RNA–Protein interactions for RNA: ENST00000547939.5

TUBA1A-204, Transcript of tubulin alpha 1a, humanhuman

TSL 3

Gene TUBA1A, Length 946 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-204ENST00000547939 TOP2BQ02880 1626 aa18.24■□□□□ 0.51
TUBA1A-204ENST00000547939 MAPKBP1O60336 1514 aa18.23■□□□□ 0.51
TUBA1A-204ENST00000547939 HECW2Q9P2P5 1572 aa18.21■□□□□ 0.51
TUBA1A-204ENST00000547939 FAM69CQ0P6D2 419 aa18.2■□□□□ 0.5
TUBA1A-204ENST00000547939 BIVM-ERCC5R4GMW8 1640 aa18.2■□□□□ 0.5
TUBA1A-204ENST00000547939 ADCY10Q96PN6 1610 aa18.19■□□□□ 0.5
TUBA1A-204ENST00000547939 ADGRL1O94910 1474 aa18.14■□□□□ 0.49
TUBA1A-204ENST00000547939 PPRC1Q5VV67 1664 aaKnown RBP18.13■□□□□ 0.49
TUBA1A-204ENST00000547939 PRG4Q92954 1404 aaPredicted RBP18.12■□□□□ 0.49
TUBA1A-204ENST00000547939 FHAD1B1AJZ9 1412 aa18.11■□□□□ 0.49
TUBA1A-204ENST00000547939 ERICH3Q5RHP9 1530 aa18.08■□□□□ 0.48
TUBA1A-204ENST00000547939 RUSC2Q8N2Y8 1516 aa18.06■□□□□ 0.48
TUBA1A-204ENST00000547939 KIF27Q86VH2 1401 aa18.01■□□□□ 0.47
TUBA1A-204ENST00000547939 JPH4Q96JJ6 628 aa17.98■□□□□ 0.47
TUBA1A-204ENST00000547939 COL17A1Q9UMD9 1497 aaPredicted RBP17.96■□□□□ 0.47
TUBA1A-204ENST00000547939 IGF1RP08069 1367 aa17.96■□□□□ 0.47
TUBA1A-204ENST00000547939 FBXO41Q8TF61 875 aa17.92■□□□□ 0.46
TUBA1A-204ENST00000547939 NPM1P06748 294 aaKnown RBP eCLIP17.91■□□□□ 0.46
TUBA1A-204ENST00000547939 GLI2P10070 1586 aa17.9■□□□□ 0.46
TUBA1A-204ENST00000547939 CARMIL1Q5VZK9 1371 aa17.87■□□□□ 0.45
TUBA1A-204ENST00000547939 CUL7Q14999 1698 aa17.84■□□□□ 0.45
TUBA1A-204ENST00000547939 MAP3K4Q9Y6R4 1608 aa17.84■□□□□ 0.45
TUBA1A-204ENST00000547939 KIAA0586Q9BVV6 1533 aa17.81■□□□□ 0.44
TUBA1A-204ENST00000547939 ASXL2Q76L83 1435 aa17.79■□□□□ 0.44
TUBA1A-204ENST00000547939 ABCC2Q92887 1545 aa17.78■□□□□ 0.44
TUBA1A-204ENST00000547939 PLB1Q6P1J6 1458 aa17.74■□□□□ 0.43
TUBA1A-204ENST00000547939 LMTK3Q96Q04 1460 aa17.73■□□□□ 0.43
TUBA1A-204ENST00000547939 EPRSP07814 1512 aaKnown RBP17.71■□□□□ 0.43
TUBA1A-204ENST00000547939 KIF21BO75037 1637 aa17.7■□□□□ 0.42
TUBA1A-204ENST00000547939 RAPGEF2Q9Y4G8 1499 aa17.69■□□□□ 0.42
TUBA1A-204ENST00000547939 PTPRGP23470 1445 aa17.68■□□□□ 0.42
TUBA1A-204ENST00000547939 CARMIL2Q6F5E8 1435 aa17.68■□□□□ 0.42
TUBA1A-204ENST00000547939 UHRF1BP1LA0JNW5 1464 aa17.66■□□□□ 0.42
TUBA1A-204ENST00000547939 TTBK1Q5TCY1 1321 aaPredicted RBP17.65■□□□□ 0.42
TUBA1A-204ENST00000547939 ZCCHC11Q5TAX3 1644 aaKnown RBP17.65■□□□□ 0.42
TUBA1A-204ENST00000547939 TEX14Q8IWB6 1497 aa17.64■□□□□ 0.41
TUBA1A-204ENST00000547939 ILDR2Q71H61 639 aa17.63■□□□□ 0.41
TUBA1A-204ENST00000547939 TNIKQ9UKE5 1360 aa17.63■□□□□ 0.41
TUBA1A-204ENST00000547939 KDM5BQ9UGL1 1544 aa17.62■□□□□ 0.41
TUBA1A-204ENST00000547939 ADAMTSL3P82987 1691 aa17.61■□□□□ 0.41
TUBA1A-204ENST00000547939 IQGAP2Q13576 1575 aa17.61■□□□□ 0.41
TUBA1A-204ENST00000547939 CSRNP3Q8WYN3 585 aa17.57■□□□□ 0.4
TUBA1A-204ENST00000547939 UACAQ9BZF9 1416 aa17.55■□□□□ 0.4
TUBA1A-204ENST00000547939 SOCS7O14512 581 aa17.55■□□□□ 0.4
TUBA1A-204ENST00000547939 PTPRMP28827 1452 aa17.55■□□□□ 0.4
TUBA1A-204ENST00000547939 PCF11O94913 1555 aaKnown RBP17.54■□□□□ 0.4
TUBA1A-204ENST00000547939 PRXQ9BXM0 1461 aa17.54■□□□□ 0.4
TUBA1A-204ENST00000547939 CFAP43Q8NDM7 1665 aa17.54■□□□□ 0.4
TUBA1A-204ENST00000547939 DISP1Q96F81 1524 aa17.53■□□□□ 0.4
TUBA1A-204ENST00000547939 FAM9AQ8IZU1 332 aaPredicted RBP17.52■□□□□ 0.4
TUBA1A-204ENST00000547939 UGGT2Q9NYU1 1516 aa17.52■□□□□ 0.39
TUBA1A-204ENST00000547939 MAGI3Q5TCQ9 1506 aa17.51■□□□□ 0.39
TUBA1A-204ENST00000547939 EEA1Q15075 1411 aa17.49■□□□□ 0.39
TUBA1A-204ENST00000547939 WDR7Q9Y4E6 1490 aa17.48■□□□□ 0.39
TUBA1A-204ENST00000547939 BCORL1Q5H9F3 1711 aa17.47■□□□□ 0.39
TUBA1A-204ENST00000547939 GOLGA3Q08378 1498 aa17.47■□□□□ 0.39
TUBA1A-204ENST00000547939 MADDQ8WXG6 1647 aa17.47■□□□□ 0.39
TUBA1A-204ENST00000547939 DISP3Q9P2K9 1392 aa17.42■□□□□ 0.38
TUBA1A-204ENST00000547939 KIAA0556O60303 1618 aa17.42■□□□□ 0.38
TUBA1A-204ENST00000547939 CD109Q6YHK3 1445 aa17.41■□□□□ 0.38
TUBA1A-204ENST00000547939 CHIC1Q5VXU3 224 aa17.4■□□□□ 0.38
TUBA1A-204ENST00000547939 ARAP3Q8WWN8 1544 aa17.4■□□□□ 0.38
TUBA1A-204ENST00000547939 RIMS1Q86UR5 1692 aaKnown RBP17.39■□□□□ 0.37
TUBA1A-204ENST00000547939 SPATA31D1Q6ZQQ2 1576 aa17.37■□□□□ 0.37
TUBA1A-204ENST00000547939 CTTNBP2Q8WZ74 1663 aa17.37■□□□□ 0.37
TUBA1A-204ENST00000547939 P3H3Q8IVL6 736 aa17.37■□□□□ 0.37
TUBA1A-204ENST00000547939 CERKQ8TCT0 537 aa17.35■□□□□ 0.37
TUBA1A-204ENST00000547939 FRMPD1Q5SYB0 1578 aa17.35■□□□□ 0.37
TUBA1A-204ENST00000547939 RANGAP1P46060 587 aaPredicted RBP17.33■□□□□ 0.36
TUBA1A-204ENST00000547939 SIGLEC1Q9BZZ2 1709 aa17.32■□□□□ 0.36
TUBA1A-204ENST00000547939 HSPA2P54652 639 aa17.31■□□□□ 0.36
TUBA1A-204ENST00000547939 ABCA8O94911 1581 aa17.31■□□□□ 0.36
TUBA1A-204ENST00000547939 UBTFP17480 764 aaKnown RBP17.27■□□□□ 0.36
TUBA1A-204ENST00000547939 KCNH8Q96L42 1107 aa17.26■□□□□ 0.35
TUBA1A-204ENST00000547939 STRCQ7RTU9 1775 aa17.25■□□□□ 0.35
TUBA1A-204ENST00000547939 ABCA9Q8IUA7 1624 aa17.25■□□□□ 0.35
TUBA1A-204ENST00000547939 EHMT2Q96KQ7 1210 aa17.25■□□□□ 0.35
TUBA1A-204ENST00000547939 ARID3CA6NKF2 412 aa17.24■□□□□ 0.35
TUBA1A-204ENST00000547939 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.23■□□□□ 0.35
TUBA1A-204ENST00000547939 HNRNPUL2Q1KMD3 747 aaKnown RBP17.23■□□□□ 0.35
TUBA1A-204ENST00000547939 ARHGEF40Q8TER5 1519 aa17.22■□□□□ 0.35
TUBA1A-204ENST00000547939 RICTORQ6R327 1708 aa17.21■□□□□ 0.35
TUBA1A-204ENST00000547939 RAPGEF3O95398 923 aa17.2■□□□□ 0.34
TUBA1A-204ENST00000547939 SAMD9Q5K651 1589 aa17.19■□□□□ 0.34
TUBA1A-204ENST00000547939 ATP10BO94823 1461 aa17.18■□□□□ 0.34
TUBA1A-204ENST00000547939 FER1L4A9Z1Z3 1794 aa17.17■□□□□ 0.34
TUBA1A-204ENST00000547939 FHOD3Q2V2M9 1422 aa17.17■□□□□ 0.34
TUBA1A-204ENST00000547939 PREX1Q8TCU6 1659 aa17.14■□□□□ 0.33
TUBA1A-204ENST00000547939 EFCAB5A4FU69 1503 aa17.14■□□□□ 0.33
TUBA1A-204ENST00000547939 TTC37Q6PGP7 1564 aa17.14■□□□□ 0.33
TUBA1A-204ENST00000547939 NEO1Q92859 1461 aa17.13■□□□□ 0.33
TUBA1A-204ENST00000547939 PLEKHD1A6NEE1 506 aa17.13■□□□□ 0.33
TUBA1A-204ENST00000547939 PHLDB1Q86UU1 1377 aa17.13■□□□□ 0.33
TUBA1A-204ENST00000547939 RAPGEF6Q8TEU7 1601 aa17.1■□□□□ 0.33
TUBA1A-204ENST00000547939 ARID4BQ4LE39 1312 aaPredicted RBP17.1■□□□□ 0.33
TUBA1A-204ENST00000547939 NUP153P49790 1475 aaKnown RBP17.08■□□□□ 0.32
TUBA1A-204ENST00000547939 ATP1B4Q9UN42 357 aaPredicted RBP17.08■□□□□ 0.32
TUBA1A-204ENST00000547939 LTBP4Q8N2S1 1624 aa17.07■□□□□ 0.32
TUBA1A-204ENST00000547939 SETD1BQ9UPS6 1966 aaKnown RBP17.06■□□□□ 0.32
TUBA1A-204ENST00000547939 FMN1Q68DA7 1419 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms