RNA–Protein interactions for RNA: ENST00000548120.1

RNF41-204, Transcript of ring finger protein 41, humanhuman

TSL 2

Gene RNF41, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-204ENST00000548120 KDM6BO15054 1643 aa12.39□□□□□ -0.43
RNF41-204ENST00000548120 ABCC10Q5T3U5 1492 aa12.37□□□□□ -0.43
RNF41-204ENST00000548120 PBRM1Q86U86 1689 aa12.37□□□□□ -0.43
RNF41-204ENST00000548120 GRIN2AQ12879 1464 aa12.35□□□□□ -0.43
RNF41-204ENST00000548120 CUX1P39880 1505 aa12.34□□□□□ -0.43
RNF41-204ENST00000548120 HECW2Q9P2P5 1572 aa12.34□□□□□ -0.43
RNF41-204ENST00000548120 DIP2BQ9P265 1576 aa12.32□□□□□ -0.44
RNF41-204ENST00000548120 NUP160Q12769 1436 aa12.32□□□□□ -0.44
RNF41-204ENST00000548120 ADGRL1O94910 1474 aa12.32□□□□□ -0.44
RNF41-204ENST00000548120 CACNB1Q02641 598 aaPredicted RBP12.3□□□□□ -0.44
RNF41-204ENST00000548120 SHROOM2Q13796 1616 aa12.29□□□□□ -0.44
RNF41-204ENST00000548120 ABCA5Q8WWZ7 1642 aa12.29□□□□□ -0.44
RNF41-204ENST00000548120 MAPKBP1O60336 1514 aa12.28□□□□□ -0.44
RNF41-204ENST00000548120 NPM1P06748 294 aaKnown RBP eCLIP12.28□□□□□ -0.44
RNF41-204ENST00000548120 PRG4Q92954 1404 aaPredicted RBP12.28□□□□□ -0.44
RNF41-204ENST00000548120 ADAMTS12P58397 1594 aa12.27□□□□□ -0.44
RNF41-204ENST00000548120 FBXO41Q8TF61 875 aa12.26□□□□□ -0.45
RNF41-204ENST00000548120 ABCA10Q8WWZ4 1543 aa12.26□□□□□ -0.45
RNF41-204ENST00000548120 DCAF8L1A6NGE4 600 aa12.22□□□□□ -0.45
RNF41-204ENST00000548120 FHAD1B1AJZ9 1412 aa12.2□□□□□ -0.46
RNF41-204ENST00000548120 ADCY10Q96PN6 1610 aa12.19□□□□□ -0.46
RNF41-204ENST00000548120 TSPOAP1O95153 1857 aa12.19□□□□□ -0.46
RNF41-204ENST00000548120 LMTK3Q96Q04 1460 aa12.17□□□□□ -0.46
RNF41-204ENST00000548120 JPH4Q96JJ6 628 aa12.17□□□□□ -0.46
RNF41-204ENST00000548120 PPP4R3CPQ6ZMV5 832 aa12.14□□□□□ -0.47
RNF41-204ENST00000548120 RUSC2Q8N2Y8 1516 aa12.11□□□□□ -0.47
RNF41-204ENST00000548120 WRNQ14191 1432 aaPredicted RBP eCLIP12.11□□□□□ -0.47
RNF41-204ENST00000548120 COL17A1Q9UMD9 1497 aaPredicted RBP12.08□□□□□ -0.47
RNF41-204ENST00000548120 ERICH3Q5RHP9 1530 aa12.08□□□□□ -0.48
RNF41-204ENST00000548120 HOXD11P31277 338 aaPredicted RBP12.07□□□□□ -0.48
RNF41-204ENST00000548120 PPRC1Q5VV67 1664 aaKnown RBP12.06□□□□□ -0.48
RNF41-204ENST00000548120 TTBK1Q5TCY1 1321 aaPredicted RBP12.06□□□□□ -0.48
RNF41-204ENST00000548120 ASXL2Q76L83 1435 aa12.04□□□□□ -0.48
RNF41-204ENST00000548120 TOP2BQ02880 1626 aa12.03□□□□□ -0.48
RNF41-204ENST00000548120 GLI2P10070 1586 aa12.02□□□□□ -0.49
RNF41-204ENST00000548120 SOCS7O14512 581 aa12.02□□□□□ -0.49
RNF41-204ENST00000548120 ILDR2Q71H61 639 aa12.02□□□□□ -0.49
RNF41-204ENST00000548120 PLB1Q6P1J6 1458 aa12.02□□□□□ -0.49
RNF41-204ENST00000548120 ABCC2Q92887 1545 aa12.01□□□□□ -0.49
RNF41-204ENST00000548120 DISP3Q9P2K9 1392 aa12□□□□□ -0.49
RNF41-204ENST00000548120 CNKSR2Q8WXI2 1034 aa11.99□□□□□ -0.49
RNF41-204ENST00000548120 RNF39Q9H2S5 420 aa11.99□□□□□ -0.49
RNF41-204ENST00000548120 PTPRGP23470 1445 aa11.99□□□□□ -0.49
RNF41-204ENST00000548120 TEX14Q8IWB6 1497 aa11.99□□□□□ -0.49
RNF41-204ENST00000548120 KIAA0586Q9BVV6 1533 aa11.96□□□□□ -0.49
RNF41-204ENST00000548120 EPRSP07814 1512 aaKnown RBP11.96□□□□□ -0.5
RNF41-204ENST00000548120 MAP3K4Q9Y6R4 1608 aa11.94□□□□□ -0.5
RNF41-204ENST00000548120 BIVM-ERCC5R4GMW8 1640 aa11.94□□□□□ -0.5
RNF41-204ENST00000548120 RNF216Q9NWF9 866 aaPredicted RBP11.93□□□□□ -0.5
RNF41-204ENST00000548120 CUL7Q14999 1698 aa11.92□□□□□ -0.5
RNF41-204ENST00000548120 TNIKQ9UKE5 1360 aa11.92□□□□□ -0.5
RNF41-204ENST00000548120 KIF21BO75037 1637 aa11.9□□□□□ -0.5
RNF41-204ENST00000548120 PTPRMP28827 1452 aa11.89□□□□□ -0.51
RNF41-204ENST00000548120 UHRF1BP1LA0JNW5 1464 aa11.89□□□□□ -0.51
RNF41-204ENST00000548120 PCF11O94913 1555 aaKnown RBP11.88□□□□□ -0.51
RNF41-204ENST00000548120 CARMIL2Q6F5E8 1435 aa11.88□□□□□ -0.51
RNF41-204ENST00000548120 UACAQ9BZF9 1416 aa11.87□□□□□ -0.51
RNF41-204ENST00000548120 KDM5BQ9UGL1 1544 aa11.85□□□□□ -0.51
RNF41-204ENST00000548120 CERKQ8TCT0 537 aa11.84□□□□□ -0.51
RNF41-204ENST00000548120 SPATA31D1Q6ZQQ2 1576 aa11.84□□□□□ -0.51
RNF41-204ENST00000548120 C1QBPQ07021 282 aaKnown RBP11.83□□□□□ -0.52
RNF41-204ENST00000548120 WDR7Q9Y4E6 1490 aa11.83□□□□□ -0.52
RNF41-204ENST00000548120 ZCCHC11Q5TAX3 1644 aaKnown RBP11.82□□□□□ -0.52
RNF41-204ENST00000548120 CD109Q6YHK3 1445 aa11.81□□□□□ -0.52
RNF41-204ENST00000548120 HSPA2P54652 639 aa11.81□□□□□ -0.52
RNF41-204ENST00000548120 MAGI3Q5TCQ9 1506 aa11.81□□□□□ -0.52
RNF41-204ENST00000548120 ADAMTSL3P82987 1691 aa11.79□□□□□ -0.52
RNF41-204ENST00000548120 IGF1RP08069 1367 aa11.79□□□□□ -0.52
RNF41-204ENST00000548120 DISP1Q96F81 1524 aa11.77□□□□□ -0.52
RNF41-204ENST00000548120 IQGAP2Q13576 1575 aa11.77□□□□□ -0.53
RNF41-204ENST00000548120 MADDQ8WXG6 1647 aa11.77□□□□□ -0.53
RNF41-204ENST00000548120 KCNH8Q96L42 1107 aa11.76□□□□□ -0.53
RNF41-204ENST00000548120 ARID4BQ4LE39 1312 aaPredicted RBP11.75□□□□□ -0.53
RNF41-204ENST00000548120 KIF27Q86VH2 1401 aa11.74□□□□□ -0.53
RNF41-204ENST00000548120 CFAP43Q8NDM7 1665 aa11.74□□□□□ -0.53
RNF41-204ENST00000548120 ARAP3Q8WWN8 1544 aa11.71□□□□□ -0.53
RNF41-204ENST00000548120 CARMIL1Q5VZK9 1371 aa11.71□□□□□ -0.53
RNF41-204ENST00000548120 BCORL1Q5H9F3 1711 aa11.71□□□□□ -0.54
RNF41-204ENST00000548120 RIMS1Q86UR5 1692 aaKnown RBP11.69□□□□□ -0.54
RNF41-204ENST00000548120 KIAA0556O60303 1618 aa11.68□□□□□ -0.54
RNF41-204ENST00000548120 RAPGEF3O95398 923 aa11.68□□□□□ -0.54
RNF41-204ENST00000548120 SUPT5HO00267 1087 aaKnown RBP11.66□□□□□ -0.54
RNF41-204ENST00000548120 UGGT2Q9NYU1 1516 aa11.65□□□□□ -0.54
RNF41-204ENST00000548120 NCBP3Q53F19 620 aaKnown RBP11.65□□□□□ -0.54
RNF41-204ENST00000548120 ARID3CA6NKF2 412 aa11.62□□□□□ -0.55
RNF41-204ENST00000548120 FRMPD1Q5SYB0 1578 aa11.62□□□□□ -0.55
RNF41-204ENST00000548120 ARHGEF40Q8TER5 1519 aa11.61□□□□□ -0.55
RNF41-204ENST00000548120 PHLDB1Q86UU1 1377 aa11.6□□□□□ -0.55
RNF41-204ENST00000548120 ABCA8O94911 1581 aa11.59□□□□□ -0.55
RNF41-204ENST00000548120 YEATS2Q9ULM3 1422 aa11.58□□□□□ -0.56
RNF41-204ENST00000548120 NEO1Q92859 1461 aa11.57□□□□□ -0.56
RNF41-204ENST00000548120 MLECQ14165 292 aa11.57□□□□□ -0.56
RNF41-204ENST00000548120 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.57□□□□□ -0.56
RNF41-204ENST00000548120 POGZQ7Z3K3 1410 aa11.57□□□□□ -0.56
RNF41-204ENST00000548120 FANCAO15360 1455 aa11.57□□□□□ -0.56
RNF41-204ENST00000548120 ABCA9Q8IUA7 1624 aa11.55□□□□□ -0.56
RNF41-204ENST00000548120 RAPGEF2Q9Y4G8 1499 aa11.54□□□□□ -0.56
RNF41-204ENST00000548120 AKNAQ7Z591 1439 aa11.53□□□□□ -0.56
RNF41-204ENST00000548120 TTC37Q6PGP7 1564 aa11.53□□□□□ -0.56
RNF41-204ENST00000548120 GOLGA3Q08378 1498 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms