RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 JPH4Q96JJ6 628 aa31.55■■■□□ 2.64
PRPF40B-206ENST00000547764 ERCC6L2Q5T890 1561 aa31.53■■■□□ 2.64
PRPF40B-206ENST00000547764 KIAA0586Q9BVV6 1533 aa31.53■■■□□ 2.64
PRPF40B-206ENST00000547764 RAPGEF2Q9Y4G8 1499 aa31.52■■■□□ 2.64
PRPF40B-206ENST00000547764 PRG4Q92954 1404 aaPredicted RBP31.48■■■□□ 2.63
PRPF40B-206ENST00000547764 PRXQ9BXM0 1461 aa31.4■■■□□ 2.62
PRPF40B-206ENST00000547764 CSRNP3Q8WYN3 585 aa31.39■■■□□ 2.62
PRPF40B-206ENST00000547764 EEA1Q15075 1411 aa31.36■■■□□ 2.61
PRPF40B-206ENST00000547764 IQGAP2Q13576 1575 aa31.32■■■□□ 2.6
PRPF40B-206ENST00000547764 FAM9AQ8IZU1 332 aaPredicted RBP31.3■■■□□ 2.6
PRPF40B-206ENST00000547764 CARMIL2Q6F5E8 1435 aa31.18■■■□□ 2.58
PRPF40B-206ENST00000547764 CTTNBP2Q8WZ74 1663 aa31.18■■■□□ 2.58
PRPF40B-206ENST00000547764 UGGT2Q9NYU1 1516 aa31.16■■■□□ 2.58
PRPF40B-206ENST00000547764 DISP1Q96F81 1524 aa31.13■■■□□ 2.57
PRPF40B-206ENST00000547764 TNIKQ9UKE5 1360 aa31.1■■■□□ 2.57
PRPF40B-206ENST00000547764 PTPRGP23470 1445 aa31.09■■■□□ 2.57
PRPF40B-206ENST00000547764 TTBK1Q5TCY1 1321 aaPredicted RBP31.07■■■□□ 2.56
PRPF40B-206ENST00000547764 TRHP20396 242 aaPredicted RBP31.04■■■□□ 2.56
PRPF40B-206ENST00000547764 KIF21BO75037 1637 aa31.04■■■□□ 2.56
PRPF40B-206ENST00000547764 KIAA0556O60303 1618 aa31.02■■■□□ 2.56
PRPF40B-206ENST00000547764 ADCY10Q96PN6 1610 aa30.98■■■□□ 2.55
PRPF40B-206ENST00000547764 GOLGA3Q08378 1498 aa30.98■■■□□ 2.55
PRPF40B-206ENST00000547764 NPM1P06748 294 aaKnown RBP eCLIP30.92■■■□□ 2.54
PRPF40B-206ENST00000547764 EHMT2Q96KQ7 1210 aa30.91■■■□□ 2.54
PRPF40B-206ENST00000547764 UACAQ9BZF9 1416 aa30.88■■■□□ 2.53
PRPF40B-206ENST00000547764 UHRF1BP1LA0JNW5 1464 aa30.84■■■□□ 2.53
PRPF40B-206ENST00000547764 UBTFP17480 764 aaKnown RBP30.84■■■□□ 2.53
PRPF40B-206ENST00000547764 P3H3Q8IVL6 736 aa30.84■■■□□ 2.53
PRPF40B-206ENST00000547764 RANGAP1P46060 587 aaPredicted RBP30.83■■■□□ 2.53
PRPF40B-206ENST00000547764 SAMD9Q5K651 1589 aa30.8■■■□□ 2.52
PRPF40B-206ENST00000547764 ABCC2Q92887 1545 aa30.8■■■□□ 2.52
PRPF40B-206ENST00000547764 MAPKBP1O60336 1514 aa30.78■■■□□ 2.52
PRPF40B-206ENST00000547764 PLB1Q6P1J6 1458 aa30.76■■■□□ 2.51
PRPF40B-206ENST00000547764 ABCA8O94911 1581 aa30.7■■■□□ 2.5
PRPF40B-206ENST00000547764 KDM5BQ9UGL1 1544 aa30.69■■■□□ 2.5
PRPF40B-206ENST00000547764 ABCC10Q5T3U5 1492 aa30.67■■■□□ 2.5
PRPF40B-206ENST00000547764 FHOD3Q2V2M9 1422 aa30.65■■■□□ 2.5
PRPF40B-206ENST00000547764 EFCAB5A4FU69 1503 aa30.65■■■□□ 2.5
PRPF40B-206ENST00000547764 KIF13AQ9H1H9 1805 aa30.64■■■□□ 2.5
PRPF40B-206ENST00000547764 FAM69CQ0P6D2 419 aa30.64■■■□□ 2.5
PRPF40B-206ENST00000547764 ASXL2Q76L83 1435 aa30.63■■■□□ 2.49
PRPF40B-206ENST00000547764 ZCCHC11Q5TAX3 1644 aaKnown RBP30.62■■■□□ 2.49
PRPF40B-206ENST00000547764 DIP2BQ9P265 1576 aa30.6■■■□□ 2.49
PRPF40B-206ENST00000547764 ARHGAP35Q9NRY4 1499 aa30.52■■■□□ 2.48
PRPF40B-206ENST00000547764 RAPGEF6Q8TEU7 1601 aa30.51■■■□□ 2.48
PRPF40B-206ENST00000547764 ARID3CA6NKF2 412 aa30.51■■■□□ 2.47
PRPF40B-206ENST00000547764 ATP10BO94823 1461 aa30.47■■■□□ 2.47
PRPF40B-206ENST00000547764 WDR7Q9Y4E6 1490 aa30.44■■■□□ 2.46
PRPF40B-206ENST00000547764 EPRSP07814 1512 aaKnown RBP30.44■■■□□ 2.46
PRPF40B-206ENST00000547764 NUP153P49790 1475 aaKnown RBP30.43■■■□□ 2.46
PRPF40B-206ENST00000547764 GLI2P10070 1586 aa30.42■■■□□ 2.46
PRPF40B-206ENST00000547764 FMN1Q68DA7 1419 aa30.39■■■□□ 2.45
PRPF40B-206ENST00000547764 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.36■■■□□ 2.45
PRPF40B-206ENST00000547764 HNRNPUL2Q1KMD3 747 aaKnown RBP30.36■■■□□ 2.45
PRPF40B-206ENST00000547764 KCNH8Q96L42 1107 aa30.36■■■□□ 2.45
PRPF40B-206ENST00000547764 TSPOAP1O95153 1857 aa30.35■■■□□ 2.45
PRPF40B-206ENST00000547764 CLIP1P30622 1438 aa30.32■■■□□ 2.44
PRPF40B-206ENST00000547764 LOC105371045A0A1W2PR82 267 aa30.28■■■□□ 2.44
PRPF40B-206ENST00000547764 MAP3K4Q9Y6R4 1608 aa30.28■■■□□ 2.44
PRPF40B-206ENST00000547764 ATP1B4Q9UN42 357 aaPredicted RBP30.27■■■□□ 2.44
PRPF40B-206ENST00000547764 PPRC1Q5VV67 1664 aaKnown RBP30.24■■■□□ 2.43
PRPF40B-206ENST00000547764 HECW1Q76N89 1606 aa30.22■■■□□ 2.43
PRPF40B-206ENST00000547764 PLEKHD1A6NEE1 506 aa30.22■■■□□ 2.43
PRPF40B-206ENST00000547764 CDK13Q14004 1512 aaKnown RBP30.21■■■□□ 2.43
PRPF40B-206ENST00000547764 CD109Q6YHK3 1445 aa30.2■■■□□ 2.42
PRPF40B-206ENST00000547764 CEP162Q5TB80 1403 aa30.18■■■□□ 2.42
PRPF40B-206ENST00000547764 CFAP43Q8NDM7 1665 aa30.17■■■□□ 2.42
PRPF40B-206ENST00000547764 CASKIN1Q8WXD9 1431 aa30.15■■■□□ 2.42
PRPF40B-206ENST00000547764 TEX14Q8IWB6 1497 aa30.14■■■□□ 2.42
PRPF40B-206ENST00000547764 PCF11O94913 1555 aaKnown RBP30.13■■■□□ 2.41
PRPF40B-206ENST00000547764 MAGI3Q5TCQ9 1506 aa30.12■■■□□ 2.41
PRPF40B-206ENST00000547764 KDM6BO15054 1643 aa30.12■■■□□ 2.41
PRPF40B-206ENST00000547764 ABCA9Q8IUA7 1624 aa30.11■■■□□ 2.41
PRPF40B-206ENST00000547764 LRRIQ1Q96JM4 1722 aa30.08■■■□□ 2.41
PRPF40B-206ENST00000547764 CDK11AQ9UQ88 783 aaPredicted RBP30.07■■■□□ 2.4
PRPF40B-206ENST00000547764 FYCO1Q9BQS8 1478 aa30.06■■■□□ 2.4
PRPF40B-206ENST00000547764 COL17A1Q9UMD9 1497 aaPredicted RBP30.02■■■□□ 2.4
PRPF40B-206ENST00000547764 CCDC18Q5T9S5 1454 aa30.01■■■□□ 2.4
PRPF40B-206ENST00000547764 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30■■■□□ 2.39
PRPF40B-206ENST00000547764 TROQ12816 1431 aaPredicted RBP29.96■■■□□ 2.39
PRPF40B-206ENST00000547764 TTC37Q6PGP7 1564 aa29.94■■■□□ 2.38
PRPF40B-206ENST00000547764 PHLDB1Q86UU1 1377 aa29.9■■■□□ 2.38
PRPF40B-206ENST00000547764 KIF14Q15058 1648 aa29.89■■■□□ 2.37
PRPF40B-206ENST00000547764 NEO1Q92859 1461 aa29.88■■■□□ 2.37
PRPF40B-206ENST00000547764 ARAP3Q8WWN8 1544 aa29.86■■■□□ 2.37
PRPF40B-206ENST00000547764 PLCH2O75038 1416 aa29.83■■■□□ 2.37
PRPF40B-206ENST00000547764 FANCAO15360 1455 aa29.82■■■□□ 2.36
PRPF40B-206ENST00000547764 VPS8Q8N3P4 1428 aa29.81■■■□□ 2.36
PRPF40B-206ENST00000547764 AKNAQ7Z591 1439 aa29.79■■■□□ 2.36
PRPF40B-206ENST00000547764 MYO5CQ9NQX4 1742 aa29.76■■■□□ 2.36
PRPF40B-206ENST00000547764 CFAP74Q9C0B2 1584 aa29.76■■■□□ 2.35
PRPF40B-206ENST00000547764 RAPGEF3O95398 923 aa29.75■■■□□ 2.35
PRPF40B-206ENST00000547764 EFCAB2Q5VUJ9 269 aa29.73■■■□□ 2.35
PRPF40B-206ENST00000547764 MTUS2Q5JR59 1369 aa29.73■■■□□ 2.35
PRPF40B-206ENST00000547764 DENND4BO75064 1496 aaPredicted RBP29.68■■■□□ 2.34
PRPF40B-206ENST00000547764 ARHGAP5Q13017 1502 aa29.68■■■□□ 2.34
PRPF40B-206ENST00000547764 ADGRL1O94910 1474 aa29.66■■■□□ 2.34
PRPF40B-206ENST00000547764 FRMPD1Q5SYB0 1578 aa29.65■■■□□ 2.34
PRPF40B-206ENST00000547764 CDC42BPBQ9Y5S2 1711 aa29.65■■■□□ 2.34
PRPF40B-206ENST00000547764 SCAPERQ9BY12 1400 aa29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms