RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-208ENST00000549550 JPH4Q96JJ6 628 aa27.69■■■□□ 2.02
TCHP-208ENST00000549550 ABCC10Q5T3U5 1492 aa27.58■■■□□ 2.01
TCHP-208ENST00000549550 MAPKBP1O60336 1514 aa27.57■■■□□ 2
TCHP-208ENST00000549550 ADCY10Q96PN6 1610 aa27.57■■■□□ 2
TCHP-208ENST00000549550 DIP2BQ9P265 1576 aa27.56■■■□□ 2
TCHP-208ENST00000549550 FAM69CQ0P6D2 419 aa27.55■■■□□ 2
TCHP-208ENST00000549550 NPM1P06748 294 aaKnown RBP eCLIP27.53■■■□□ 2
TCHP-208ENST00000549550 KIAA0586Q9BVV6 1533 aa27.46■■□□□ 1.99
TCHP-208ENST00000549550 TSPOAP1O95153 1857 aa27.46■■□□□ 1.99
TCHP-208ENST00000549550 CUL7Q14999 1698 aa27.46■■□□□ 1.99
TCHP-208ENST00000549550 KDM6BO15054 1643 aa27.42■■□□□ 1.98
TCHP-208ENST00000549550 IGF1RP08069 1367 aa27.39■■□□□ 1.98
TCHP-208ENST00000549550 KIF27Q86VH2 1401 aa27.37■■□□□ 1.97
TCHP-208ENST00000549550 PTPRGP23470 1445 aa27.27■■□□□ 1.96
TCHP-208ENST00000549550 KDM4FA0A1W2PPD8 638 aa27.25■■□□□ 1.95
TCHP-208ENST00000549550 TTBK1Q5TCY1 1321 aaPredicted RBP27.22■■□□□ 1.95
TCHP-208ENST00000549550 CARMIL1Q5VZK9 1371 aa27.21■■□□□ 1.95
TCHP-208ENST00000549550 ABCC2Q92887 1545 aa27.21■■□□□ 1.95
TCHP-208ENST00000549550 CARMIL2Q6F5E8 1435 aa27.2■■□□□ 1.94
TCHP-208ENST00000549550 IQGAP2Q13576 1575 aa27.19■■□□□ 1.94
TCHP-208ENST00000549550 TNIKQ9UKE5 1360 aa27.19■■□□□ 1.94
TCHP-208ENST00000549550 PPRC1Q5VV67 1664 aaKnown RBP27.18■■□□□ 1.94
TCHP-208ENST00000549550 ASXL2Q76L83 1435 aa27.15■■□□□ 1.94
TCHP-208ENST00000549550 GLI2P10070 1586 aa27.14■■□□□ 1.93
TCHP-208ENST00000549550 PLB1Q6P1J6 1458 aa27.13■■□□□ 1.93
TCHP-208ENST00000549550 UHRF1BP1LA0JNW5 1464 aa27.1■■□□□ 1.93
TCHP-208ENST00000549550 DISP1Q96F81 1524 aa27.06■■□□□ 1.92
TCHP-208ENST00000549550 UACAQ9BZF9 1416 aa27.06■■□□□ 1.92
TCHP-208ENST00000549550 MAP3K4Q9Y6R4 1608 aa27.03■■□□□ 1.92
TCHP-208ENST00000549550 ZCCHC11Q5TAX3 1644 aaKnown RBP27■■□□□ 1.91
TCHP-208ENST00000549550 EPRSP07814 1512 aaKnown RBP26.99■■□□□ 1.91
TCHP-208ENST00000549550 KDM5BQ9UGL1 1544 aa26.99■■□□□ 1.91
TCHP-208ENST00000549550 ADGRL1O94910 1474 aa26.99■■□□□ 1.91
TCHP-208ENST00000549550 UGGT2Q9NYU1 1516 aa26.98■■□□□ 1.91
TCHP-208ENST00000549550 COL17A1Q9UMD9 1497 aaPredicted RBP26.95■■□□□ 1.91
TCHP-208ENST00000549550 KIAA0556O60303 1618 aa26.95■■□□□ 1.91
TCHP-208ENST00000549550 RAPGEF2Q9Y4G8 1499 aa26.93■■□□□ 1.9
TCHP-208ENST00000549550 TEX14Q8IWB6 1497 aa26.92■■□□□ 1.9
TCHP-208ENST00000549550 CTTNBP2Q8WZ74 1663 aa26.86■■□□□ 1.89
TCHP-208ENST00000549550 WDR7Q9Y4E6 1490 aa26.83■■□□□ 1.89
TCHP-208ENST00000549550 ILDR1Q86SU0 546 aaPredicted RBP26.83■■□□□ 1.89
TCHP-208ENST00000549550 HECW2Q9P2P5 1572 aa26.77■■□□□ 1.88
TCHP-208ENST00000549550 CFAP43Q8NDM7 1665 aa26.76■■□□□ 1.87
TCHP-208ENST00000549550 ABCA8O94911 1581 aa26.71■■□□□ 1.87
TCHP-208ENST00000549550 GOLGA3Q08378 1498 aa26.71■■□□□ 1.87
TCHP-208ENST00000549550 MAGI3Q5TCQ9 1506 aa26.7■■□□□ 1.86
TCHP-208ENST00000549550 CD109Q6YHK3 1445 aa26.69■■□□□ 1.86
TCHP-208ENST00000549550 KCNH8Q96L42 1107 aa26.65■■□□□ 1.86
TCHP-208ENST00000549550 KIF21BO75037 1637 aa26.61■■□□□ 1.85
TCHP-208ENST00000549550 PRXQ9BXM0 1461 aa26.55■■□□□ 1.84
TCHP-208ENST00000549550 ARAP3Q8WWN8 1544 aa26.5■■□□□ 1.83
TCHP-208ENST00000549550 ARID3CA6NKF2 412 aa26.47■■□□□ 1.83
TCHP-208ENST00000549550 ABCA9Q8IUA7 1624 aa26.47■■□□□ 1.83
TCHP-208ENST00000549550 ATP10BO94823 1461 aa26.46■■□□□ 1.83
TCHP-208ENST00000549550 P3H3Q8IVL6 736 aa26.42■■□□□ 1.82
TCHP-208ENST00000549550 FAM9AQ8IZU1 332 aaPredicted RBP26.42■■□□□ 1.82
TCHP-208ENST00000549550 ADAMTSL3P82987 1691 aa26.39■■□□□ 1.82
TCHP-208ENST00000549550 SAMD9Q5K651 1589 aa26.39■■□□□ 1.82
TCHP-208ENST00000549550 RAPGEF6Q8TEU7 1601 aa26.38■■□□□ 1.81
TCHP-208ENST00000549550 PHLDB1Q86UU1 1377 aa26.36■■□□□ 1.81
TCHP-208ENST00000549550 PTPRMP28827 1452 aa26.33■■□□□ 1.81
TCHP-208ENST00000549550 NEO1Q92859 1461 aa26.32■■□□□ 1.8
TCHP-208ENST00000549550 FRMPD1Q5SYB0 1578 aa26.32■■□□□ 1.8
TCHP-208ENST00000549550 RAPGEF3O95398 923 aa26.31■■□□□ 1.8
TCHP-208ENST00000549550 BCORL1Q5H9F3 1711 aa26.31■■□□□ 1.8
TCHP-208ENST00000549550 MADDQ8WXG6 1647 aa26.26■■□□□ 1.79
TCHP-208ENST00000549550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.26■■□□□ 1.79
TCHP-208ENST00000549550 HNRNPUL2Q1KMD3 747 aaKnown RBP26.26■■□□□ 1.79
TCHP-208ENST00000549550 NUP153P49790 1475 aaKnown RBP26.24■■□□□ 1.79
TCHP-208ENST00000549550 FBXO41Q8TF61 875 aa26.21■■□□□ 1.79
TCHP-208ENST00000549550 CSRNP3Q8WYN3 585 aa26.21■■□□□ 1.79
TCHP-208ENST00000549550 RICTORQ6R327 1708 aa26.21■■□□□ 1.79
TCHP-208ENST00000549550 ARHGEF40Q8TER5 1519 aa26.19■■□□□ 1.78
TCHP-208ENST00000549550 ARID4BQ4LE39 1312 aaPredicted RBP26.19■■□□□ 1.78
TCHP-208ENST00000549550 PCF11O94913 1555 aaKnown RBP26.18■■□□□ 1.78
TCHP-208ENST00000549550 RIMS1Q86UR5 1692 aaKnown RBP26.18■■□□□ 1.78
TCHP-208ENST00000549550 FHOD3Q2V2M9 1422 aa26.15■■□□□ 1.78
TCHP-208ENST00000549550 CFAP74Q9C0B2 1584 aa26.15■■□□□ 1.78
TCHP-208ENST00000549550 RANGAP1P46060 587 aaPredicted RBP26.14■■□□□ 1.78
TCHP-208ENST00000549550 LMTK3Q96Q04 1460 aa26.14■■□□□ 1.78
TCHP-208ENST00000549550 DENND4BO75064 1496 aaPredicted RBP26.12■■□□□ 1.77
TCHP-208ENST00000549550 FANCAO15360 1455 aa26.1■■□□□ 1.77
TCHP-208ENST00000549550 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.09■■□□□ 1.77
TCHP-208ENST00000549550 AKNAQ7Z591 1439 aa26.09■■□□□ 1.77
TCHP-208ENST00000549550 PLEKHD1A6NEE1 506 aa26.09■■□□□ 1.77
TCHP-208ENST00000549550 TTC37Q6PGP7 1564 aa26.08■■□□□ 1.77
TCHP-208ENST00000549550 SIGLEC1Q9BZZ2 1709 aa26.07■■□□□ 1.76
TCHP-208ENST00000549550 ZMYM4Q5VZL5 1548 aa26.06■■□□□ 1.76
TCHP-208ENST00000549550 EEA1Q15075 1411 aa26.05■■□□□ 1.76
TCHP-208ENST00000549550 EFCAB5A4FU69 1503 aa26.03■■□□□ 1.76
TCHP-208ENST00000549550 ZFYVE16Q7Z3T8 1539 aa26.02■■□□□ 1.76
TCHP-208ENST00000549550 POGZQ7Z3K3 1410 aa26■■□□□ 1.75
TCHP-208ENST00000549550 YEATS2Q9ULM3 1422 aa25.99■■□□□ 1.75
TCHP-208ENST00000549550 FER1L4A9Z1Z3 1794 aa25.99■■□□□ 1.75
TCHP-208ENST00000549550 HECW1Q76N89 1606 aa25.97■■□□□ 1.75
TCHP-208ENST00000549550 CDK13Q14004 1512 aaKnown RBP25.97■■□□□ 1.75
TCHP-208ENST00000549550 HSPA2P54652 639 aa25.96■■□□□ 1.75
TCHP-208ENST00000549550 PLPPR3Q6T4P5 718 aa25.96■■□□□ 1.75
TCHP-208ENST00000549550 MAGI2Q86UL8 1455 aa25.95■■□□□ 1.74
TCHP-208ENST00000549550 MYO5CQ9NQX4 1742 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms