RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 CNGB1Q14028 1251 aaPredicted RBP16.8■□□□□ 0.28
VDR-208ENST00000550325 CCER2I3L3R5 266 aa16.8■□□□□ 0.28
VDR-208ENST00000550325 RTN4Q9NQC3 1192 aaKnown RBP16.8■□□□□ 0.28
VDR-208ENST00000550325 RTL5Q5HYW3 569 aaPredicted RBP16.78■□□□□ 0.28
VDR-208ENST00000550325 MYT1LQ9UL68 1186 aa16.77■□□□□ 0.27
VDR-208ENST00000550325 PEG3Q9GZU2 1588 aa16.75■□□□□ 0.27
VDR-208ENST00000550325 NOP58Q9Y2X3 529 aaKnown RBP16.75■□□□□ 0.27
VDR-208ENST00000550325 CCDC136Q96JN2 1154 aa16.74■□□□□ 0.27
VDR-208ENST00000550325 WDR97A6NE52 1622 aa16.74■□□□□ 0.27
VDR-208ENST00000550325 FAM9BQ8IZU0 186 aa16.73■□□□□ 0.27
VDR-208ENST00000550325 PPP4R2Q9NY27 417 aa16.72■□□□□ 0.27
VDR-208ENST00000550325 PAK3O75914 559 aaPredicted RBP16.71■□□□□ 0.27
VDR-208ENST00000550325 SYNJ1O43426 1573 aa16.7■□□□□ 0.26
VDR-208ENST00000550325 BAZ1BQ9UIG0 1483 aaKnown RBP16.69■□□□□ 0.26
VDR-208ENST00000550325 SENP3-EIF4A1A0A087X0R7 540 aa16.69■□□□□ 0.26
VDR-208ENST00000550325 SALL2Q9Y467 1007 aaPredicted RBP16.69■□□□□ 0.26
VDR-208ENST00000550325 SMARCA4P51532 1647 aa16.67■□□□□ 0.26
VDR-208ENST00000550325 TONSLQ96HA7 1378 aa16.66■□□□□ 0.26
VDR-208ENST00000550325 RRBP1Q9P2E9 1410 aaKnown RBP16.66■□□□□ 0.26
VDR-208ENST00000550325 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.66■□□□□ 0.26
VDR-208ENST00000550325 P3H3Q8IVL6 736 aa16.65■□□□□ 0.26
VDR-208ENST00000550325 SETD5Q9C0A6 1442 aa16.65■□□□□ 0.26
VDR-208ENST00000550325 NPM2Q86SE8 214 aaKnown RBP16.64■□□□□ 0.26
VDR-208ENST00000550325 ANP32AP39687 249 aaKnown RBP16.64■□□□□ 0.25
VDR-208ENST00000550325 ARAP1Q96P48 1450 aa16.64■□□□□ 0.25
VDR-208ENST00000550325 MAPKBP1O60336 1514 aa16.62■□□□□ 0.25
VDR-208ENST00000550325 IL27Q8NEV9 243 aa16.61■□□□□ 0.25
VDR-208ENST00000550325 ZBTB47Q9UFB7 747 aaPredicted RBP16.61■□□□□ 0.25
VDR-208ENST00000550325 MRS2Q9HD23 443 aa16.57■□□□□ 0.24
VDR-208ENST00000550325 CCDC184Q52MB2 194 aa16.56■□□□□ 0.24
VDR-208ENST00000550325 POLR3GLQ9BT43 218 aa16.55■□□□□ 0.24
VDR-208ENST00000550325 LAS1LQ9Y4W2 734 aaKnown RBP16.54■□□□□ 0.24
VDR-208ENST00000550325 EIF5BO60841 1220 aaKnown RBP16.51■□□□□ 0.23
VDR-208ENST00000550325 CUX2O14529 1486 aa16.5■□□□□ 0.23
VDR-208ENST00000550325 IPO9Q96P70 1041 aaKnown RBP16.49■□□□□ 0.23
VDR-208ENST00000550325 TIMELESSQ9UNS1 1208 aa16.49■□□□□ 0.23
VDR-208ENST00000550325 ERICH6BQ5W0A0 696 aa16.48■□□□□ 0.23
VDR-208ENST00000550325 HSPA5P11021 654 aaKnown RBP16.47■□□□□ 0.23
VDR-208ENST00000550325 PHLDB1Q86UU1 1377 aa16.46■□□□□ 0.23
VDR-208ENST00000550325 NEFMP07197 916 aa16.45■□□□□ 0.22
VDR-208ENST00000550325 WASHC2AQ641Q2 1341 aa16.42■□□□□ 0.22
VDR-208ENST00000550325 ARHGAP35Q9NRY4 1499 aa16.41■□□□□ 0.22
VDR-208ENST00000550325 PRXQ9BXM0 1461 aa16.4■□□□□ 0.22
VDR-208ENST00000550325 EIF4G2P78344 907 aaKnown RBP eCLIP16.39■□□□□ 0.22
VDR-208ENST00000550325 KIF27Q86VH2 1401 aa16.37■□□□□ 0.21
VDR-208ENST00000550325 CHIC2Q9UKJ5 165 aa16.37■□□□□ 0.21
VDR-208ENST00000550325 AKNAQ7Z591 1439 aa16.35■□□□□ 0.21
VDR-208ENST00000550325 PRKRIP1Q9H875 184 aaPredicted RBP16.35■□□□□ 0.21
VDR-208ENST00000550325 ZBED9Q6R2W3 1325 aa16.34■□□□□ 0.21
VDR-208ENST00000550325 RRP7BPQ9NSQ0 103 aa16.33■□□□□ 0.2
VDR-208ENST00000550325 ERICH3Q5RHP9 1530 aa16.33■□□□□ 0.2
VDR-208ENST00000550325 LRRC9Q6ZRR7 1453 aa16.3■□□□□ 0.2
VDR-208ENST00000550325 BRPF3Q9ULD4 1205 aa16.29■□□□□ 0.2
VDR-208ENST00000550325 FOXD1Q16676 465 aa16.29■□□□□ 0.2
VDR-208ENST00000550325 DNAJC5BQ9UF47 199 aa16.29■□□□□ 0.2
VDR-208ENST00000550325 C11orf95C9JLR9 678 aaPredicted RBP16.28■□□□□ 0.2
VDR-208ENST00000550325 ZNF326Q5BKZ1 582 aaKnown RBP16.28■□□□□ 0.2
VDR-208ENST00000550325 DAXXQ9UER7 740 aaPredicted RBP16.26■□□□□ 0.19
VDR-208ENST00000550325 TIAM1Q13009 1591 aa16.26■□□□□ 0.19
VDR-208ENST00000550325 TOP2BQ02880 1626 aa16.26■□□□□ 0.19
VDR-208ENST00000550325 NUDCQ9Y266 331 aa16.25■□□□□ 0.19
VDR-208ENST00000550325 CCDC18Q5T9S5 1454 aa16.24■□□□□ 0.19
VDR-208ENST00000550325 PRDM2Q13029 1718 aa16.23■□□□□ 0.19
VDR-208ENST00000550325 CNTLNQ9NXG0 1405 aa16.22■□□□□ 0.19
VDR-208ENST00000550325 FHAD1B1AJZ9 1412 aa16.22■□□□□ 0.19
VDR-208ENST00000550325 SLC4A3P48751 1232 aa16.22■□□□□ 0.19
VDR-208ENST00000550325 L3MBTL2Q969R5 705 aa16.21■□□□□ 0.19
VDR-208ENST00000550325 ATAD2BQ9ULI0 1458 aa16.2■□□□□ 0.18
VDR-208ENST00000550325 PDE4AP27815 886 aa16.2■□□□□ 0.18
VDR-208ENST00000550325 TMC1Q8TDI8 760 aa16.19■□□□□ 0.18
VDR-208ENST00000550325 MTUS2Q5JR59 1369 aa16.19■□□□□ 0.18
VDR-208ENST00000550325 EXOC6Q8TAG9 804 aa16.19■□□□□ 0.18
VDR-208ENST00000550325 PPM1GO15355 546 aaPredicted RBP16.19■□□□□ 0.18
VDR-208ENST00000550325 SKAP1Q86WV1 359 aa16.17■□□□□ 0.18
VDR-208ENST00000550325 FHOD3Q2V2M9 1422 aa16.17■□□□□ 0.18
VDR-208ENST00000550325 CCDC7Q96M83 1385 aa16.17■□□□□ 0.18
VDR-208ENST00000550325 CARMIL1Q5VZK9 1371 aa16.16■□□□□ 0.18
VDR-208ENST00000550325 ARID3CA6NKF2 412 aa16.16■□□□□ 0.18
VDR-208ENST00000550325 UACAQ9BZF9 1416 aa16.15■□□□□ 0.18
VDR-208ENST00000550325 FBLN2P98095 1184 aa16.14■□□□□ 0.17
VDR-208ENST00000550325 HMGXB3Q12766 1538 aa16.14■□□□□ 0.17
VDR-208ENST00000550325 GSE1Q14687 1217 aa16.13■□□□□ 0.17
VDR-208ENST00000550325 KIF7Q2M1P5 1343 aa16.13■□□□□ 0.17
VDR-208ENST00000550325 USP35Q9P2H5 1018 aa16.13■□□□□ 0.17
VDR-208ENST00000550325 UBE2Q2Q8WVN8 375 aa16.12■□□□□ 0.17
VDR-208ENST00000550325 TCERG1O14776 1098 aaKnown RBP16.12■□□□□ 0.17
VDR-208ENST00000550325 AQRO60306 1485 aaKnown RBP eCLIP16.11■□□□□ 0.17
VDR-208ENST00000550325 IGF1RP08069 1367 aa16.11■□□□□ 0.17
VDR-208ENST00000550325 CUX1P39880 1505 aa16.11■□□□□ 0.17
VDR-208ENST00000550325 SMG6Q86US8 1419 aaKnown RBP16.11■□□□□ 0.17
VDR-208ENST00000550325 FRAT1Q92837 279 aaPredicted RBP16.1■□□□□ 0.17
VDR-208ENST00000550325 ARXQ96QS3 562 aa16.1■□□□□ 0.17
VDR-208ENST00000550325 FGD6Q6ZV73 1430 aa16.09■□□□□ 0.17
VDR-208ENST00000550325 PTPRKQ15262 1439 aa16.09■□□□□ 0.17
VDR-208ENST00000550325 NBPF8Q3BBV2 869 aa16.08■□□□□ 0.17
VDR-208ENST00000550325 MPHOSPH9Q99550 1183 aa16.08■□□□□ 0.16
VDR-208ENST00000550325 NFKBIBQ15653 356 aa16.08■□□□□ 0.16
VDR-208ENST00000550325 PLIN1O60240 522 aa16.07■□□□□ 0.16
VDR-208ENST00000550325 FMN1Q68DA7 1419 aa16.07■□□□□ 0.16
VDR-208ENST00000550325 BACH2Q9BYV9 841 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms