RNA–Protein interactions for RNA: ENST00000546653.5

VDR-203, Transcript of vitamin D receptor, humanhuman

TSL 5

Gene VDR, Length 937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-203ENST00000546653 WRNQ14191 1432 aaPredicted RBP eCLIP24.57■■□□□ 1.52
VDR-203ENST00000546653 KDM6BO15054 1643 aa24.57■■□□□ 1.52
VDR-203ENST00000546653 JPH4Q96JJ6 628 aa24.53■■□□□ 1.52
VDR-203ENST00000546653 ERICH3Q5RHP9 1530 aa24.52■■□□□ 1.52
VDR-203ENST00000546653 ADCY10Q96PN6 1610 aa24.5■■□□□ 1.51
VDR-203ENST00000546653 TSPOAP1O95153 1857 aa24.5■■□□□ 1.51
VDR-203ENST00000546653 BIVM-ERCC5R4GMW8 1640 aa24.47■■□□□ 1.51
VDR-203ENST00000546653 NPM1P06748 294 aaKnown RBP eCLIP24.47■■□□□ 1.51
VDR-203ENST00000546653 TOP2BQ02880 1626 aa24.46■■□□□ 1.51
VDR-203ENST00000546653 RUSC2Q8N2Y8 1516 aa24.45■■□□□ 1.51
VDR-203ENST00000546653 ADGRL1O94910 1474 aa24.3■■□□□ 1.48
VDR-203ENST00000546653 PPRC1Q5VV67 1664 aaKnown RBP24.27■■□□□ 1.48
VDR-203ENST00000546653 HECW2Q9P2P5 1572 aa24.23■■□□□ 1.47
VDR-203ENST00000546653 KIAA0586Q9BVV6 1533 aa24.21■■□□□ 1.47
VDR-203ENST00000546653 GLI2P10070 1586 aa24.16■■□□□ 1.46
VDR-203ENST00000546653 COL17A1Q9UMD9 1497 aaPredicted RBP24.15■■□□□ 1.46
VDR-203ENST00000546653 PTPRGP23470 1445 aa24.12■■□□□ 1.45
VDR-203ENST00000546653 ASXL2Q76L83 1435 aa24.12■■□□□ 1.45
VDR-203ENST00000546653 ABCC2Q92887 1545 aa24.12■■□□□ 1.45
VDR-203ENST00000546653 PLB1Q6P1J6 1458 aa24.08■■□□□ 1.45
VDR-203ENST00000546653 CUL7Q14999 1698 aa24.07■■□□□ 1.44
VDR-203ENST00000546653 TTBK1Q5TCY1 1321 aaPredicted RBP24.05■■□□□ 1.44
VDR-203ENST00000546653 IGF1RP08069 1367 aa24.04■■□□□ 1.44
VDR-203ENST00000546653 SUPT5HO00267 1087 aaKnown RBP24.03■■□□□ 1.44
VDR-203ENST00000546653 MAP3K4Q9Y6R4 1608 aa24.02■■□□□ 1.44
VDR-203ENST00000546653 TNIKQ9UKE5 1360 aa24.01■■□□□ 1.43
VDR-203ENST00000546653 UHRF1BP1LA0JNW5 1464 aa24■■□□□ 1.43
VDR-203ENST00000546653 EPRSP07814 1512 aaKnown RBP23.98■■□□□ 1.43
VDR-203ENST00000546653 CARMIL2Q6F5E8 1435 aa23.94■■□□□ 1.42
VDR-203ENST00000546653 TEX14Q8IWB6 1497 aa23.93■■□□□ 1.42
VDR-203ENST00000546653 UACAQ9BZF9 1416 aa23.93■■□□□ 1.42
VDR-203ENST00000546653 FBXO41Q8TF61 875 aa23.91■■□□□ 1.42
VDR-203ENST00000546653 KDM5BQ9UGL1 1544 aa23.9■■□□□ 1.42
VDR-203ENST00000546653 KIF27Q86VH2 1401 aa23.9■■□□□ 1.42
VDR-203ENST00000546653 IQGAP2Q13576 1575 aa23.87■■□□□ 1.41
VDR-203ENST00000546653 ZCCHC11Q5TAX3 1644 aaKnown RBP23.87■■□□□ 1.41
VDR-203ENST00000546653 DISP1Q96F81 1524 aa23.86■■□□□ 1.41
VDR-203ENST00000546653 CARMIL1Q5VZK9 1371 aa23.83■■□□□ 1.41
VDR-203ENST00000546653 KIF21BO75037 1637 aa23.75■■□□□ 1.39
VDR-203ENST00000546653 WDR7Q9Y4E6 1490 aa23.75■■□□□ 1.39
VDR-203ENST00000546653 MAGI3Q5TCQ9 1506 aa23.72■■□□□ 1.39
VDR-203ENST00000546653 UGGT2Q9NYU1 1516 aa23.7■■□□□ 1.38
VDR-203ENST00000546653 CFAP43Q8NDM7 1665 aa23.7■■□□□ 1.38
VDR-203ENST00000546653 KIAA0556O60303 1618 aa23.69■■□□□ 1.38
VDR-203ENST00000546653 CD109Q6YHK3 1445 aa23.67■■□□□ 1.38
VDR-203ENST00000546653 ADAMTSL3P82987 1691 aa23.61■■□□□ 1.37
VDR-203ENST00000546653 PTPRMP28827 1452 aa23.61■■□□□ 1.37
VDR-203ENST00000546653 KCNH8Q96L42 1107 aa23.58■■□□□ 1.37
VDR-203ENST00000546653 ARAP3Q8WWN8 1544 aa23.56■■□□□ 1.36
VDR-203ENST00000546653 ABCA8O94911 1581 aa23.53■■□□□ 1.36
VDR-203ENST00000546653 RAPGEF2Q9Y4G8 1499 aa23.53■■□□□ 1.36
VDR-203ENST00000546653 PCF11O94913 1555 aaKnown RBP23.52■■□□□ 1.36
VDR-203ENST00000546653 LMTK3Q96Q04 1460 aa23.5■■□□□ 1.35
VDR-203ENST00000546653 BCORL1Q5H9F3 1711 aa23.47■■□□□ 1.35
VDR-203ENST00000546653 MADDQ8WXG6 1647 aa23.46■■□□□ 1.35
VDR-203ENST00000546653 CTTNBP2Q8WZ74 1663 aa23.43■■□□□ 1.34
VDR-203ENST00000546653 GOLGA3Q08378 1498 aa23.38■■□□□ 1.33
VDR-203ENST00000546653 RAPGEF3O95398 923 aa23.38■■□□□ 1.33
VDR-203ENST00000546653 ABCA9Q8IUA7 1624 aa23.37■■□□□ 1.33
VDR-203ENST00000546653 PHLDB1Q86UU1 1377 aa23.37■■□□□ 1.33
VDR-203ENST00000546653 FRMPD1Q5SYB0 1578 aa23.36■■□□□ 1.33
VDR-203ENST00000546653 RIMS1Q86UR5 1692 aaKnown RBP23.35■■□□□ 1.33
VDR-203ENST00000546653 ATP10BO94823 1461 aa23.32■■□□□ 1.32
VDR-203ENST00000546653 HSPA2P54652 639 aa23.32■■□□□ 1.32
VDR-203ENST00000546653 ILDR2Q71H61 639 aa23.32■■□□□ 1.32
VDR-203ENST00000546653 ARID4BQ4LE39 1312 aaPredicted RBP23.31■■□□□ 1.32
VDR-203ENST00000546653 ARID3CA6NKF2 412 aa23.3■■□□□ 1.32
VDR-203ENST00000546653 CERKQ8TCT0 537 aa23.3■■□□□ 1.32
VDR-203ENST00000546653 NEO1Q92859 1461 aa23.3■■□□□ 1.32
VDR-203ENST00000546653 SOCS7O14512 581 aa23.26■■□□□ 1.31
VDR-203ENST00000546653 ARHGEF40Q8TER5 1519 aa23.24■■□□□ 1.31
VDR-203ENST00000546653 DISP3Q9P2K9 1392 aa23.23■■□□□ 1.31
VDR-203ENST00000546653 RICTORQ6R327 1708 aa23.2■■□□□ 1.3
VDR-203ENST00000546653 SIGLEC1Q9BZZ2 1709 aa23.19■■□□□ 1.3
VDR-203ENST00000546653 PLPPR3Q6T4P5 718 aa23.16■■□□□ 1.3
VDR-203ENST00000546653 P3H3Q8IVL6 736 aa23.14■■□□□ 1.29
VDR-203ENST00000546653 DENND4BO75064 1496 aaPredicted RBP23.12■■□□□ 1.29
VDR-203ENST00000546653 PRXQ9BXM0 1461 aa23.12■■□□□ 1.29
VDR-203ENST00000546653 FHOD3Q2V2M9 1422 aa23.11■■□□□ 1.29
VDR-203ENST00000546653 RAPGEF6Q8TEU7 1601 aa23.11■■□□□ 1.29
VDR-203ENST00000546653 FANCAO15360 1455 aa23.11■■□□□ 1.29
VDR-203ENST00000546653 FER1L4A9Z1Z3 1794 aa23.09■■□□□ 1.29
VDR-203ENST00000546653 POGZQ7Z3K3 1410 aa23.08■■□□□ 1.29
VDR-203ENST00000546653 ZMYM4Q5VZL5 1548 aa23.08■■□□□ 1.28
VDR-203ENST00000546653 AKNAQ7Z591 1439 aa23.08■■□□□ 1.28
VDR-203ENST00000546653 TTC37Q6PGP7 1564 aa23.07■■□□□ 1.28
VDR-203ENST00000546653 YEATS2Q9ULM3 1422 aa23.07■■□□□ 1.28
VDR-203ENST00000546653 FAM9AQ8IZU1 332 aaPredicted RBP23.06■■□□□ 1.28
VDR-203ENST00000546653 SAMD9Q5K651 1589 aa23.06■■□□□ 1.28
VDR-203ENST00000546653 SPATA31D1Q6ZQQ2 1576 aa23.05■■□□□ 1.28
VDR-203ENST00000546653 ZFYVE16Q7Z3T8 1539 aa23.04■■□□□ 1.28
VDR-203ENST00000546653 NUP153P49790 1475 aaKnown RBP23.04■■□□□ 1.28
VDR-203ENST00000546653 STRCQ7RTU9 1775 aa23.04■■□□□ 1.28
VDR-203ENST00000546653 PREX1Q8TCU6 1659 aa23.03■■□□□ 1.28
VDR-203ENST00000546653 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.02■■□□□ 1.28
VDR-203ENST00000546653 HNRNPUL2Q1KMD3 747 aaKnown RBP23.02■■□□□ 1.28
VDR-203ENST00000546653 EFCAB5A4FU69 1503 aa23.02■■□□□ 1.28
VDR-203ENST00000546653 MLECQ14165 292 aa23.01■■□□□ 1.27
VDR-203ENST00000546653 CFAP74Q9C0B2 1584 aa23.01■■□□□ 1.27
VDR-203ENST00000546653 HECW1Q76N89 1606 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms