RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, human

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCD1-204	ENST00000547637	IGF1R	P08069	1367 aa		40.21	■■■■■ 4.03
SMARCD1-204	ENST00000547637	RUSC2	Q8N2Y8	1516 aa		40.2	■■■■■ 4.03
SMARCD1-204	ENST00000547637	AEBP2	Q6ZN18	517 aa	Predicted RBP	40.19	■■■■■ 4.02
SMARCD1-204	ENST00000547637	CUL7	Q14999	1698 aa		40.14	■■■■■ 4.02
SMARCD1-204	ENST00000547637	KIAA0586	Q9BVV6	1533 aa		40.12	■■■■■ 4.01
SMARCD1-204	ENST00000547637	CARMIL1	Q5VZK9	1371 aa		39.99	■■■■□ 3.99
SMARCD1-204	ENST00000547637	KIF13A	Q9H1H9	1805 aa		39.97	■■■■□ 3.99
SMARCD1-204	ENST00000547637	FAM69C	Q0P6D2	419 aa		39.96	■■■■□ 3.99
SMARCD1-204	ENST00000547637	ABCC10	Q5T3U5	1492 aa		39.89	■■■■□ 3.98
SMARCD1-204	ENST00000547637	MAPKBP1	O60336	1514 aa		39.89	■■■■□ 3.98
SMARCD1-204	ENST00000547637	ADCY10	Q96PN6	1610 aa		39.84	■■■■□ 3.97
SMARCD1-204	ENST00000547637	CARMIL2	Q6F5E8	1435 aa		39.84	■■■■□ 3.97
SMARCD1-204	ENST00000547637	PTPRG	P23470	1445 aa		39.82	■■■■□ 3.97
SMARCD1-204	ENST00000547637	TTBK1	Q5TCY1	1321 aa	Predicted RBP	39.75	■■■■□ 3.95
SMARCD1-204	ENST00000547637	TNIK	Q9UKE5	1360 aa		39.74	■■■■□ 3.95
SMARCD1-204	ENST00000547637	DIP2B	Q9P265	1576 aa		39.72	■■■■□ 3.95
SMARCD1-204	ENST00000547637	IQGAP2	Q13576	1575 aa		39.68	■■■■□ 3.94
SMARCD1-204	ENST00000547637	RAPGEF2	Q9Y4G8	1499 aa		39.6	■■■■□ 3.93
SMARCD1-204	ENST00000547637	ABCC2	Q92887	1545 aa		39.55	■■■■□ 3.92
SMARCD1-204	ENST00000547637	TSPOAP1	O95153	1857 aa		39.5	■■■■□ 3.91
SMARCD1-204	ENST00000547637	UACA	Q9BZF9	1416 aa		39.49	■■■■□ 3.91
SMARCD1-204	ENST00000547637	PLB1	Q6P1J6	1458 aa		39.48	■■■■□ 3.91
SMARCD1-204	ENST00000547637	UHRF1BP1L	A0JNW5	1464 aa		39.47	■■■■□ 3.91
SMARCD1-204	ENST00000547637	KDM6B	O15054	1643 aa		39.47	■■■■□ 3.91
SMARCD1-204	ENST00000547637	DISP1	Q96F81	1524 aa		39.45	■■■■□ 3.91
SMARCD1-204	ENST00000547637	ASXL2	Q76L83	1435 aa		39.43	■■■■□ 3.9
SMARCD1-204	ENST00000547637	UGGT2	Q9NYU1	1516 aa		39.41	■■■■□ 3.9
SMARCD1-204	ENST00000547637	GLI2	P10070	1586 aa		39.31	■■■■□ 3.88
SMARCD1-204	ENST00000547637	KIAA0556	O60303	1618 aa		39.29	■■■■□ 3.88
SMARCD1-204	ENST00000547637	KDM5B	Q9UGL1	1544 aa		39.27	■■■■□ 3.88
SMARCD1-204	ENST00000547637	GOLGA3	Q08378	1498 aa		39.23	■■■■□ 3.87
SMARCD1-204	ENST00000547637	FAM9A	Q8IZU1	332 aa	Predicted RBP	39.21	■■■■□ 3.87
SMARCD1-204	ENST00000547637	CTTNBP2	Q8WZ74	1663 aa		39.2	■■■■□ 3.87
SMARCD1-204	ENST00000547637	EPRS	P07814	1512 aa	Known RBP	39.17	■■■■□ 3.86
SMARCD1-204	ENST00000547637	ZCCHC11	Q5TAX3	1644 aa	Known RBP	39.15	■■■■□ 3.86
SMARCD1-204	ENST00000547637	TEX14	Q8IWB6	1497 aa		39.11	■■■■□ 3.85
SMARCD1-204	ENST00000547637	KDM4F	A0A1W2PPD8	638 aa		39.09	■■■■□ 3.85
SMARCD1-204	ENST00000547637	PRX	Q9BXM0	1461 aa		39.09	■■■■□ 3.85
SMARCD1-204	ENST00000547637	PPRC1	Q5VV67	1664 aa	Known RBP	39.09	■■■■□ 3.85
SMARCD1-204	ENST00000547637	MAP3K4	Q9Y6R4	1608 aa		39.04	■■■■□ 3.84
SMARCD1-204	ENST00000547637	WDR7	Q9Y4E6	1490 aa		39.04	■■■■□ 3.84
SMARCD1-204	ENST00000547637	KCNH8	Q96L42	1107 aa		38.95	■■■■□ 3.83
SMARCD1-204	ENST00000547637	ABCA8	O94911	1581 aa		38.93	■■■■□ 3.82
SMARCD1-204	ENST00000547637	CSRNP3	Q8WYN3	585 aa		38.91	■■■■□ 3.82
SMARCD1-204	ENST00000547637	COL17A1	Q9UMD9	1497 aa	Predicted RBP	38.87	■■■■□ 3.81
SMARCD1-204	ENST00000547637	CD109	Q6YHK3	1445 aa		38.87	■■■■□ 3.81
SMARCD1-204	ENST00000547637	P3H3	Q8IVL6	736 aa		38.83	■■■■□ 3.81
SMARCD1-204	ENST00000547637	CFAP43	Q8NDM7	1665 aa		38.81	■■■■□ 3.8
SMARCD1-204	ENST00000547637	MAGI3	Q5TCQ9	1506 aa		38.79	■■■■□ 3.8
SMARCD1-204	ENST00000547637	ADGRL1	O94910	1474 aa		38.75	■■■■□ 3.79
SMARCD1-204	ENST00000547637	EEA1	Q15075	1411 aa		38.72	■■■■□ 3.79
SMARCD1-204	ENST00000547637	ARID3C	A6NKF2	412 aa		38.7	■■■■□ 3.79
SMARCD1-204	ENST00000547637	ATP10B	O94823	1461 aa		38.66	■■■■□ 3.78
SMARCD1-204	ENST00000547637	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	38.64	■■■■□ 3.78
SMARCD1-204	ENST00000547637	HNRNPUL2	Q1KMD3	747 aa	Known RBP	38.64	■■■■□ 3.78
SMARCD1-204	ENST00000547637	SAMD9	Q5K651	1589 aa		38.6	■■■■□ 3.77
SMARCD1-204	ENST00000547637	RANGAP1	P46060	587 aa	Predicted RBP	38.56	■■■■□ 3.76
SMARCD1-204	ENST00000547637	PHLDB1	Q86UU1	1377 aa		38.56	■■■■□ 3.76
SMARCD1-204	ENST00000547637	RAPGEF6	Q8TEU7	1601 aa		38.54	■■■■□ 3.76
SMARCD1-204	ENST00000547637	ARAP3	Q8WWN8	1544 aa		38.48	■■■■□ 3.75
SMARCD1-204	ENST00000547637	ABCA9	Q8IUA7	1624 aa		38.45	■■■■□ 3.75
SMARCD1-204	ENST00000547637	PLEKHD1	A6NEE1	506 aa		38.41	■■■■□ 3.74
SMARCD1-204	ENST00000547637	FHOD3	Q2V2M9	1422 aa		38.38	■■■■□ 3.74
SMARCD1-204	ENST00000547637	NUP153	P49790	1475 aa	Known RBP	38.35	■■■■□ 3.73
SMARCD1-204	ENST00000547637	NEO1	Q92859	1461 aa		38.35	■■■■□ 3.73
SMARCD1-204	ENST00000547637	EFCAB5	A4FU69	1503 aa		38.3	■■■■□ 3.72
SMARCD1-204	ENST00000547637	KIF21B	O75037	1637 aa		38.3	■■■■□ 3.72
SMARCD1-204	ENST00000547637	RAPGEF3	O95398	923 aa		38.28	■■■■□ 3.72
SMARCD1-204	ENST00000547637	HECW2	Q9P2P5	1572 aa		38.23	■■■■□ 3.71
SMARCD1-204	ENST00000547637	UBTF	P17480	764 aa	Known RBP	38.22	■■■■□ 3.71
SMARCD1-204	ENST00000547637	ARID4B	Q4LE39	1312 aa	Predicted RBP	38.14	■■■■□ 3.7
SMARCD1-204	ENST00000547637	DENND4B	O75064	1496 aa	Predicted RBP	38.09	■■■■□ 3.69
SMARCD1-204	ENST00000547637	EHMT2	Q96KQ7	1210 aa		38.09	■■■■□ 3.69
SMARCD1-204	ENST00000547637	AKNA	Q7Z591	1439 aa		38.08	■■■■□ 3.69
SMARCD1-204	ENST00000547637	ATP1B4	Q9UN42	357 aa	Predicted RBP	38.08	■■■■□ 3.69
SMARCD1-204	ENST00000547637	CFAP74	Q9C0B2	1584 aa		38.07	■■■■□ 3.69
SMARCD1-204	ENST00000547637	FANCA	O15360	1455 aa		38.07	■■■■□ 3.68
SMARCD1-204	ENST00000547637	FMN1	Q68DA7	1419 aa		38.04	■■■■□ 3.68
SMARCD1-204	ENST00000547637	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	38.04	■■■■□ 3.68
SMARCD1-204	ENST00000547637	ILDR1	Q86SU0	546 aa	Predicted RBP	38.04	■■■■□ 3.68
SMARCD1-204	ENST00000547637	CDK11A	Q9UQ88	783 aa	Predicted RBP	38.04	■■■■□ 3.68
SMARCD1-204	ENST00000547637	CHIC1	Q5VXU3	224 aa		38.02	■■■■□ 3.68
SMARCD1-204	ENST00000547637	FRMPD1	Q5SYB0	1578 aa		38	■■■■□ 3.67
SMARCD1-204	ENST00000547637	ADAMTSL3	P82987	1691 aa		37.99	■■■■□ 3.67
SMARCD1-204	ENST00000547637	PTPRM	P28827	1452 aa		37.99	■■■■□ 3.67
SMARCD1-204	ENST00000547637	CDK13	Q14004	1512 aa	Known RBP	37.96	■■■■□ 3.67
SMARCD1-204	ENST00000547637	BCORL1	Q5H9F3	1711 aa		37.93	■■■■□ 3.66
SMARCD1-204	ENST00000547637	TTC37	Q6PGP7	1564 aa		37.93	■■■■□ 3.66
SMARCD1-204	ENST00000547637	RICTOR	Q6R327	1708 aa		37.92	■■■■□ 3.66
SMARCD1-204	ENST00000547637	HECW1	Q76N89	1606 aa		37.91	■■■■□ 3.66
SMARCD1-204	ENST00000547637	ARHGEF40	Q8TER5	1519 aa		37.9	■■■■□ 3.66
SMARCD1-204	ENST00000547637	POGZ	Q7Z3K3	1410 aa		37.89	■■■■□ 3.66
SMARCD1-204	ENST00000547637	PLCH2	O75038	1416 aa		37.88	■■■■□ 3.66
SMARCD1-204	ENST00000547637	ARHGAP35	Q9NRY4	1499 aa		37.87	■■■■□ 3.65
SMARCD1-204	ENST00000547637	MAGI2	Q86UL8	1455 aa		37.85	■■■■□ 3.65
SMARCD1-204	ENST00000547637	EFCAB2	Q5VUJ9	269 aa		37.85	■■■■□ 3.65
SMARCD1-204	ENST00000547637	SCAPER	Q9BY12	1400 aa		37.82	■■■■□ 3.64
SMARCD1-204	ENST00000547637	ZMYM4	Q5VZL5	1548 aa		37.82	■■■■□ 3.64
SMARCD1-204	ENST00000547637	MADD	Q8WXG6	1647 aa		37.81	■■■■□ 3.64
SMARCD1-204	ENST00000547637	ZFYVE16	Q7Z3T8	1539 aa		37.81	■■■■□ 3.64

Retrieved 100 of 20,778 RNA–protein pairs in 13 ms