RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 CEP170Q5SW79 1584 aa12.29□□□□□ -0.44
CBX5-204ENST00000550411 ERCC6L2Q5T890 1561 aa12.27□□□□□ -0.44
CBX5-204ENST00000550411 POTEDQ86YR6 584 aa12.27□□□□□ -0.45
CBX5-204ENST00000550411 GRIN2AQ12879 1464 aa12.27□□□□□ -0.45
CBX5-204ENST00000550411 WRNQ14191 1432 aaPredicted RBP eCLIP12.22□□□□□ -0.45
CBX5-204ENST00000550411 ERICH3Q5RHP9 1530 aa12.21□□□□□ -0.45
CBX5-204ENST00000550411 NUP160Q12769 1436 aa12.2□□□□□ -0.46
CBX5-204ENST00000550411 TSPOAP1O95153 1857 aa12.19□□□□□ -0.46
CBX5-204ENST00000550411 FHAD1B1AJZ9 1412 aa12.18□□□□□ -0.46
CBX5-204ENST00000550411 RUSC2Q8N2Y8 1516 aa12.16□□□□□ -0.46
CBX5-204ENST00000550411 CUL7Q14999 1698 aa12.13□□□□□ -0.47
CBX5-204ENST00000550411 PPP4R3CPQ6ZMV5 832 aa12.11□□□□□ -0.47
CBX5-204ENST00000550411 PIAS4Q8N2W9 510 aaPredicted RBP12.1□□□□□ -0.47
CBX5-204ENST00000550411 CSRNP3Q8WYN3 585 aa12.09□□□□□ -0.47
CBX5-204ENST00000550411 SLC4A1APQ9BWU0 796 aaKnown RBP12.09□□□□□ -0.47
CBX5-204ENST00000550411 PRG4Q92954 1404 aaPredicted RBP12.08□□□□□ -0.48
CBX5-204ENST00000550411 ADCY10Q96PN6 1610 aa12.08□□□□□ -0.48
CBX5-204ENST00000550411 DIP2BQ9P265 1576 aa12.05□□□□□ -0.48
CBX5-204ENST00000550411 MAPKBP1O60336 1514 aa12.03□□□□□ -0.48
CBX5-204ENST00000550411 JPH4Q96JJ6 628 aa12.03□□□□□ -0.48
CBX5-204ENST00000550411 KDM6BO15054 1643 aa12□□□□□ -0.49
CBX5-204ENST00000550411 ABCC10Q5T3U5 1492 aa11.99□□□□□ -0.49
CBX5-204ENST00000550411 CTTNBP2Q8WZ74 1663 aa11.98□□□□□ -0.49
CBX5-204ENST00000550411 KIAA0586Q9BVV6 1533 aa11.98□□□□□ -0.49
CBX5-204ENST00000550411 PPRC1Q5VV67 1664 aaKnown RBP11.97□□□□□ -0.49
CBX5-204ENST00000550411 KIF27Q86VH2 1401 aa11.96□□□□□ -0.49
CBX5-204ENST00000550411 NPM1P06748 294 aaKnown RBP eCLIP11.96□□□□□ -0.49
CBX5-204ENST00000550411 IQGAP2Q13576 1575 aa11.94□□□□□ -0.5
CBX5-204ENST00000550411 MSH5O43196 834 aa11.94□□□□□ -0.5
CBX5-204ENST00000550411 FAM69CQ0P6D2 419 aa11.93□□□□□ -0.5
CBX5-204ENST00000550411 IGF1RP08069 1367 aa11.92□□□□□ -0.5
CBX5-204ENST00000550411 NCBP3Q53F19 620 aaKnown RBP11.9□□□□□ -0.5
CBX5-204ENST00000550411 ZCCHC11Q5TAX3 1644 aaKnown RBP11.89□□□□□ -0.51
CBX5-204ENST00000550411 GLI2P10070 1586 aa11.88□□□□□ -0.51
CBX5-204ENST00000550411 MAP3K4Q9Y6R4 1608 aa11.87□□□□□ -0.51
CBX5-204ENST00000550411 CARMIL1Q5VZK9 1371 aa11.87□□□□□ -0.51
CBX5-204ENST00000550411 CARMIL2Q6F5E8 1435 aa11.86□□□□□ -0.51
CBX5-204ENST00000550411 ABCC2Q92887 1545 aa11.86□□□□□ -0.51
CBX5-204ENST00000550411 PTPRGP23470 1445 aa11.86□□□□□ -0.51
CBX5-204ENST00000550411 NPM3O75607 178 aaKnown RBP11.85□□□□□ -0.51
CBX5-204ENST00000550411 TNIKQ9UKE5 1360 aa11.84□□□□□ -0.51
CBX5-204ENST00000550411 KIAA0556O60303 1618 aa11.84□□□□□ -0.51
CBX5-204ENST00000550411 TTBK1Q5TCY1 1321 aaPredicted RBP11.83□□□□□ -0.52
CBX5-204ENST00000550411 UHRF1BP1LA0JNW5 1464 aa11.83□□□□□ -0.52
CBX5-204ENST00000550411 DISP1Q96F81 1524 aa11.82□□□□□ -0.52
CBX5-204ENST00000550411 CFAP43Q8NDM7 1665 aa11.82□□□□□ -0.52
CBX5-204ENST00000550411 PLB1Q6P1J6 1458 aa11.82□□□□□ -0.52
CBX5-204ENST00000550411 UGGT2Q9NYU1 1516 aa11.81□□□□□ -0.52
CBX5-204ENST00000550411 ASXL2Q76L83 1435 aa11.8□□□□□ -0.52
CBX5-204ENST00000550411 RAPGEF2Q9Y4G8 1499 aa11.79□□□□□ -0.52
CBX5-204ENST00000550411 UACAQ9BZF9 1416 aa11.78□□□□□ -0.52
CBX5-204ENST00000550411 KDM5BQ9UGL1 1544 aa11.78□□□□□ -0.52
CBX5-204ENST00000550411 PRXQ9BXM0 1461 aa11.76□□□□□ -0.53
CBX5-204ENST00000550411 EPRSP07814 1512 aaKnown RBP11.76□□□□□ -0.53
CBX5-204ENST00000550411 KDM4FA0A1W2PPD8 638 aa11.75□□□□□ -0.53
CBX5-204ENST00000550411 TEX14Q8IWB6 1497 aa11.73□□□□□ -0.53
CBX5-204ENST00000550411 ABCA8O94911 1581 aa11.71□□□□□ -0.53
CBX5-204ENST00000550411 ADGRL1O94910 1474 aa11.7□□□□□ -0.54
CBX5-204ENST00000550411 GOLGA3Q08378 1498 aa11.7□□□□□ -0.54
CBX5-204ENST00000550411 KIF21BO75037 1637 aa11.69□□□□□ -0.54
CBX5-204ENST00000550411 ZBTB22O15209 634 aa11.69□□□□□ -0.54
CBX5-204ENST00000550411 COL17A1Q9UMD9 1497 aaPredicted RBP11.69□□□□□ -0.54
CBX5-204ENST00000550411 WDR7Q9Y4E6 1490 aa11.69□□□□□ -0.54
CBX5-204ENST00000550411 HECW2Q9P2P5 1572 aa11.64□□□□□ -0.55
CBX5-204ENST00000550411 MAGI3Q5TCQ9 1506 aa11.64□□□□□ -0.55
CBX5-204ENST00000550411 ABCA9Q8IUA7 1624 aa11.64□□□□□ -0.55
CBX5-204ENST00000550411 SAMD9Q5K651 1589 aa11.63□□□□□ -0.55
CBX5-204ENST00000550411 EEA1Q15075 1411 aa11.63□□□□□ -0.55
CBX5-204ENST00000550411 RAPGEF6Q8TEU7 1601 aa11.63□□□□□ -0.55
CBX5-204ENST00000550411 CD109Q6YHK3 1445 aa11.6□□□□□ -0.55
CBX5-204ENST00000550411 CNKSR2Q8WXI2 1034 aa11.6□□□□□ -0.55
CBX5-204ENST00000550411 KCNH8Q96L42 1107 aa11.58□□□□□ -0.56
CBX5-204ENST00000550411 RICTORQ6R327 1708 aa11.57□□□□□ -0.56
CBX5-204ENST00000550411 ADAMTSL3P82987 1691 aa11.57□□□□□ -0.56
CBX5-204ENST00000550411 BCORL1Q5H9F3 1711 aa11.57□□□□□ -0.56
CBX5-204ENST00000550411 ARAP3Q8WWN8 1544 aa11.55□□□□□ -0.56
CBX5-204ENST00000550411 FAM9AQ8IZU1 332 aaPredicted RBP11.54□□□□□ -0.56
CBX5-204ENST00000550411 ATP10BO94823 1461 aa11.54□□□□□ -0.56
CBX5-204ENST00000550411 CFAP74Q9C0B2 1584 aa11.54□□□□□ -0.56
CBX5-204ENST00000550411 RIMS1Q86UR5 1692 aaKnown RBP11.52□□□□□ -0.56
CBX5-204ENST00000550411 FRMPD1Q5SYB0 1578 aa11.52□□□□□ -0.57
CBX5-204ENST00000550411 ILDR1Q86SU0 546 aaPredicted RBP11.51□□□□□ -0.57
CBX5-204ENST00000550411 P3H3Q8IVL6 736 aa11.51□□□□□ -0.57
CBX5-204ENST00000550411 MYO5CQ9NQX4 1742 aa11.51□□□□□ -0.57
CBX5-204ENST00000550411 MADDQ8WXG6 1647 aa11.5□□□□□ -0.57
CBX5-204ENST00000550411 FER1L4A9Z1Z3 1794 aa11.5□□□□□ -0.57
CBX5-204ENST00000550411 ARID3CA6NKF2 412 aa11.49□□□□□ -0.57
CBX5-204ENST00000550411 LRRIQ1Q96JM4 1722 aa11.49□□□□□ -0.57
CBX5-204ENST00000550411 NEO1Q92859 1461 aa11.48□□□□□ -0.57
CBX5-204ENST00000550411 SIGLEC1Q9BZZ2 1709 aa11.47□□□□□ -0.57
CBX5-204ENST00000550411 EFCAB5A4FU69 1503 aa11.47□□□□□ -0.57
CBX5-204ENST00000550411 PHLDB1Q86UU1 1377 aa11.47□□□□□ -0.57
CBX5-204ENST00000550411 NUP153P49790 1475 aaKnown RBP11.46□□□□□ -0.57
CBX5-204ENST00000550411 FHOD3Q2V2M9 1422 aa11.46□□□□□ -0.57
CBX5-204ENST00000550411 TTC37Q6PGP7 1564 aa11.45□□□□□ -0.58
CBX5-204ENST00000550411 SETD1BQ9UPS6 1966 aaKnown RBP11.45□□□□□ -0.58
CBX5-204ENST00000550411 SCAF1Q9H7N4 1312 aaKnown RBP11.45□□□□□ -0.58
CBX5-204ENST00000550411 ARHGEF40Q8TER5 1519 aa11.45□□□□□ -0.58
CBX5-204ENST00000550411 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.44□□□□□ -0.58
CBX5-204ENST00000550411 HNRNPUL2Q1KMD3 747 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 247.5 ms