RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 NUP160Q12769 1436 aa15.7■□□□□ 0.1
SMARCD1-207ENST00000549526 PRG4Q92954 1404 aaPredicted RBP15.69■□□□□ 0.1
SMARCD1-207ENST00000549526 CUX1P39880 1505 aa15.69■□□□□ 0.1
SMARCD1-207ENST00000549526 SOCS7O14512 581 aa15.66■□□□□ 0.1
SMARCD1-207ENST00000549526 ABCA5Q8WWZ7 1642 aa15.65■□□□□ 0.1
SMARCD1-207ENST00000549526 JPH4Q96JJ6 628 aa15.65■□□□□ 0.1
SMARCD1-207ENST00000549526 ADCY10Q96PN6 1610 aa15.61■□□□□ 0.09
SMARCD1-207ENST00000549526 ABCA10Q8WWZ4 1543 aa15.6■□□□□ 0.09
SMARCD1-207ENST00000549526 ILDR2Q71H61 639 aa15.6■□□□□ 0.09
SMARCD1-207ENST00000549526 ADAMTS12P58397 1594 aa15.6■□□□□ 0.09
SMARCD1-207ENST00000549526 FHAD1B1AJZ9 1412 aa15.55■□□□□ 0.08
SMARCD1-207ENST00000549526 DISP3Q9P2K9 1392 aa15.53■□□□□ 0.08
SMARCD1-207ENST00000549526 PPRC1Q5VV67 1664 aaKnown RBP15.5■□□□□ 0.07
SMARCD1-207ENST00000549526 TOP2BQ02880 1626 aa15.5■□□□□ 0.07
SMARCD1-207ENST00000549526 COL17A1Q9UMD9 1497 aaPredicted RBP15.48■□□□□ 0.07
SMARCD1-207ENST00000549526 TTBK1Q5TCY1 1321 aaPredicted RBP15.43■□□□□ 0.06
SMARCD1-207ENST00000549526 WRNQ14191 1432 aaPredicted RBP eCLIP15.42■□□□□ 0.06
SMARCD1-207ENST00000549526 GLI2P10070 1586 aa15.41■□□□□ 0.06
SMARCD1-207ENST00000549526 RUSC2Q8N2Y8 1516 aa15.4■□□□□ 0.06
SMARCD1-207ENST00000549526 ASXL2Q76L83 1435 aa15.4■□□□□ 0.06
SMARCD1-207ENST00000549526 ERICH3Q5RHP9 1530 aa15.39■□□□□ 0.05
SMARCD1-207ENST00000549526 PLB1Q6P1J6 1458 aa15.39■□□□□ 0.05
SMARCD1-207ENST00000549526 TEX14Q8IWB6 1497 aa15.36■□□□□ 0.05
SMARCD1-207ENST00000549526 PTPRGP23470 1445 aa15.34■□□□□ 0.05
SMARCD1-207ENST00000549526 CERKQ8TCT0 537 aa15.34■□□□□ 0.05
SMARCD1-207ENST00000549526 ABCC2Q92887 1545 aa15.33■□□□□ 0.05
SMARCD1-207ENST00000549526 MAP3K4Q9Y6R4 1608 aa15.32■□□□□ 0.04
SMARCD1-207ENST00000549526 CUL7Q14999 1698 aa15.32■□□□□ 0.04
SMARCD1-207ENST00000549526 KIF21BO75037 1637 aa15.28■□□□□ 0.04
SMARCD1-207ENST00000549526 EPRSP07814 1512 aaKnown RBP15.27■□□□□ 0.04
SMARCD1-207ENST00000549526 KIAA0586Q9BVV6 1533 aa15.27■□□□□ 0.03
SMARCD1-207ENST00000549526 PTPRMP28827 1452 aa15.27■□□□□ 0.03
SMARCD1-207ENST00000549526 PCF11O94913 1555 aaKnown RBP15.24■□□□□ 0.03
SMARCD1-207ENST00000549526 SPATA31D1Q6ZQQ2 1576 aa15.24■□□□□ 0.03
SMARCD1-207ENST00000549526 TNIKQ9UKE5 1360 aa15.21■□□□□ 0.02
SMARCD1-207ENST00000549526 BIVM-ERCC5R4GMW8 1640 aa15.2■□□□□ 0.02
SMARCD1-207ENST00000549526 HSPA2P54652 639 aa15.19■□□□□ 0.02
SMARCD1-207ENST00000549526 UHRF1BP1LA0JNW5 1464 aa15.19■□□□□ 0.02
SMARCD1-207ENST00000549526 CARMIL2Q6F5E8 1435 aa15.18■□□□□ 0.02
SMARCD1-207ENST00000549526 ADAMTSL3P82987 1691 aa15.18■□□□□ 0.02
SMARCD1-207ENST00000549526 UACAQ9BZF9 1416 aa15.17■□□□□ 0.02
SMARCD1-207ENST00000549526 KDM5BQ9UGL1 1544 aa15.13■□□□□ 0.01
SMARCD1-207ENST00000549526 CD109Q6YHK3 1445 aa15.13■□□□□ 0.01
SMARCD1-207ENST00000549526 ZCCHC11Q5TAX3 1644 aaKnown RBP15.13■□□□□ 0.01
SMARCD1-207ENST00000549526 KCNH8Q96L42 1107 aa15.11■□□□□ 0.01
SMARCD1-207ENST00000549526 ARID4BQ4LE39 1312 aaPredicted RBP15.11■□□□□ 0.01
SMARCD1-207ENST00000549526 PLPPR3Q6T4P5 718 aa15.1■□□□□ 0.01
SMARCD1-207ENST00000549526 MAGI3Q5TCQ9 1506 aa15.1■□□□□ 0.01
SMARCD1-207ENST00000549526 MADDQ8WXG6 1647 aa15.08■□□□□ 0
SMARCD1-207ENST00000549526 WDR7Q9Y4E6 1490 aa15.08■□□□□ 0
SMARCD1-207ENST00000549526 CFAP43Q8NDM7 1665 aa15.07■□□□□ 0
SMARCD1-207ENST00000549526 BCORL1Q5H9F3 1711 aa15.06■□□□□ 0
SMARCD1-207ENST00000549526 IGF1RP08069 1367 aa15.03■□□□□ -0
SMARCD1-207ENST00000549526 RIMS1Q86UR5 1692 aaKnown RBP15.03■□□□□ -0
SMARCD1-207ENST00000549526 ARAP3Q8WWN8 1544 aa15.02■□□□□ -0
SMARCD1-207ENST00000549526 IQGAP2Q13576 1575 aa14.98□□□□□ -0.01
SMARCD1-207ENST00000549526 RAPGEF3O95398 923 aa14.98□□□□□ -0.01
SMARCD1-207ENST00000549526 DISP1Q96F81 1524 aa14.97□□□□□ -0.01
SMARCD1-207ENST00000549526 DMRT2Q9Y5R5 561 aa14.97□□□□□ -0.01
SMARCD1-207ENST00000549526 CARMIL1Q5VZK9 1371 aa14.91□□□□□ -0.02
SMARCD1-207ENST00000549526 KIF27Q86VH2 1401 aa14.91□□□□□ -0.02
SMARCD1-207ENST00000549526 PHLDB1Q86UU1 1377 aa14.9□□□□□ -0.02
SMARCD1-207ENST00000549526 YEATS2Q9ULM3 1422 aa14.89□□□□□ -0.03
SMARCD1-207ENST00000549526 STRCQ7RTU9 1775 aa14.87□□□□□ -0.03
SMARCD1-207ENST00000549526 KIAA0556O60303 1618 aa14.84□□□□□ -0.03
SMARCD1-207ENST00000549526 POGZQ7Z3K3 1410 aa14.84□□□□□ -0.03
SMARCD1-207ENST00000549526 MLECQ14165 292 aa14.84□□□□□ -0.03
SMARCD1-207ENST00000549526 UGGT2Q9NYU1 1516 aa14.83□□□□□ -0.04
SMARCD1-207ENST00000549526 PREX1Q8TCU6 1659 aa14.82□□□□□ -0.04
SMARCD1-207ENST00000549526 FRMPD1Q5SYB0 1578 aa14.81□□□□□ -0.04
SMARCD1-207ENST00000549526 ARID3CA6NKF2 412 aa14.8□□□□□ -0.04
SMARCD1-207ENST00000549526 FANCAO15360 1455 aa14.8□□□□□ -0.04
SMARCD1-207ENST00000549526 FER1L4A9Z1Z3 1794 aa14.79□□□□□ -0.04
SMARCD1-207ENST00000549526 NEO1Q92859 1461 aa14.79□□□□□ -0.04
SMARCD1-207ENST00000549526 ARHGEF40Q8TER5 1519 aa14.77□□□□□ -0.04
SMARCD1-207ENST00000549526 IQSEC2Q5JU85 1478 aa14.77□□□□□ -0.04
SMARCD1-207ENST00000549526 UBAP1LF5GYI3 381 aa14.77□□□□□ -0.05
SMARCD1-207ENST00000549526 CEBPAP49715 358 aaPredicted RBP14.77□□□□□ -0.05
SMARCD1-207ENST00000549526 ABCA9Q8IUA7 1624 aa14.77□□□□□ -0.05
SMARCD1-207ENST00000549526 ABCA8O94911 1581 aa14.77□□□□□ -0.05
SMARCD1-207ENST00000549526 LTBP4Q8N2S1 1624 aa14.76□□□□□ -0.05
SMARCD1-207ENST00000549526 TTC37Q6PGP7 1564 aa14.76□□□□□ -0.05
SMARCD1-207ENST00000549526 PTPRTO14522 1441 aa14.75□□□□□ -0.05
SMARCD1-207ENST00000549526 SUPT5HO00267 1087 aaKnown RBP14.75□□□□□ -0.05
SMARCD1-207ENST00000549526 AKNAQ7Z591 1439 aa14.74□□□□□ -0.05
SMARCD1-207ENST00000549526 SIGLEC1Q9BZZ2 1709 aa14.72□□□□□ -0.05
SMARCD1-207ENST00000549526 FAM9AQ8IZU1 332 aaPredicted RBP14.72□□□□□ -0.05
SMARCD1-207ENST00000549526 DENND4BO75064 1496 aaPredicted RBP14.71□□□□□ -0.05
SMARCD1-207ENST00000549526 PHF23Q9BUL5 403 aaPredicted RBP14.71□□□□□ -0.05
SMARCD1-207ENST00000549526 UHRF1BP1Q6BDS2 1440 aa14.71□□□□□ -0.05
SMARCD1-207ENST00000549526 MED1Q15648 1581 aaPredicted RBP14.71□□□□□ -0.05
SMARCD1-207ENST00000549526 RICTORQ6R327 1708 aa14.71□□□□□ -0.05
SMARCD1-207ENST00000549526 SETD1BQ9UPS6 1966 aaKnown RBP14.71□□□□□ -0.06
SMARCD1-207ENST00000549526 ATP10BO94823 1461 aa14.69□□□□□ -0.06
SMARCD1-207ENST00000549526 GOLGA3Q08378 1498 aa14.68□□□□□ -0.06
SMARCD1-207ENST00000549526 ZFYVE16Q7Z3T8 1539 aa14.66□□□□□ -0.06
SMARCD1-207ENST00000549526 RAPGEF2Q9Y4G8 1499 aa14.66□□□□□ -0.06
SMARCD1-207ENST00000549526 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.66□□□□□ -0.06
SMARCD1-207ENST00000549526 HNRNPUL2Q1KMD3 747 aaKnown RBP14.66□□□□□ -0.06
SMARCD1-207ENST00000549526 FHOD3Q2V2M9 1422 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms