RNA–Protein interactions for RNA: ENST00000551442.5

PPFIA2-223, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 4

Gene PPFIA2, Length 825 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-223ENST00000551442 ERICH3Q5RHP9 1530 aa23.08■■□□□ 1.28
PPFIA2-223ENST00000551442 TOP2BQ02880 1626 aa23.06■■□□□ 1.28
PPFIA2-223ENST00000551442 BIVM-ERCC5R4GMW8 1640 aa23.04■■□□□ 1.28
PPFIA2-223ENST00000551442 DIP2BQ9P265 1576 aa23.02■■□□□ 1.28
PPFIA2-223ENST00000551442 ILDR1Q86SU0 546 aaPredicted RBP23.02■■□□□ 1.28
PPFIA2-223ENST00000551442 NPM1P06748 294 aaKnown RBP eCLIP23.01■■□□□ 1.27
PPFIA2-223ENST00000551442 MAPKBP1O60336 1514 aa23.01■■□□□ 1.27
PPFIA2-223ENST00000551442 ADCY10Q96PN6 1610 aa22.99■■□□□ 1.27
PPFIA2-223ENST00000551442 SUPT5HO00267 1087 aaKnown RBP22.97■■□□□ 1.27
PPFIA2-223ENST00000551442 RUSC2Q8N2Y8 1516 aa22.97■■□□□ 1.27
PPFIA2-223ENST00000551442 KDM6BO15054 1643 aa22.95■■□□□ 1.26
PPFIA2-223ENST00000551442 SENP3Q9H4L4 574 aaPredicted RBP22.94■■□□□ 1.26
PPFIA2-223ENST00000551442 TSPOAP1O95153 1857 aa22.9■■□□□ 1.26
PPFIA2-223ENST00000551442 KIAA0586Q9BVV6 1533 aa22.81■■□□□ 1.24
PPFIA2-223ENST00000551442 TTBK1Q5TCY1 1321 aaPredicted RBP22.77■■□□□ 1.24
PPFIA2-223ENST00000551442 IGF1RP08069 1367 aa22.76■■□□□ 1.23
PPFIA2-223ENST00000551442 PTPRGP23470 1445 aa22.73■■□□□ 1.23
PPFIA2-223ENST00000551442 ADGRL1O94910 1474 aa22.71■■□□□ 1.23
PPFIA2-223ENST00000551442 PPRC1Q5VV67 1664 aaKnown RBP22.71■■□□□ 1.23
PPFIA2-223ENST00000551442 COL17A1Q9UMD9 1497 aaPredicted RBP22.7■■□□□ 1.22
PPFIA2-223ENST00000551442 ASXL2Q76L83 1435 aa22.68■■□□□ 1.22
PPFIA2-223ENST00000551442 ABCC2Q92887 1545 aa22.66■■□□□ 1.22
PPFIA2-223ENST00000551442 PHF23Q9BUL5 403 aaPredicted RBP22.65■■□□□ 1.22
PPFIA2-223ENST00000551442 GLI2P10070 1586 aa22.63■■□□□ 1.21
PPFIA2-223ENST00000551442 TNIKQ9UKE5 1360 aa22.62■■□□□ 1.21
PPFIA2-223ENST00000551442 PLB1Q6P1J6 1458 aa22.6■■□□□ 1.21
PPFIA2-223ENST00000551442 KIF27Q86VH2 1401 aa22.59■■□□□ 1.21
PPFIA2-223ENST00000551442 HECW2Q9P2P5 1572 aa22.59■■□□□ 1.21
PPFIA2-223ENST00000551442 CUL7Q14999 1698 aa22.58■■□□□ 1.21
PPFIA2-223ENST00000551442 CARMIL1Q5VZK9 1371 aa22.55■■□□□ 1.2
PPFIA2-223ENST00000551442 CARMIL2Q6F5E8 1435 aa22.55■■□□□ 1.2
PPFIA2-223ENST00000551442 UHRF1BP1LA0JNW5 1464 aa22.54■■□□□ 1.2
PPFIA2-223ENST00000551442 EPRSP07814 1512 aaKnown RBP22.53■■□□□ 1.2
PPFIA2-223ENST00000551442 UACAQ9BZF9 1416 aa22.53■■□□□ 1.2
PPFIA2-223ENST00000551442 MAP3K4Q9Y6R4 1608 aa22.49■■□□□ 1.19
PPFIA2-223ENST00000551442 DISP1Q96F81 1524 aa22.49■■□□□ 1.19
PPFIA2-223ENST00000551442 KDM5BQ9UGL1 1544 aa22.47■■□□□ 1.19
PPFIA2-223ENST00000551442 IQGAP2Q13576 1575 aa22.46■■□□□ 1.19
PPFIA2-223ENST00000551442 TEX14Q8IWB6 1497 aa22.41■■□□□ 1.18
PPFIA2-223ENST00000551442 ZCCHC11Q5TAX3 1644 aaKnown RBP22.41■■□□□ 1.18
PPFIA2-223ENST00000551442 UGGT2Q9NYU1 1516 aa22.33■■□□□ 1.17
PPFIA2-223ENST00000551442 WDR7Q9Y4E6 1490 aa22.32■■□□□ 1.16
PPFIA2-223ENST00000551442 KIAA0556O60303 1618 aa22.29■■□□□ 1.16
PPFIA2-223ENST00000551442 FBXO41Q8TF61 875 aa22.28■■□□□ 1.16
PPFIA2-223ENST00000551442 KCNH8Q96L42 1107 aa22.28■■□□□ 1.16
PPFIA2-223ENST00000551442 CD109Q6YHK3 1445 aa22.28■■□□□ 1.16
PPFIA2-223ENST00000551442 MAGI3Q5TCQ9 1506 aa22.26■■□□□ 1.15
PPFIA2-223ENST00000551442 RAPGEF2Q9Y4G8 1499 aa22.24■■□□□ 1.15
PPFIA2-223ENST00000551442 KIF21BO75037 1637 aa22.22■■□□□ 1.15
PPFIA2-223ENST00000551442 CFAP43Q8NDM7 1665 aa22.18■■□□□ 1.14
PPFIA2-223ENST00000551442 ABCA8O94911 1581 aa22.15■■□□□ 1.14
PPFIA2-223ENST00000551442 PTPRMP28827 1452 aa22.11■■□□□ 1.13
PPFIA2-223ENST00000551442 ARAP3Q8WWN8 1544 aa22.11■■□□□ 1.13
PPFIA2-223ENST00000551442 ARID3CA6NKF2 412 aa22.1■■□□□ 1.13
PPFIA2-223ENST00000551442 ADAMTSL3P82987 1691 aa22.07■■□□□ 1.12
PPFIA2-223ENST00000551442 RAPGEF3O95398 923 aa22.07■■□□□ 1.12
PPFIA2-223ENST00000551442 GOLGA3Q08378 1498 aa22.03■■□□□ 1.12
PPFIA2-223ENST00000551442 CTTNBP2Q8WZ74 1663 aa22.02■■□□□ 1.12
PPFIA2-223ENST00000551442 ATP10BO94823 1461 aa22.02■■□□□ 1.12
PPFIA2-223ENST00000551442 LMTK3Q96Q04 1460 aa21.98■■□□□ 1.11
PPFIA2-223ENST00000551442 P3H3Q8IVL6 736 aa21.98■■□□□ 1.11
PPFIA2-223ENST00000551442 PCF11O94913 1555 aaKnown RBP21.96■■□□□ 1.11
PPFIA2-223ENST00000551442 MADDQ8WXG6 1647 aa21.95■■□□□ 1.1
PPFIA2-223ENST00000551442 ABCA9Q8IUA7 1624 aa21.95■■□□□ 1.1
PPFIA2-223ENST00000551442 BCORL1Q5H9F3 1711 aa21.94■■□□□ 1.1
PPFIA2-223ENST00000551442 ARID4BQ4LE39 1312 aaPredicted RBP21.94■■□□□ 1.1
PPFIA2-223ENST00000551442 HSPA2P54652 639 aa21.93■■□□□ 1.1
PPFIA2-223ENST00000551442 FRMPD1Q5SYB0 1578 aa21.93■■□□□ 1.1
PPFIA2-223ENST00000551442 PHLDB1Q86UU1 1377 aa21.92■■□□□ 1.1
PPFIA2-223ENST00000551442 PRXQ9BXM0 1461 aa21.9■■□□□ 1.1
PPFIA2-223ENST00000551442 NEO1Q92859 1461 aa21.88■■□□□ 1.09
PPFIA2-223ENST00000551442 PLPPR3Q6T4P5 718 aa21.86■■□□□ 1.09
PPFIA2-223ENST00000551442 RIMS1Q86UR5 1692 aaKnown RBP21.84■■□□□ 1.09
PPFIA2-223ENST00000551442 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.81■■□□□ 1.08
PPFIA2-223ENST00000551442 HNRNPUL2Q1KMD3 747 aaKnown RBP21.81■■□□□ 1.08
PPFIA2-223ENST00000551442 CERKQ8TCT0 537 aa21.81■■□□□ 1.08
PPFIA2-223ENST00000551442 SIGLEC1Q9BZZ2 1709 aa21.77■■□□□ 1.08
PPFIA2-223ENST00000551442 ARHGEF40Q8TER5 1519 aa21.77■■□□□ 1.08
PPFIA2-223ENST00000551442 ILDR2Q71H61 639 aa21.77■■□□□ 1.08
PPFIA2-223ENST00000551442 FAM9AQ8IZU1 332 aaPredicted RBP21.76■■□□□ 1.07
PPFIA2-223ENST00000551442 RAPGEF6Q8TEU7 1601 aa21.76■■□□□ 1.07
PPFIA2-223ENST00000551442 DENND4BO75064 1496 aaPredicted RBP21.75■■□□□ 1.07
PPFIA2-223ENST00000551442 NUP153P49790 1475 aaKnown RBP21.75■■□□□ 1.07
PPFIA2-223ENST00000551442 RICTORQ6R327 1708 aa21.75■■□□□ 1.07
PPFIA2-223ENST00000551442 SAMD9Q5K651 1589 aa21.74■■□□□ 1.07
PPFIA2-223ENST00000551442 AKNAQ7Z591 1439 aa21.73■■□□□ 1.07
PPFIA2-223ENST00000551442 FHOD3Q2V2M9 1422 aa21.72■■□□□ 1.07
PPFIA2-223ENST00000551442 YEATS2Q9ULM3 1422 aa21.72■■□□□ 1.07
PPFIA2-223ENST00000551442 MLECQ14165 292 aa21.71■■□□□ 1.07
PPFIA2-223ENST00000551442 FANCAO15360 1455 aa21.68■■□□□ 1.06
PPFIA2-223ENST00000551442 RANGAP1P46060 587 aaPredicted RBP21.67■■□□□ 1.06
PPFIA2-223ENST00000551442 PLEKHD1A6NEE1 506 aa21.66■■□□□ 1.06
PPFIA2-223ENST00000551442 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.65■■□□□ 1.06
PPFIA2-223ENST00000551442 POGZQ7Z3K3 1410 aa21.64■■□□□ 1.06
PPFIA2-223ENST00000551442 DISP3Q9P2K9 1392 aa21.64■■□□□ 1.06
PPFIA2-223ENST00000551442 ZMYM4Q5VZL5 1548 aa21.64■■□□□ 1.05
PPFIA2-223ENST00000551442 ZFYVE16Q7Z3T8 1539 aa21.63■■□□□ 1.05
PPFIA2-223ENST00000551442 CEBPAP49715 358 aaPredicted RBP21.62■■□□□ 1.05
PPFIA2-223ENST00000551442 SOCS7O14512 581 aa21.61■■□□□ 1.05
PPFIA2-223ENST00000551442 TTC37Q6PGP7 1564 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms