RNA–Protein interactions for RNA: ENST00000546814.1

LETMD1-204, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-204ENST00000546814 DMRT2Q9Y5R5 561 aa12.4□□□□□ -0.42
LETMD1-204ENST00000546814 SHROOM2Q13796 1616 aa12.39□□□□□ -0.43
LETMD1-204ENST00000546814 WRNQ14191 1432 aaPredicted RBP eCLIP12.38□□□□□ -0.43
LETMD1-204ENST00000546814 CEP170Q5SW79 1584 aa12.37□□□□□ -0.43
LETMD1-204ENST00000546814 FHAD1B1AJZ9 1412 aa12.37□□□□□ -0.43
LETMD1-204ENST00000546814 ADAMTS12P58397 1594 aa12.36□□□□□ -0.43
LETMD1-204ENST00000546814 ERCC6L2Q5T890 1561 aa12.35□□□□□ -0.43
LETMD1-204ENST00000546814 ERICH3Q5RHP9 1530 aa12.35□□□□□ -0.43
LETMD1-204ENST00000546814 TOP2BQ02880 1626 aa12.32□□□□□ -0.44
LETMD1-204ENST00000546814 BIVM-ERCC5R4GMW8 1640 aa12.31□□□□□ -0.44
LETMD1-204ENST00000546814 ABCC10Q5T3U5 1492 aa12.26□□□□□ -0.45
LETMD1-204ENST00000546814 MAPKBP1O60336 1514 aa12.26□□□□□ -0.45
LETMD1-204ENST00000546814 KIF13AQ9H1H9 1805 aa12.25□□□□□ -0.45
LETMD1-204ENST00000546814 JPH4Q96JJ6 628 aa12.25□□□□□ -0.45
LETMD1-204ENST00000546814 PRG4Q92954 1404 aaPredicted RBP12.25□□□□□ -0.45
LETMD1-204ENST00000546814 RUSC2Q8N2Y8 1516 aa12.2□□□□□ -0.46
LETMD1-204ENST00000546814 DIP2BQ9P265 1576 aa12.18□□□□□ -0.46
LETMD1-204ENST00000546814 KIAA0586Q9BVV6 1533 aa12.16□□□□□ -0.46
LETMD1-204ENST00000546814 FAM69CQ0P6D2 419 aa12.15□□□□□ -0.46
LETMD1-204ENST00000546814 CNKSR2Q8WXI2 1034 aa12.15□□□□□ -0.46
LETMD1-204ENST00000546814 ADCY10Q96PN6 1610 aa12.15□□□□□ -0.47
LETMD1-204ENST00000546814 NPM1P06748 294 aaKnown RBP eCLIP12.13□□□□□ -0.47
LETMD1-204ENST00000546814 IGF1RP08069 1367 aa12.13□□□□□ -0.47
LETMD1-204ENST00000546814 KDM4FA0A1W2PPD8 638 aa12.1□□□□□ -0.47
LETMD1-204ENST00000546814 CUL7Q14999 1698 aa12.07□□□□□ -0.48
LETMD1-204ENST00000546814 SUPT5HO00267 1087 aaKnown RBP12.07□□□□□ -0.48
LETMD1-204ENST00000546814 HOXD11P31277 338 aaPredicted RBP12.07□□□□□ -0.48
LETMD1-204ENST00000546814 KDM6BO15054 1643 aa12.07□□□□□ -0.48
LETMD1-204ENST00000546814 GLI2P10070 1586 aa12.06□□□□□ -0.48
LETMD1-204ENST00000546814 KIF27Q86VH2 1401 aa12.06□□□□□ -0.48
LETMD1-204ENST00000546814 UHRF1BP1LA0JNW5 1464 aa12.06□□□□□ -0.48
LETMD1-204ENST00000546814 ABCC2Q92887 1545 aa12.05□□□□□ -0.48
LETMD1-204ENST00000546814 PTPRGP23470 1445 aa12.04□□□□□ -0.48
LETMD1-204ENST00000546814 PLB1Q6P1J6 1458 aa12.03□□□□□ -0.48
LETMD1-204ENST00000546814 TNIKQ9UKE5 1360 aa12.02□□□□□ -0.49
LETMD1-204ENST00000546814 RNF216Q9NWF9 866 aaPredicted RBP12.01□□□□□ -0.49
LETMD1-204ENST00000546814 CARMIL2Q6F5E8 1435 aa12.01□□□□□ -0.49
LETMD1-204ENST00000546814 CARMIL1Q5VZK9 1371 aa12□□□□□ -0.49
LETMD1-204ENST00000546814 ASXL2Q76L83 1435 aa11.99□□□□□ -0.49
LETMD1-204ENST00000546814 PPRC1Q5VV67 1664 aaKnown RBP11.98□□□□□ -0.49
LETMD1-204ENST00000546814 KDM5BQ9UGL1 1544 aa11.98□□□□□ -0.49
LETMD1-204ENST00000546814 NCBP3Q53F19 620 aaKnown RBP11.98□□□□□ -0.49
LETMD1-204ENST00000546814 UACAQ9BZF9 1416 aa11.96□□□□□ -0.49
LETMD1-204ENST00000546814 DISP1Q96F81 1524 aa11.96□□□□□ -0.5
LETMD1-204ENST00000546814 IQGAP2Q13576 1575 aa11.95□□□□□ -0.5
LETMD1-204ENST00000546814 COL17A1Q9UMD9 1497 aaPredicted RBP11.95□□□□□ -0.5
LETMD1-204ENST00000546814 EPRSP07814 1512 aaKnown RBP11.94□□□□□ -0.5
LETMD1-204ENST00000546814 UGGT2Q9NYU1 1516 aa11.94□□□□□ -0.5
LETMD1-204ENST00000546814 MAP3K4Q9Y6R4 1608 aa11.93□□□□□ -0.5
LETMD1-204ENST00000546814 TSPOAP1O95153 1857 aa11.92□□□□□ -0.5
LETMD1-204ENST00000546814 ADGRL1O94910 1474 aa11.92□□□□□ -0.5
LETMD1-204ENST00000546814 TEX14Q8IWB6 1497 aa11.92□□□□□ -0.5
LETMD1-204ENST00000546814 ILDR1Q86SU0 546 aaPredicted RBP11.91□□□□□ -0.5
LETMD1-204ENST00000546814 MAGI3Q5TCQ9 1506 aa11.86□□□□□ -0.51
LETMD1-204ENST00000546814 NPM3O75607 178 aaKnown RBP11.86□□□□□ -0.51
LETMD1-204ENST00000546814 WDR7Q9Y4E6 1490 aa11.86□□□□□ -0.51
LETMD1-204ENST00000546814 RAPGEF2Q9Y4G8 1499 aa11.86□□□□□ -0.51
LETMD1-204ENST00000546814 KIAA0556O60303 1618 aa11.85□□□□□ -0.51
LETMD1-204ENST00000546814 ZCCHC11Q5TAX3 1644 aaKnown RBP11.84□□□□□ -0.51
LETMD1-204ENST00000546814 HECW2Q9P2P5 1572 aa11.81□□□□□ -0.52
LETMD1-204ENST00000546814 KCNA4P22459 653 aa11.8□□□□□ -0.52
LETMD1-204ENST00000546814 CFAP43Q8NDM7 1665 aa11.79□□□□□ -0.52
LETMD1-204ENST00000546814 GOLGA3Q08378 1498 aa11.79□□□□□ -0.52
LETMD1-204ENST00000546814 ARAP3Q8WWN8 1544 aa11.79□□□□□ -0.52
LETMD1-204ENST00000546814 ABCA8O94911 1581 aa11.79□□□□□ -0.52
LETMD1-204ENST00000546814 PHLDB1Q86UU1 1377 aa11.79□□□□□ -0.52
LETMD1-204ENST00000546814 CD109Q6YHK3 1445 aa11.78□□□□□ -0.52
LETMD1-204ENST00000546814 TTBK1Q5TCY1 1321 aaPredicted RBP11.75□□□□□ -0.53
LETMD1-204ENST00000546814 PRXQ9BXM0 1461 aa11.74□□□□□ -0.53
LETMD1-204ENST00000546814 CTTNBP2Q8WZ74 1663 aa11.71□□□□□ -0.54
LETMD1-204ENST00000546814 DCAF8L1A6NGE4 600 aa11.7□□□□□ -0.54
LETMD1-204ENST00000546814 NEO1Q92859 1461 aa11.69□□□□□ -0.54
LETMD1-204ENST00000546814 ABCA9Q8IUA7 1624 aa11.68□□□□□ -0.54
LETMD1-204ENST00000546814 FBXO41Q8TF61 875 aa11.68□□□□□ -0.54
LETMD1-204ENST00000546814 ATP10BO94823 1461 aa11.68□□□□□ -0.54
LETMD1-204ENST00000546814 ADAMTSL3P82987 1691 aa11.68□□□□□ -0.54
LETMD1-204ENST00000546814 PTPRMP28827 1452 aa11.66□□□□□ -0.54
LETMD1-204ENST00000546814 KCNH8Q96L42 1107 aa11.65□□□□□ -0.54
LETMD1-204ENST00000546814 KIF21BO75037 1637 aa11.64□□□□□ -0.55
LETMD1-204ENST00000546814 FAM9AQ8IZU1 332 aaPredicted RBP11.62□□□□□ -0.55
LETMD1-204ENST00000546814 SAMD9Q5K651 1589 aa11.62□□□□□ -0.55
LETMD1-204ENST00000546814 PCF11O94913 1555 aaKnown RBP11.59□□□□□ -0.55
LETMD1-204ENST00000546814 FRMPD1Q5SYB0 1578 aa11.59□□□□□ -0.55
LETMD1-204ENST00000546814 LMTK3Q96Q04 1460 aa11.59□□□□□ -0.55
LETMD1-204ENST00000546814 BCORL1Q5H9F3 1711 aa11.59□□□□□ -0.55
LETMD1-204ENST00000546814 FHOD3Q2V2M9 1422 aa11.59□□□□□ -0.55
LETMD1-204ENST00000546814 RAPGEF3O95398 923 aa11.57□□□□□ -0.56
LETMD1-204ENST00000546814 NUP153P49790 1475 aaKnown RBP11.57□□□□□ -0.56
LETMD1-204ENST00000546814 RAPGEF6Q8TEU7 1601 aa11.56□□□□□ -0.56
LETMD1-204ENST00000546814 ARHGEF40Q8TER5 1519 aa11.55□□□□□ -0.56
LETMD1-204ENST00000546814 MAGI2Q86UL8 1455 aa11.55□□□□□ -0.56
LETMD1-204ENST00000546814 ZMYM4Q5VZL5 1548 aa11.55□□□□□ -0.56
LETMD1-204ENST00000546814 MADDQ8WXG6 1647 aa11.53□□□□□ -0.56
LETMD1-204ENST00000546814 DENND4BO75064 1496 aaPredicted RBP11.53□□□□□ -0.56
LETMD1-204ENST00000546814 RNF39Q9H2S5 420 aa11.53□□□□□ -0.56
LETMD1-204ENST00000546814 RICTORQ6R327 1708 aa11.52□□□□□ -0.56
LETMD1-204ENST00000546814 CSRNP3Q8WYN3 585 aa11.52□□□□□ -0.57
LETMD1-204ENST00000546814 AKNAQ7Z591 1439 aa11.52□□□□□ -0.57
LETMD1-204ENST00000546814 POGZQ7Z3K3 1410 aa11.51□□□□□ -0.57
LETMD1-204ENST00000546814 CFAP74Q9C0B2 1584 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms