RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 JPH4Q96JJ6 628 aa20.27■□□□□ 0.84
ERBB3-216ENST00000550869 KIF27Q86VH2 1401 aa20.25■□□□□ 0.83
ERBB3-216ENST00000550869 KIF13AQ9H1H9 1805 aa20.21■□□□□ 0.83
ERBB3-216ENST00000550869 KIAA0586Q9BVV6 1533 aa20.2■□□□□ 0.82
ERBB3-216ENST00000550869 IGF1RP08069 1367 aa20.2■□□□□ 0.82
ERBB3-216ENST00000550869 MAPKBP1O60336 1514 aa20.15■□□□□ 0.82
ERBB3-216ENST00000550869 ADCY10Q96PN6 1610 aa20.12■□□□□ 0.81
ERBB3-216ENST00000550869 NPM1P06748 294 aaKnown RBP eCLIP20.11■□□□□ 0.81
ERBB3-216ENST00000550869 ABCC10Q5T3U5 1492 aa20.1■□□□□ 0.81
ERBB3-216ENST00000550869 AEBP2Q6ZN18 517 aaPredicted RBP20.09■□□□□ 0.81
ERBB3-216ENST00000550869 EEA1Q15075 1411 aa20.07■□□□□ 0.8
ERBB3-216ENST00000550869 CARMIL1Q5VZK9 1371 aa20.07■□□□□ 0.8
ERBB3-216ENST00000550869 DIP2BQ9P265 1576 aa20.06■□□□□ 0.8
ERBB3-216ENST00000550869 FAM69CQ0P6D2 419 aa20.02■□□□□ 0.8
ERBB3-216ENST00000550869 IQGAP2Q13576 1575 aa20.02■□□□□ 0.8
ERBB3-216ENST00000550869 CARMIL2Q6F5E8 1435 aa20.02■□□□□ 0.79
ERBB3-216ENST00000550869 PTPRGP23470 1445 aa19.99■□□□□ 0.79
ERBB3-216ENST00000550869 TNIKQ9UKE5 1360 aa19.96■□□□□ 0.79
ERBB3-216ENST00000550869 CSRNP3Q8WYN3 585 aa19.96■□□□□ 0.79
ERBB3-216ENST00000550869 ABCC2Q92887 1545 aa19.93■□□□□ 0.78
ERBB3-216ENST00000550869 FAM9AQ8IZU1 332 aaPredicted RBP19.92■□□□□ 0.78
ERBB3-216ENST00000550869 UHRF1BP1LA0JNW5 1464 aa19.91■□□□□ 0.78
ERBB3-216ENST00000550869 RAPGEF2Q9Y4G8 1499 aa19.91■□□□□ 0.78
ERBB3-216ENST00000550869 KDM6BO15054 1643 aa19.9■□□□□ 0.78
ERBB3-216ENST00000550869 UGGT2Q9NYU1 1516 aa19.89■□□□□ 0.77
ERBB3-216ENST00000550869 TSPOAP1O95153 1857 aa19.88■□□□□ 0.77
ERBB3-216ENST00000550869 DISP1Q96F81 1524 aa19.88■□□□□ 0.77
ERBB3-216ENST00000550869 PLB1Q6P1J6 1458 aa19.87■□□□□ 0.77
ERBB3-216ENST00000550869 PRXQ9BXM0 1461 aa19.86■□□□□ 0.77
ERBB3-216ENST00000550869 GLI2P10070 1586 aa19.86■□□□□ 0.77
ERBB3-216ENST00000550869 UACAQ9BZF9 1416 aa19.85■□□□□ 0.77
ERBB3-216ENST00000550869 ASXL2Q76L83 1435 aa19.84■□□□□ 0.77
ERBB3-216ENST00000550869 KIAA0556O60303 1618 aa19.82■□□□□ 0.76
ERBB3-216ENST00000550869 CTTNBP2Q8WZ74 1663 aa19.81■□□□□ 0.76
ERBB3-216ENST00000550869 TTBK1Q5TCY1 1321 aaPredicted RBP19.81■□□□□ 0.76
ERBB3-216ENST00000550869 KIF21BO75037 1637 aa19.81■□□□□ 0.76
ERBB3-216ENST00000550869 KDM5BQ9UGL1 1544 aa19.81■□□□□ 0.76
ERBB3-216ENST00000550869 PPRC1Q5VV67 1664 aaKnown RBP19.77■□□□□ 0.76
ERBB3-216ENST00000550869 ZCCHC11Q5TAX3 1644 aaKnown RBP19.76■□□□□ 0.75
ERBB3-216ENST00000550869 GOLGA3Q08378 1498 aa19.73■□□□□ 0.75
ERBB3-216ENST00000550869 MAP3K4Q9Y6R4 1608 aa19.73■□□□□ 0.75
ERBB3-216ENST00000550869 EPRSP07814 1512 aaKnown RBP19.73■□□□□ 0.75
ERBB3-216ENST00000550869 LOC105371045A0A1W2PR82 267 aa19.72■□□□□ 0.75
ERBB3-216ENST00000550869 TEX14Q8IWB6 1497 aa19.69■□□□□ 0.74
ERBB3-216ENST00000550869 WDR7Q9Y4E6 1490 aa19.67■□□□□ 0.74
ERBB3-216ENST00000550869 ABCA8O94911 1581 aa19.64■□□□□ 0.73
ERBB3-216ENST00000550869 KDM4FA0A1W2PPD8 638 aa19.63■□□□□ 0.73
ERBB3-216ENST00000550869 CFAP43Q8NDM7 1665 aa19.6■□□□□ 0.73
ERBB3-216ENST00000550869 COL17A1Q9UMD9 1497 aaPredicted RBP19.57■□□□□ 0.72
ERBB3-216ENST00000550869 UBTFP17480 764 aaKnown RBP19.57■□□□□ 0.72
ERBB3-216ENST00000550869 MAGI3Q5TCQ9 1506 aa19.56■□□□□ 0.72
ERBB3-216ENST00000550869 EHMT2Q96KQ7 1210 aa19.55■□□□□ 0.72
ERBB3-216ENST00000550869 ADGRL1O94910 1474 aa19.53■□□□□ 0.72
ERBB3-216ENST00000550869 CD109Q6YHK3 1445 aa19.52■□□□□ 0.72
ERBB3-216ENST00000550869 SAMD9Q5K651 1589 aa19.51■□□□□ 0.71
ERBB3-216ENST00000550869 KCNH8Q96L42 1107 aa19.45■□□□□ 0.7
ERBB3-216ENST00000550869 ATP10BO94823 1461 aa19.43■□□□□ 0.7
ERBB3-216ENST00000550869 RAPGEF6Q8TEU7 1601 aa19.43■□□□□ 0.7
ERBB3-216ENST00000550869 ABCA9Q8IUA7 1624 aa19.42■□□□□ 0.7
ERBB3-216ENST00000550869 CEP162Q5TB80 1403 aa19.42■□□□□ 0.7
ERBB3-216ENST00000550869 ARAP3Q8WWN8 1544 aa19.41■□□□□ 0.7
ERBB3-216ENST00000550869 PHLDB1Q86UU1 1377 aa19.4■□□□□ 0.7
ERBB3-216ENST00000550869 P3H3Q8IVL6 736 aa19.38■□□□□ 0.69
ERBB3-216ENST00000550869 CLIP1P30622 1438 aa19.36■□□□□ 0.69
ERBB3-216ENST00000550869 ARHGAP35Q9NRY4 1499 aa19.34■□□□□ 0.69
ERBB3-216ENST00000550869 NUP153P49790 1475 aaKnown RBP19.33■□□□□ 0.68
ERBB3-216ENST00000550869 NEO1Q92859 1461 aa19.33■□□□□ 0.68
ERBB3-216ENST00000550869 EFCAB5A4FU69 1503 aa19.32■□□□□ 0.68
ERBB3-216ENST00000550869 ARID3CA6NKF2 412 aa19.31■□□□□ 0.68
ERBB3-216ENST00000550869 HECW2Q9P2P5 1572 aa19.28■□□□□ 0.68
ERBB3-216ENST00000550869 FHOD3Q2V2M9 1422 aa19.27■□□□□ 0.68
ERBB3-216ENST00000550869 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.26■□□□□ 0.67
ERBB3-216ENST00000550869 HNRNPUL2Q1KMD3 747 aaKnown RBP19.26■□□□□ 0.67
ERBB3-216ENST00000550869 RANGAP1P46060 587 aaPredicted RBP19.25■□□□□ 0.67
ERBB3-216ENST00000550869 CFAP74Q9C0B2 1584 aa19.23■□□□□ 0.67
ERBB3-216ENST00000550869 PLEKHD1A6NEE1 506 aa19.21■□□□□ 0.67
ERBB3-216ENST00000550869 FRMPD1Q5SYB0 1578 aa19.21■□□□□ 0.67
ERBB3-216ENST00000550869 ADAMTSL3P82987 1691 aa19.2■□□□□ 0.66
ERBB3-216ENST00000550869 RAPGEF3O95398 923 aa19.18■□□□□ 0.66
ERBB3-216ENST00000550869 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.17■□□□□ 0.66
ERBB3-216ENST00000550869 RICTORQ6R327 1708 aa19.17■□□□□ 0.66
ERBB3-216ENST00000550869 VPS8Q8N3P4 1428 aa19.17■□□□□ 0.66
ERBB3-216ENST00000550869 ARHGEF40Q8TER5 1519 aa19.15■□□□□ 0.66
ERBB3-216ENST00000550869 BCORL1Q5H9F3 1711 aa19.15■□□□□ 0.66
ERBB3-216ENST00000550869 FANCAO15360 1455 aa19.15■□□□□ 0.66
ERBB3-216ENST00000550869 DENND4BO75064 1496 aaPredicted RBP19.15■□□□□ 0.66
ERBB3-216ENST00000550869 TTC37Q6PGP7 1564 aa19.14■□□□□ 0.65
ERBB3-216ENST00000550869 FMN1Q68DA7 1419 aa19.13■□□□□ 0.65
ERBB3-216ENST00000550869 AKNAQ7Z591 1439 aa19.13■□□□□ 0.65
ERBB3-216ENST00000550869 HECW1Q76N89 1606 aa19.12■□□□□ 0.65
ERBB3-216ENST00000550869 PTPRMP28827 1452 aa19.12■□□□□ 0.65
ERBB3-216ENST00000550869 ZMYM4Q5VZL5 1548 aa19.11■□□□□ 0.65
ERBB3-216ENST00000550869 CDK13Q14004 1512 aaKnown RBP19.1■□□□□ 0.65
ERBB3-216ENST00000550869 MADDQ8WXG6 1647 aa19.08■□□□□ 0.65
ERBB3-216ENST00000550869 ILDR1Q86SU0 546 aaPredicted RBP19.08■□□□□ 0.64
ERBB3-216ENST00000550869 MAGI2Q86UL8 1455 aa19.08■□□□□ 0.64
ERBB3-216ENST00000550869 CASKIN1Q8WXD9 1431 aa19.07■□□□□ 0.64
ERBB3-216ENST00000550869 ARID4BQ4LE39 1312 aaPredicted RBP19.06■□□□□ 0.64
ERBB3-216ENST00000550869 PLCH2O75038 1416 aa19.05■□□□□ 0.64
ERBB3-216ENST00000550869 MYO5CQ9NQX4 1742 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms