST00000552022 NEO1Q92859 1461 aa22.13■■□□□ 1.13
CACNB3-221ENST00000552022 CERKQ8TCT0 537 aa22.1■■□□□ 1.13
CACNB3-221ENST00000552022 ILDR2Q71H61 639 aa22.06■■□□□ 1.12
CACNB3-221ENST00000552022 P3H3Q8IVL6 736 aa22.06■■□□□ 1.12
CACNB3-221ENST00000552022 ARHGEF40Q8TER5 1519 aa22.03■■□□□ 1.12
CACNB3-221ENST00000552022 FAM9AQ8IZU1 332 aaPredicted RBP22.03■■□□□ 1.12
CACNB3-221ENST00000552022 PLPPR3Q6T4P5 718 aa22.02■■□□□ 1.12
CACNB3-221ENST00000552022 RICTORQ6R327 1708 aa22.02■■□□□ 1.12
CACNB3-221ENST00000552022 PRXQ9BXM0 1461 aa22.02■■□□□ 1.12
CACNB3-221ENST00000552022 SOCS7O14512 581 aa22■■□□□ 1.11
CACNB3-221ENST00000552022 SIGLEC1Q9BZZ2 1709 aa22■■□□□ 1.11
CACNB3-221ENST00000552022 RAPGEF6Q8TEU7 1601 aa21.98■■□□□ 1.11
CACNB3-221ENST00000552022 DISP3Q9P2K9 1392 aa21.98■■□□□ 1.11
CACNB3-221ENST00000552022 DENND4BO75064 1496 aaPredicted RBP21.97■■□□□ 1.11
CACNB3-221ENST00000552022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.96■■□□□ 1.11
CACNB3-221ENST00000552022 HNRNPUL2Q1KMD3 747 aaKnown RBP21.96■■□□□ 1.11
CACNB3-221ENST00000552022 FHOD3Q2V2M9 1422 aa21.94■■□□□ 1.1
CACNB3-221ENST00000552022 FANCAO15360 1455 aa21.93■■□□□ 1.1
CACNB3-221ENST00000552022 POGZQ7Z3K3 1410 aa21.93■■□□□ 1.1
CACNB3-221ENST00000552022 AKNAQ7Z591 1439 aa21.93■■□□□ 1.1
CACNB3-221ENST00000552022 SAMD9Q5K651 1589 aa21.92■■□□□ 1.1
CACNB3-221ENST00000552022 FER1L4A9Z1Z3 1794 aa21.91■■□□□ 1.1
CACNB3-221ENST00000552022 NUP153P49790 1475 aaKnown RBP21.9■■□□□ 1.1
CACNB3-221ENST00000552022 YEATS2Q9ULM3 1422 aa21.89■■□□□ 1.1
CACNB3-221ENST00000552022 ZMYM4Q5VZL5 1548 aa21.89■■□□□ 1.09
CACNB3-221ENST00000552022 TTC37Q6PGP7 1564 aa21.88■■□□□ 1.09
CACNB3-221ENST00000552022 MLECQ14165 292 aa21.88■■□□□ 1.09
CACNB3-221ENST00000552022 ZFYVE16Q7Z3T8 1539 aa21.87■■□□□ 1.09
CACNB3-221ENST00000552022 CFAP74Q9C0B2 1584 aa21.86■■□□□ 1.09
CACNB3-221ENST00000552022 STRCQ7RTU9 1775 aa21.85■■□□□ 1.09
CACNB3-221ENST00000552022 EFCAB5A4FU69 1503 aa21.85■■□□□ 1.09
CACNB3-221ENST00000552022 PREX1Q8TCU6 1659 aa21.84■■□□□ 1.09
CACNB3-221ENST00000552022 PLEKHD1A6NEE1 506 aa21.83■■□□□ 1.09
CACNB3-221ENST00000552022 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms