RNA–Protein interactions for RNA: ENST00000548355.5

TMEM106C-208, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-208ENST00000548355 CTTNBP2Q8WZ74 1663 aa12.18□□□□□ -0.46
TMEM106C-208ENST00000548355 SNAPC4Q5SXM2 1469 aa12.16□□□□□ -0.46
TMEM106C-208ENST00000548355 APLP2Q06481 763 aa12.16□□□□□ -0.46
TMEM106C-208ENST00000548355 AEBP2Q6ZN18 517 aaPredicted RBP12.16□□□□□ -0.46
TMEM106C-208ENST00000548355 PPARGC1BQ86YN6 1023 aaKnown RBP12.16□□□□□ -0.46
TMEM106C-208ENST00000548355 MAGI1Q96QZ7 1491 aaPredicted RBP12.14□□□□□ -0.47
TMEM106C-208ENST00000548355 EFCAB5A4FU69 1503 aa12.13□□□□□ -0.47
TMEM106C-208ENST00000548355 SYNJ2O15056 1496 aa12.1□□□□□ -0.47
TMEM106C-208ENST00000548355 GRIN2AQ12879 1464 aa12.09□□□□□ -0.47
TMEM106C-208ENST00000548355 CHMP7Q8WUX9 453 aaPredicted RBP12.09□□□□□ -0.47
TMEM106C-208ENST00000548355 P3H3Q8IVL6 736 aa12.08□□□□□ -0.48
TMEM106C-208ENST00000548355 IQGAP2Q13576 1575 aa12.08□□□□□ -0.48
TMEM106C-208ENST00000548355 TTBK1Q5TCY1 1321 aaPredicted RBP12.08□□□□□ -0.48
TMEM106C-208ENST00000548355 FHOD3Q2V2M9 1422 aa12.07□□□□□ -0.48
TMEM106C-208ENST00000548355 SAMD9Q5K651 1589 aa12.06□□□□□ -0.48
TMEM106C-208ENST00000548355 FBLN2P98095 1184 aa12.05□□□□□ -0.48
TMEM106C-208ENST00000548355 KIAA0586Q9BVV6 1533 aa12.05□□□□□ -0.48
TMEM106C-208ENST00000548355 FMN1Q68DA7 1419 aa12.03□□□□□ -0.48
TMEM106C-208ENST00000548355 UGGT2Q9NYU1 1516 aa12.01□□□□□ -0.49
TMEM106C-208ENST00000548355 PCF11O94913 1555 aaKnown RBP12.01□□□□□ -0.49
TMEM106C-208ENST00000548355 CEP170Q5SW79 1584 aa12.01□□□□□ -0.49
TMEM106C-208ENST00000548355 NUP160Q12769 1436 aa12□□□□□ -0.49
TMEM106C-208ENST00000548355 CASKIN1Q8WXD9 1431 aa12□□□□□ -0.49
TMEM106C-208ENST00000548355 FYCO1Q9BQS8 1478 aa12□□□□□ -0.49
TMEM106C-208ENST00000548355 MAP3K1Q13233 1512 aa12□□□□□ -0.49
TMEM106C-208ENST00000548355 ATP1B4Q9UN42 357 aaPredicted RBP11.99□□□□□ -0.49
TMEM106C-208ENST00000548355 TIAM1Q13009 1591 aa11.97□□□□□ -0.49
TMEM106C-208ENST00000548355 KANK4Q5T7N3 995 aaPredicted RBP11.97□□□□□ -0.49
TMEM106C-208ENST00000548355 KIAA0556O60303 1618 aa11.95□□□□□ -0.5
TMEM106C-208ENST00000548355 CFAP43Q8NDM7 1665 aa11.94□□□□□ -0.5
TMEM106C-208ENST00000548355 DISP1Q96F81 1524 aa11.94□□□□□ -0.5
TMEM106C-208ENST00000548355 CHD1O14646 1710 aa11.93□□□□□ -0.5
TMEM106C-208ENST00000548355 CARMIL2Q6F5E8 1435 aa11.93□□□□□ -0.5
TMEM106C-208ENST00000548355 LRRC9Q6ZRR7 1453 aa11.92□□□□□ -0.5
TMEM106C-208ENST00000548355 JPH4Q96JJ6 628 aa11.92□□□□□ -0.5
TMEM106C-208ENST00000548355 HECW1Q76N89 1606 aa11.89□□□□□ -0.51
TMEM106C-208ENST00000548355 CCDC18Q5T9S5 1454 aa11.89□□□□□ -0.51
TMEM106C-208ENST00000548355 HRCP23327 699 aa11.86□□□□□ -0.51
TMEM106C-208ENST00000548355 MTUS2Q5JR59 1369 aa11.85□□□□□ -0.51
TMEM106C-208ENST00000548355 PRG4Q92954 1404 aaPredicted RBP11.85□□□□□ -0.51
TMEM106C-208ENST00000548355 RRBP1Q9P2E9 1410 aaKnown RBP11.85□□□□□ -0.51
TMEM106C-208ENST00000548355 LRRIQ1Q96JM4 1722 aa11.84□□□□□ -0.51
TMEM106C-208ENST00000548355 RAPGEF6Q8TEU7 1601 aa11.84□□□□□ -0.51
TMEM106C-208ENST00000548355 EPRSP07814 1512 aaKnown RBP11.84□□□□□ -0.51
TMEM106C-208ENST00000548355 CCNB3Q8WWL7 1395 aa11.82□□□□□ -0.52
TMEM106C-208ENST00000548355 EHBP1L1Q8N3D4 1523 aa11.82□□□□□ -0.52
TMEM106C-208ENST00000548355 HNRNPUL2Q1KMD3 747 aaKnown RBP11.82□□□□□ -0.52
TMEM106C-208ENST00000548355 SHROOM2Q13796 1616 aa11.82□□□□□ -0.52
TMEM106C-208ENST00000548355 PHLDB1Q86UU1 1377 aa11.81□□□□□ -0.52
TMEM106C-208ENST00000548355 NUP153P49790 1475 aaKnown RBP11.81□□□□□ -0.52
TMEM106C-208ENST00000548355 CLASP1Q7Z460 1538 aa11.81□□□□□ -0.52
TMEM106C-208ENST00000548355 CDK13Q14004 1512 aaKnown RBP11.8□□□□□ -0.52
TMEM106C-208ENST00000548355 PLB1Q6P1J6 1458 aa11.79□□□□□ -0.52
TMEM106C-208ENST00000548355 ARID3CA6NKF2 412 aa11.79□□□□□ -0.52
TMEM106C-208ENST00000548355 PTPRGP23470 1445 aa11.78□□□□□ -0.52
TMEM106C-208ENST00000548355 SUPT6HQ7KZ85 1726 aaKnown RBP11.78□□□□□ -0.52
TMEM106C-208ENST00000548355 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.78□□□□□ -0.52
TMEM106C-208ENST00000548355 CDK11AQ9UQ88 783 aaPredicted RBP11.78□□□□□ -0.52
TMEM106C-208ENST00000548355 MAGI3Q5TCQ9 1506 aa11.77□□□□□ -0.52
TMEM106C-208ENST00000548355 ABCA8O94911 1581 aa11.77□□□□□ -0.53
TMEM106C-208ENST00000548355 NCOA2Q15596 1464 aa11.76□□□□□ -0.53
TMEM106C-208ENST00000548355 ZEB1P37275 1124 aaPredicted RBP11.76□□□□□ -0.53
TMEM106C-208ENST00000548355 FAM50AQ14320 339 aaKnown RBP11.75□□□□□ -0.53
TMEM106C-208ENST00000548355 CCER1Q8TC90 406 aaPredicted RBP11.74□□□□□ -0.53
TMEM106C-208ENST00000548355 MYOM3Q5VTT5 1437 aa11.74□□□□□ -0.53
TMEM106C-208ENST00000548355 ARHGEF11O15085 1522 aa11.73□□□□□ -0.53
TMEM106C-208ENST00000548355 FGD6Q6ZV73 1430 aa11.73□□□□□ -0.53
TMEM106C-208ENST00000548355 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.73□□□□□ -0.53
TMEM106C-208ENST00000548355 ERCC6L2Q5T890 1561 aa11.72□□□□□ -0.53
TMEM106C-208ENST00000548355 UACAQ9BZF9 1416 aa11.72□□□□□ -0.53
TMEM106C-208ENST00000548355 ITGAEP38570 1179 aa11.72□□□□□ -0.53
TMEM106C-208ENST00000548355 TROQ12816 1431 aaPredicted RBP11.71□□□□□ -0.53
TMEM106C-208ENST00000548355 OSCARQ8IYS5 282 aa11.71□□□□□ -0.53
TMEM106C-208ENST00000548355 ATP10BO94823 1461 aa11.7□□□□□ -0.54
TMEM106C-208ENST00000548355 PLEKHD1A6NEE1 506 aa11.69□□□□□ -0.54
TMEM106C-208ENST00000548355 ABCC2Q92887 1545 aa11.67□□□□□ -0.54
TMEM106C-208ENST00000548355 MIA2Q96PC5 1412 aa11.67□□□□□ -0.54
TMEM106C-208ENST00000548355 PTPN23Q9H3S7 1636 aa11.67□□□□□ -0.54
TMEM106C-208ENST00000548355 TCOF1Q13428 1488 aaKnown RBP11.65□□□□□ -0.54
TMEM106C-208ENST00000548355 ADCY10Q96PN6 1610 aa11.65□□□□□ -0.54
TMEM106C-208ENST00000548355 UHRF1BP1LA0JNW5 1464 aa11.64□□□□□ -0.55
TMEM106C-208ENST00000548355 KIF14Q15058 1648 aa11.64□□□□□ -0.55
TMEM106C-208ENST00000548355 SETD5Q9C0A6 1442 aa11.62□□□□□ -0.55
TMEM106C-208ENST00000548355 ITSN2Q9NZM3 1697 aa11.61□□□□□ -0.55
TMEM106C-208ENST00000548355 RAB3GAP2Q9H2M9 1393 aa11.6□□□□□ -0.55
TMEM106C-208ENST00000548355 CFDP1Q9UEE9 299 aaPredicted RBP11.6□□□□□ -0.55
TMEM106C-208ENST00000548355 GPATCH8Q9UKJ3 1502 aaKnown RBP11.6□□□□□ -0.55
TMEM106C-208ENST00000548355 KDM5BQ9UGL1 1544 aa11.59□□□□□ -0.55
TMEM106C-208ENST00000548355 ABCC10Q5T3U5 1492 aa11.58□□□□□ -0.56
TMEM106C-208ENST00000548355 ZCCHC11Q5TAX3 1644 aaKnown RBP11.58□□□□□ -0.56
TMEM106C-208ENST00000548355 PTPRKQ15262 1439 aa11.58□□□□□ -0.56
TMEM106C-208ENST00000548355 DHX57Q6P158 1386 aaKnown RBP11.56□□□□□ -0.56
TMEM106C-208ENST00000548355 HFM1A2PYH4 1435 aa11.56□□□□□ -0.56
TMEM106C-208ENST00000548355 CAMSAP2Q08AD1 1489 aa11.56□□□□□ -0.56
TMEM106C-208ENST00000548355 ZNF777Q9ULD5 760 aaPredicted RBP11.55□□□□□ -0.56
TMEM106C-208ENST00000548355 ZNF644Q9H582 1327 aaPredicted RBP11.55□□□□□ -0.56
TMEM106C-208ENST00000548355 CLSPNQ9HAW4 1339 aa11.55□□□□□ -0.56
TMEM106C-208ENST00000548355 DAPK1P53355 1430 aa11.54□□□□□ -0.56
TMEM106C-208ENST00000548355 CDC42BPAQ5VT25 1732 aa11.54□□□□□ -0.56
TMEM106C-208ENST00000548355 DNMT1P26358 1616 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms