RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 KIAA0586Q9BVV6 1533 aa32.23■■■□□ 2.75
DDX54-208ENST00000551344 PRG4Q92954 1404 aaPredicted RBP32.23■■■□□ 2.75
DDX54-208ENST00000551344 RUSC2Q8N2Y8 1516 aa32.21■■■□□ 2.75
DDX54-208ENST00000551344 RAPGEF2Q9Y4G8 1499 aa32.1■■■□□ 2.73
DDX54-208ENST00000551344 TRHP20396 242 aaPredicted RBP32.07■■■□□ 2.72
DDX54-208ENST00000551344 IQGAP2Q13576 1575 aa31.93■■■□□ 2.7
DDX54-208ENST00000551344 PRXQ9BXM0 1461 aa31.92■■■□□ 2.7
DDX54-208ENST00000551344 CARMIL2Q6F5E8 1435 aa31.92■■■□□ 2.7
DDX54-208ENST00000551344 CSRNP3Q8WYN3 585 aa31.91■■■□□ 2.7
DDX54-208ENST00000551344 PTPRGP23470 1445 aa31.84■■■□□ 2.69
DDX54-208ENST00000551344 EEA1Q15075 1411 aa31.83■■■□□ 2.69
DDX54-208ENST00000551344 TNIKQ9UKE5 1360 aa31.82■■■□□ 2.69
DDX54-208ENST00000551344 NPM1P06748 294 aaKnown RBP eCLIP31.82■■■□□ 2.68
DDX54-208ENST00000551344 CHIC1Q5VXU3 224 aa31.82■■■□□ 2.68
DDX54-208ENST00000551344 UGGT2Q9NYU1 1516 aa31.79■■■□□ 2.68
DDX54-208ENST00000551344 DISP1Q96F81 1524 aa31.75■■■□□ 2.67
DDX54-208ENST00000551344 TTBK1Q5TCY1 1321 aaPredicted RBP31.74■■■□□ 2.67
DDX54-208ENST00000551344 ADCY10Q96PN6 1610 aa31.68■■■□□ 2.66
DDX54-208ENST00000551344 CTTNBP2Q8WZ74 1663 aa31.68■■■□□ 2.66
DDX54-208ENST00000551344 FAM9AQ8IZU1 332 aaPredicted RBP31.67■■■□□ 2.66
DDX54-208ENST00000551344 GOLGA3Q08378 1498 aa31.62■■■□□ 2.65
DDX54-208ENST00000551344 KIAA0556O60303 1618 aa31.61■■■□□ 2.65
DDX54-208ENST00000551344 MAPKBP1O60336 1514 aa31.59■■■□□ 2.65
DDX54-208ENST00000551344 UACAQ9BZF9 1416 aa31.59■■■□□ 2.65
DDX54-208ENST00000551344 UHRF1BP1LA0JNW5 1464 aa31.58■■■□□ 2.65
DDX54-208ENST00000551344 ABCC2Q92887 1545 aa31.54■■■□□ 2.64
DDX54-208ENST00000551344 ABCC10Q5T3U5 1492 aa31.52■■■□□ 2.64
DDX54-208ENST00000551344 FAM69CQ0P6D2 419 aa31.52■■■□□ 2.64
DDX54-208ENST00000551344 KIF13AQ9H1H9 1805 aa31.44■■■□□ 2.62
DDX54-208ENST00000551344 KIF21BO75037 1637 aa31.43■■■□□ 2.62
DDX54-208ENST00000551344 KDM5BQ9UGL1 1544 aa31.41■■■□□ 2.62
DDX54-208ENST00000551344 P3H3Q8IVL6 736 aa31.4■■■□□ 2.62
DDX54-208ENST00000551344 PLB1Q6P1J6 1458 aa31.39■■■□□ 2.62
DDX54-208ENST00000551344 ASXL2Q76L83 1435 aa31.38■■■□□ 2.61
DDX54-208ENST00000551344 DIP2BQ9P265 1576 aa31.38■■■□□ 2.61
DDX54-208ENST00000551344 ABCA8O94911 1581 aa31.32■■■□□ 2.6
DDX54-208ENST00000551344 SAMD9Q5K651 1589 aa31.31■■■□□ 2.6
DDX54-208ENST00000551344 UBTFP17480 764 aaKnown RBP31.31■■■□□ 2.6
DDX54-208ENST00000551344 RANGAP1P46060 587 aaPredicted RBP31.3■■■□□ 2.6
DDX54-208ENST00000551344 ZCCHC11Q5TAX3 1644 aaKnown RBP31.26■■■□□ 2.59
DDX54-208ENST00000551344 EHMT2Q96KQ7 1210 aa31.24■■■□□ 2.59
DDX54-208ENST00000551344 GLI2P10070 1586 aa31.21■■■□□ 2.59
DDX54-208ENST00000551344 EPRSP07814 1512 aaKnown RBP31.19■■■□□ 2.58
DDX54-208ENST00000551344 WDR7Q9Y4E6 1490 aa31.16■■■□□ 2.58
DDX54-208ENST00000551344 FHOD3Q2V2M9 1422 aa31.15■■■□□ 2.58
DDX54-208ENST00000551344 EFCAB5A4FU69 1503 aa31.15■■■□□ 2.58
DDX54-208ENST00000551344 ATP10BO94823 1461 aa31.12■■■□□ 2.57
DDX54-208ENST00000551344 TSPOAP1O95153 1857 aa31.1■■■□□ 2.57
DDX54-208ENST00000551344 ARID3CA6NKF2 412 aa31.09■■■□□ 2.57
DDX54-208ENST00000551344 KCNH8Q96L42 1107 aa31.08■■■□□ 2.57
DDX54-208ENST00000551344 RAPGEF6Q8TEU7 1601 aa31.07■■■□□ 2.56
DDX54-208ENST00000551344 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.02■■■□□ 2.56
DDX54-208ENST00000551344 HNRNPUL2Q1KMD3 747 aaKnown RBP31.02■■■□□ 2.56
DDX54-208ENST00000551344 MAP3K4Q9Y6R4 1608 aa31■■■□□ 2.55
DDX54-208ENST00000551344 NUP153P49790 1475 aaKnown RBP31■■■□□ 2.55
DDX54-208ENST00000551344 ARHGAP35Q9NRY4 1499 aa30.97■■■□□ 2.55
DDX54-208ENST00000551344 KDM6BO15054 1643 aa30.96■■■□□ 2.55
DDX54-208ENST00000551344 PPRC1Q5VV67 1664 aaKnown RBP30.96■■■□□ 2.55
DDX54-208ENST00000551344 TEX14Q8IWB6 1497 aa30.95■■■□□ 2.55
DDX54-208ENST00000551344 CD109Q6YHK3 1445 aa30.95■■■□□ 2.54
DDX54-208ENST00000551344 FMN1Q68DA7 1419 aa30.93■■■□□ 2.54
DDX54-208ENST00000551344 PLEKHD1A6NEE1 506 aa30.91■■■□□ 2.54
DDX54-208ENST00000551344 MAGI3Q5TCQ9 1506 aa30.88■■■□□ 2.53
DDX54-208ENST00000551344 CFAP43Q8NDM7 1665 aa30.88■■■□□ 2.53
DDX54-208ENST00000551344 ATP1B4Q9UN42 357 aaPredicted RBP30.82■■■□□ 2.52
DDX54-208ENST00000551344 COL17A1Q9UMD9 1497 aaPredicted RBP30.8■■■□□ 2.52
DDX54-208ENST00000551344 ABCA9Q8IUA7 1624 aa30.76■■■□□ 2.52
DDX54-208ENST00000551344 CDK11AQ9UQ88 783 aaPredicted RBP30.73■■■□□ 2.51
DDX54-208ENST00000551344 HECW1Q76N89 1606 aa30.73■■■□□ 2.51
DDX54-208ENST00000551344 CLIP1P30622 1438 aa30.72■■■□□ 2.51
DDX54-208ENST00000551344 PHLDB1Q86UU1 1377 aa30.71■■■□□ 2.51
DDX54-208ENST00000551344 CDK13Q14004 1512 aaKnown RBP30.71■■■□□ 2.51
DDX54-208ENST00000551344 AEBP2Q6ZN18 517 aaPredicted RBP30.68■■■□□ 2.5
DDX54-208ENST00000551344 CASKIN1Q8WXD9 1431 aa30.64■■■□□ 2.5
DDX54-208ENST00000551344 ARAP3Q8WWN8 1544 aa30.63■■■□□ 2.49
DDX54-208ENST00000551344 NEO1Q92859 1461 aa30.62■■■□□ 2.49
DDX54-208ENST00000551344 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.6■■■□□ 2.49
DDX54-208ENST00000551344 TROQ12816 1431 aaPredicted RBP30.54■■■□□ 2.48
DDX54-208ENST00000551344 CCDC18Q5T9S5 1454 aa30.53■■■□□ 2.48
DDX54-208ENST00000551344 LOC105371045A0A1W2PR82 267 aa30.52■■■□□ 2.48
DDX54-208ENST00000551344 PCF11O94913 1555 aaKnown RBP30.52■■■□□ 2.48
DDX54-208ENST00000551344 FYCO1Q9BQS8 1478 aa30.51■■■□□ 2.48
DDX54-208ENST00000551344 PLCH2O75038 1416 aa30.49■■■□□ 2.47
DDX54-208ENST00000551344 CEP162Q5TB80 1403 aa30.49■■■□□ 2.47
DDX54-208ENST00000551344 KDM4FA0A1W2PPD8 638 aa30.49■■■□□ 2.47
DDX54-208ENST00000551344 RAPGEF3O95398 923 aa30.49■■■□□ 2.47
DDX54-208ENST00000551344 FANCAO15360 1455 aa30.49■■■□□ 2.47
DDX54-208ENST00000551344 TTC37Q6PGP7 1564 aa30.49■■■□□ 2.47
DDX54-208ENST00000551344 AKNAQ7Z591 1439 aa30.47■■■□□ 2.47
DDX54-208ENST00000551344 LRRIQ1Q96JM4 1722 aa30.47■■■□□ 2.47
DDX54-208ENST00000551344 EFCAB2Q5VUJ9 269 aa30.42■■■□□ 2.46
DDX54-208ENST00000551344 CFAP74Q9C0B2 1584 aa30.41■■■□□ 2.46
DDX54-208ENST00000551344 KIF14Q15058 1648 aa30.41■■■□□ 2.46
DDX54-208ENST00000551344 DENND4BO75064 1496 aaPredicted RBP30.4■■■□□ 2.46
DDX54-208ENST00000551344 MYO5CQ9NQX4 1742 aa30.32■■■□□ 2.44
DDX54-208ENST00000551344 ADGRL1O94910 1474 aa30.31■■■□□ 2.44
DDX54-208ENST00000551344 SCAPERQ9BY12 1400 aa30.3■■■□□ 2.44
DDX54-208ENST00000551344 FRMPD1Q5SYB0 1578 aa30.3■■■□□ 2.44
DDX54-208ENST00000551344 ARHGAP5Q13017 1502 aa30.26■■■□□ 2.43
DDX54-208ENST00000551344 RICTORQ6R327 1708 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms