RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 FHAD1B1AJZ9 1412 aa16.34■□□□□ 0.21
USP15-208ENST00000548524 CYB5RLQ6IPT4 315 aa16.33■□□□□ 0.2
USP15-208ENST00000548524 ERICH3Q5RHP9 1530 aa16.32■□□□□ 0.2
USP15-208ENST00000548524 POTEDQ86YR6 584 aa16.32■□□□□ 0.2
USP15-208ENST00000548524 CLASP1Q7Z460 1538 aa16.31■□□□□ 0.2
USP15-208ENST00000548524 GRIN2AQ12879 1464 aa16.31■□□□□ 0.2
USP15-208ENST00000548524 ADAMTS12P58397 1594 aa16.3■□□□□ 0.2
USP15-208ENST00000548524 KIF27Q86VH2 1401 aa16.29■□□□□ 0.2
USP15-208ENST00000548524 ARAP1Q96P48 1450 aa16.25■□□□□ 0.19
USP15-208ENST00000548524 NUP160Q12769 1436 aa16.24■□□□□ 0.19
USP15-208ENST00000548524 IGF1RP08069 1367 aa16.24■□□□□ 0.19
USP15-208ENST00000548524 DMRT2Q9Y5R5 561 aa16.22■□□□□ 0.19
USP15-208ENST00000548524 NPM3O75607 178 aaKnown RBP16.2■□□□□ 0.18
USP15-208ENST00000548524 CEP170Q5SW79 1584 aa16.2■□□□□ 0.18
USP15-208ENST00000548524 CARMIL1Q5VZK9 1371 aa16.15■□□□□ 0.18
USP15-208ENST00000548524 JPH4Q96JJ6 628 aa16.14■□□□□ 0.17
USP15-208ENST00000548524 CUL7Q14999 1698 aa16.11■□□□□ 0.17
USP15-208ENST00000548524 PRG4Q92954 1404 aaPredicted RBP16.1■□□□□ 0.17
USP15-208ENST00000548524 TRHP20396 242 aaPredicted RBP16.09■□□□□ 0.17
USP15-208ENST00000548524 ERCC6L2Q5T890 1561 aa16.09■□□□□ 0.17
USP15-208ENST00000548524 SHROOM2Q13796 1616 aa16.06■□□□□ 0.16
USP15-208ENST00000548524 RUSC2Q8N2Y8 1516 aa16.06■□□□□ 0.16
USP15-208ENST00000548524 KIAA0586Q9BVV6 1533 aa16.06■□□□□ 0.16
USP15-208ENST00000548524 RAPGEF2Q9Y4G8 1499 aa16.02■□□□□ 0.15
USP15-208ENST00000548524 RNF216Q9NWF9 866 aaPredicted RBP16■□□□□ 0.15
USP15-208ENST00000548524 CARMIL2Q6F5E8 1435 aa15.94■□□□□ 0.14
USP15-208ENST00000548524 TTBK1Q5TCY1 1321 aaPredicted RBP15.94■□□□□ 0.14
USP15-208ENST00000548524 NPM1P06748 294 aaKnown RBP eCLIP15.92■□□□□ 0.14
USP15-208ENST00000548524 CSRNP3Q8WYN3 585 aa15.92■□□□□ 0.14
USP15-208ENST00000548524 IQGAP2Q13576 1575 aa15.92■□□□□ 0.14
USP15-208ENST00000548524 HOXD11P31277 338 aaPredicted RBP15.91■□□□□ 0.14
USP15-208ENST00000548524 PTPRGP23470 1445 aa15.91■□□□□ 0.14
USP15-208ENST00000548524 PRXQ9BXM0 1461 aa15.9■□□□□ 0.14
USP15-208ENST00000548524 TNIKQ9UKE5 1360 aa15.89■□□□□ 0.13
USP15-208ENST00000548524 EEA1Q15075 1411 aa15.87■□□□□ 0.13
USP15-208ENST00000548524 FAM9AQ8IZU1 332 aaPredicted RBP15.87■□□□□ 0.13
USP15-208ENST00000548524 UGGT2Q9NYU1 1516 aa15.84■□□□□ 0.13
USP15-208ENST00000548524 DISP1Q96F81 1524 aa15.83■□□□□ 0.12
USP15-208ENST00000548524 SLC4A1APQ9BWU0 796 aaKnown RBP15.8■□□□□ 0.12
USP15-208ENST00000548524 ADCY10Q96PN6 1610 aa15.79■□□□□ 0.12
USP15-208ENST00000548524 GOLGA3Q08378 1498 aa15.78■□□□□ 0.12
USP15-208ENST00000548524 UACAQ9BZF9 1416 aa15.77■□□□□ 0.12
USP15-208ENST00000548524 FAM69CQ0P6D2 419 aa15.77■□□□□ 0.12
USP15-208ENST00000548524 KIAA0556O60303 1618 aa15.76■□□□□ 0.11
USP15-208ENST00000548524 MAPKBP1O60336 1514 aa15.74■□□□□ 0.11
USP15-208ENST00000548524 CTTNBP2Q8WZ74 1663 aa15.74■□□□□ 0.11
USP15-208ENST00000548524 ABCC2Q92887 1545 aa15.73■□□□□ 0.11
USP15-208ENST00000548524 UHRF1BP1LA0JNW5 1464 aa15.73■□□□□ 0.11
USP15-208ENST00000548524 P3H3Q8IVL6 736 aa15.73■□□□□ 0.11
USP15-208ENST00000548524 ABCC10Q5T3U5 1492 aa15.72■□□□□ 0.11
USP15-208ENST00000548524 RANGAP1P46060 587 aaPredicted RBP15.71■□□□□ 0.11
USP15-208ENST00000548524 EHMT2Q96KQ7 1210 aa15.7■□□□□ 0.1
USP15-208ENST00000548524 ASXL2Q76L83 1435 aa15.68■□□□□ 0.1
USP15-208ENST00000548524 PLB1Q6P1J6 1458 aa15.67■□□□□ 0.1
USP15-208ENST00000548524 UBTFP17480 764 aaKnown RBP15.66■□□□□ 0.1
USP15-208ENST00000548524 KDM5BQ9UGL1 1544 aa15.65■□□□□ 0.1
USP15-208ENST00000548524 KIF21BO75037 1637 aa15.65■□□□□ 0.1
USP15-208ENST00000548524 DIP2BQ9P265 1576 aa15.64■□□□□ 0.09
USP15-208ENST00000548524 KIF13AQ9H1H9 1805 aa15.61■□□□□ 0.09
USP15-208ENST00000548524 ARID3CA6NKF2 412 aa15.6■□□□□ 0.09
USP15-208ENST00000548524 ABCA8O94911 1581 aa15.6■□□□□ 0.09
USP15-208ENST00000548524 DCAF8L1A6NGE4 600 aa15.59■□□□□ 0.09
USP15-208ENST00000548524 SAMD9Q5K651 1589 aa15.58■□□□□ 0.09
USP15-208ENST00000548524 FHOD3Q2V2M9 1422 aa15.58■□□□□ 0.08
USP15-208ENST00000548524 ZCCHC11Q5TAX3 1644 aaKnown RBP15.57■□□□□ 0.08
USP15-208ENST00000548524 EPRSP07814 1512 aaKnown RBP15.56■□□□□ 0.08
USP15-208ENST00000548524 WDR7Q9Y4E6 1490 aa15.55■□□□□ 0.08
USP15-208ENST00000548524 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.55■□□□□ 0.08
USP15-208ENST00000548524 HNRNPUL2Q1KMD3 747 aaKnown RBP15.55■□□□□ 0.08
USP15-208ENST00000548524 KCNH8Q96L42 1107 aa15.55■□□□□ 0.08
USP15-208ENST00000548524 GLI2P10070 1586 aa15.53■□□□□ 0.08
USP15-208ENST00000548524 EFCAB5A4FU69 1503 aa15.53■□□□□ 0.08
USP15-208ENST00000548524 ATP10BO94823 1461 aa15.52■□□□□ 0.07
USP15-208ENST00000548524 RAPGEF6Q8TEU7 1601 aa15.49■□□□□ 0.07
USP15-208ENST00000548524 TSPOAP1O95153 1857 aa15.47■□□□□ 0.07
USP15-208ENST00000548524 CD109Q6YHK3 1445 aa15.46■□□□□ 0.07
USP15-208ENST00000548524 ATP1B4Q9UN42 357 aaPredicted RBP15.46■□□□□ 0.07
USP15-208ENST00000548524 KDM6BO15054 1643 aa15.46■□□□□ 0.06
USP15-208ENST00000548524 NUP153P49790 1475 aaKnown RBP15.46■□□□□ 0.06
USP15-208ENST00000548524 TEX14Q8IWB6 1497 aa15.46■□□□□ 0.06
USP15-208ENST00000548524 ARHGAP35Q9NRY4 1499 aa15.45■□□□□ 0.06
USP15-208ENST00000548524 PLEKHD1A6NEE1 506 aa15.44■□□□□ 0.06
USP15-208ENST00000548524 FMN1Q68DA7 1419 aa15.43■□□□□ 0.06
USP15-208ENST00000548524 MAP3K4Q9Y6R4 1608 aa15.43■□□□□ 0.06
USP15-208ENST00000548524 PPRC1Q5VV67 1664 aaKnown RBP15.4■□□□□ 0.06
USP15-208ENST00000548524 MAGI3Q5TCQ9 1506 aa15.39■□□□□ 0.05
USP15-208ENST00000548524 CFAP43Q8NDM7 1665 aa15.36■□□□□ 0.05
USP15-208ENST00000548524 COL17A1Q9UMD9 1497 aaPredicted RBP15.36■□□□□ 0.05
USP15-208ENST00000548524 CDK11AQ9UQ88 783 aaPredicted RBP15.35■□□□□ 0.05
USP15-208ENST00000548524 CLIP1P30622 1438 aa15.34■□□□□ 0.05
USP15-208ENST00000548524 CDK13Q14004 1512 aaKnown RBP15.34■□□□□ 0.05
USP15-208ENST00000548524 HECW1Q76N89 1606 aa15.32■□□□□ 0.04
USP15-208ENST00000548524 ABCA9Q8IUA7 1624 aa15.31■□□□□ 0.04
USP15-208ENST00000548524 PHLDB1Q86UU1 1377 aa15.3■□□□□ 0.04
USP15-208ENST00000548524 CASKIN1Q8WXD9 1431 aa15.28■□□□□ 0.04
USP15-208ENST00000548524 SLC4A2P04920 1241 aa15.28■□□□□ 0.04
USP15-208ENST00000548524 NEO1Q92859 1461 aa15.27■□□□□ 0.03
USP15-208ENST00000548524 ZBTB22O15209 634 aa15.26■□□□□ 0.03
USP15-208ENST00000548524 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.25■□□□□ 0.03
USP15-208ENST00000548524 ARAP3Q8WWN8 1544 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms