RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 JPH4Q96JJ6 628 aa19.55■□□□□ 0.72
BEST3-209ENST00000548658 SHROOM2Q13796 1616 aa19.53■□□□□ 0.72
BEST3-209ENST00000548658 CUL7Q14999 1698 aa19.52■□□□□ 0.71
BEST3-209ENST00000548658 PRG4Q92954 1404 aaPredicted RBP19.48■□□□□ 0.71
BEST3-209ENST00000548658 CARMIL1Q5VZK9 1371 aa19.47■□□□□ 0.71
BEST3-209ENST00000548658 ERCC6L2Q5T890 1561 aa19.47■□□□□ 0.71
BEST3-209ENST00000548658 KIAA0586Q9BVV6 1533 aa19.46■□□□□ 0.71
BEST3-209ENST00000548658 RUSC2Q8N2Y8 1516 aa19.44■□□□□ 0.7
BEST3-209ENST00000548658 NPM1P06748 294 aaKnown RBP eCLIP19.32■□□□□ 0.68
BEST3-209ENST00000548658 RAPGEF2Q9Y4G8 1499 aa19.32■□□□□ 0.68
BEST3-209ENST00000548658 CARMIL2Q6F5E8 1435 aa19.3■□□□□ 0.68
BEST3-209ENST00000548658 IQGAP2Q13576 1575 aa19.26■□□□□ 0.67
BEST3-209ENST00000548658 PTPRGP23470 1445 aa19.25■□□□□ 0.67
BEST3-209ENST00000548658 TNIKQ9UKE5 1360 aa19.22■□□□□ 0.67
BEST3-209ENST00000548658 ADCY10Q96PN6 1610 aa19.16■□□□□ 0.66
BEST3-209ENST00000548658 PRXQ9BXM0 1461 aa19.16■□□□□ 0.66
BEST3-209ENST00000548658 MAPKBP1O60336 1514 aa19.15■□□□□ 0.66
BEST3-209ENST00000548658 UGGT2Q9NYU1 1516 aa19.15■□□□□ 0.66
BEST3-209ENST00000548658 TTBK1Q5TCY1 1321 aaPredicted RBP19.15■□□□□ 0.66
BEST3-209ENST00000548658 CSRNP3Q8WYN3 585 aa19.14■□□□□ 0.65
BEST3-209ENST00000548658 DISP1Q96F81 1524 aa19.13■□□□□ 0.65
BEST3-209ENST00000548658 FAM69CQ0P6D2 419 aa19.12■□□□□ 0.65
BEST3-209ENST00000548658 ABCC10Q5T3U5 1492 aa19.11■□□□□ 0.65
BEST3-209ENST00000548658 EEA1Q15075 1411 aa19.1■□□□□ 0.65
BEST3-209ENST00000548658 FOXD1Q16676 465 aa19.1■□□□□ 0.65
BEST3-209ENST00000548658 UHRF1BP1LA0JNW5 1464 aa19.09■□□□□ 0.65
BEST3-209ENST00000548658 UACAQ9BZF9 1416 aa19.08■□□□□ 0.65
BEST3-209ENST00000548658 KIF13AQ9H1H9 1805 aa19.08■□□□□ 0.64
BEST3-209ENST00000548658 ABCC2Q92887 1545 aa19.08■□□□□ 0.64
BEST3-209ENST00000548658 GOLGA3Q08378 1498 aa19.08■□□□□ 0.64
BEST3-209ENST00000548658 CTTNBP2Q8WZ74 1663 aa19.08■□□□□ 0.64
BEST3-209ENST00000548658 FAM9AQ8IZU1 332 aaPredicted RBP19.07■□□□□ 0.64
BEST3-209ENST00000548658 KIAA0556O60303 1618 aa19.06■□□□□ 0.64
BEST3-209ENST00000548658 PLB1Q6P1J6 1458 aa19.02■□□□□ 0.63
BEST3-209ENST00000548658 DIP2BQ9P265 1576 aa19.02■□□□□ 0.63
BEST3-209ENST00000548658 PLPPR3Q6T4P5 718 aa18.99■□□□□ 0.63
BEST3-209ENST00000548658 KDM5BQ9UGL1 1544 aa18.98■□□□□ 0.63
BEST3-209ENST00000548658 ASXL2Q76L83 1435 aa18.98■□□□□ 0.63
BEST3-209ENST00000548658 GLI2P10070 1586 aa18.9■□□□□ 0.62
BEST3-209ENST00000548658 P3H3Q8IVL6 736 aa18.88■□□□□ 0.61
BEST3-209ENST00000548658 ABCA8O94911 1581 aa18.88■□□□□ 0.61
BEST3-209ENST00000548658 ZCCHC11Q5TAX3 1644 aaKnown RBP18.88■□□□□ 0.61
BEST3-209ENST00000548658 EPRSP07814 1512 aaKnown RBP18.86■□□□□ 0.61
BEST3-209ENST00000548658 TSPOAP1O95153 1857 aa18.86■□□□□ 0.61
BEST3-209ENST00000548658 KIF21BO75037 1637 aa18.85■□□□□ 0.61
BEST3-209ENST00000548658 WDR7Q9Y4E6 1490 aa18.84■□□□□ 0.61
BEST3-209ENST00000548658 SAMD9Q5K651 1589 aa18.83■□□□□ 0.6
BEST3-209ENST00000548658 KDM6BO15054 1643 aa18.82■□□□□ 0.6
BEST3-209ENST00000548658 RANGAP1P46060 587 aaPredicted RBP18.8■□□□□ 0.6
BEST3-209ENST00000548658 TEX14Q8IWB6 1497 aa18.79■□□□□ 0.6
BEST3-209ENST00000548658 UBTFP17480 764 aaKnown RBP18.79■□□□□ 0.6
BEST3-209ENST00000548658 KCNH8Q96L42 1107 aa18.78■□□□□ 0.6
BEST3-209ENST00000548658 MAP3K4Q9Y6R4 1608 aa18.77■□□□□ 0.6
BEST3-209ENST00000548658 ATP10BO94823 1461 aa18.75■□□□□ 0.59
BEST3-209ENST00000548658 EFCAB5A4FU69 1503 aa18.74■□□□□ 0.59
BEST3-209ENST00000548658 PPRC1Q5VV67 1664 aaKnown RBP18.73■□□□□ 0.59
BEST3-209ENST00000548658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.73■□□□□ 0.59
BEST3-209ENST00000548658 HNRNPUL2Q1KMD3 747 aaKnown RBP18.73■□□□□ 0.59
BEST3-209ENST00000548658 CD109Q6YHK3 1445 aa18.73■□□□□ 0.59
BEST3-209ENST00000548658 RAPGEF6Q8TEU7 1601 aa18.72■□□□□ 0.59
BEST3-209ENST00000548658 ARID3CA6NKF2 412 aa18.72■□□□□ 0.59
BEST3-209ENST00000548658 FHOD3Q2V2M9 1422 aa18.72■□□□□ 0.59
BEST3-209ENST00000548658 CFAP43Q8NDM7 1665 aa18.69■□□□□ 0.58
BEST3-209ENST00000548658 MAGI3Q5TCQ9 1506 aa18.69■□□□□ 0.58
BEST3-209ENST00000548658 EHMT2Q96KQ7 1210 aa18.68■□□□□ 0.58
BEST3-209ENST00000548658 NUP153P49790 1475 aaKnown RBP18.66■□□□□ 0.58
BEST3-209ENST00000548658 PLEKHD1A6NEE1 506 aa18.66■□□□□ 0.58
BEST3-209ENST00000548658 COL17A1Q9UMD9 1497 aaPredicted RBP18.64■□□□□ 0.57
BEST3-209ENST00000548658 PHLDB1Q86UU1 1377 aa18.62■□□□□ 0.57
BEST3-209ENST00000548658 FMN1Q68DA7 1419 aa18.62■□□□□ 0.57
BEST3-209ENST00000548658 ABCA9Q8IUA7 1624 aa18.59■□□□□ 0.57
BEST3-209ENST00000548658 ARHGAP35Q9NRY4 1499 aa18.57■□□□□ 0.56
BEST3-209ENST00000548658 ARAP3Q8WWN8 1544 aa18.55■□□□□ 0.56
BEST3-209ENST00000548658 ATP1B4Q9UN42 357 aaPredicted RBP18.55■□□□□ 0.56
BEST3-209ENST00000548658 CDK11AQ9UQ88 783 aaPredicted RBP18.55■□□□□ 0.56
BEST3-209ENST00000548658 KDM4FA0A1W2PPD8 638 aa18.54■□□□□ 0.56
BEST3-209ENST00000548658 NEO1Q92859 1461 aa18.52■□□□□ 0.56
BEST3-209ENST00000548658 HECW1Q76N89 1606 aa18.49■□□□□ 0.55
BEST3-209ENST00000548658 CDK13Q14004 1512 aaKnown RBP18.46■□□□□ 0.55
BEST3-209ENST00000548658 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.44■□□□□ 0.54
BEST3-209ENST00000548658 RAPGEF3O95398 923 aa18.43■□□□□ 0.54
BEST3-209ENST00000548658 ADGRL1O94910 1474 aa18.43■□□□□ 0.54
BEST3-209ENST00000548658 FANCAO15360 1455 aa18.42■□□□□ 0.54
BEST3-209ENST00000548658 AKNAQ7Z591 1439 aa18.4■□□□□ 0.54
BEST3-209ENST00000548658 CASKIN1Q8WXD9 1431 aa18.4■□□□□ 0.54
BEST3-209ENST00000548658 CFAP74Q9C0B2 1584 aa18.4■□□□□ 0.54
BEST3-209ENST00000548658 CLIP1P30622 1438 aa18.4■□□□□ 0.54
BEST3-209ENST00000548658 PLCH2O75038 1416 aa18.39■□□□□ 0.53
BEST3-209ENST00000548658 DENND4BO75064 1496 aaPredicted RBP18.39■□□□□ 0.53
BEST3-209ENST00000548658 TROQ12816 1431 aaPredicted RBP18.38■□□□□ 0.53
BEST3-209ENST00000548658 CCDC18Q5T9S5 1454 aa18.38■□□□□ 0.53
BEST3-209ENST00000548658 TTC37Q6PGP7 1564 aa18.38■□□□□ 0.53
BEST3-209ENST00000548658 EFCAB2Q5VUJ9 269 aa18.37■□□□□ 0.53
BEST3-209ENST00000548658 KIF14Q15058 1648 aa18.34■□□□□ 0.53
BEST3-209ENST00000548658 FYCO1Q9BQS8 1478 aa18.33■□□□□ 0.52
BEST3-209ENST00000548658 PCF11O94913 1555 aaKnown RBP18.31■□□□□ 0.52
BEST3-209ENST00000548658 PPP6R1Q9UPN7 881 aa18.3■□□□□ 0.52
BEST3-209ENST00000548658 SCAPERQ9BY12 1400 aa18.3■□□□□ 0.52
BEST3-209ENST00000548658 FRMPD1Q5SYB0 1578 aa18.3■□□□□ 0.52
BEST3-209ENST00000548658 MYO5CQ9NQX4 1742 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms