RNA–Protein interactions for RNA: ENST00000546618.2

SVOP-201, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-201ENST00000546618 GRIN2AQ12879 1464 aa27.32■■□□□ 1.96
SVOP-201ENST00000546618 LOC105371045A0A1W2PR82 267 aa27.29■■□□□ 1.96
SVOP-201ENST00000546618 EHMT2Q96KQ7 1210 aa27.28■■□□□ 1.96
SVOP-201ENST00000546618 UBTFP17480 764 aaKnown RBP27.27■■□□□ 1.96
SVOP-201ENST00000546618 CYB5RLQ6IPT4 315 aa27.25■■□□□ 1.95
SVOP-201ENST00000546618 ARAP1Q96P48 1450 aa27.21■■□□□ 1.95
SVOP-201ENST00000546618 NUP160Q12769 1436 aa27.18■■□□□ 1.94
SVOP-201ENST00000546618 TNIKQ9UKE5 1360 aa27.17■■□□□ 1.94
SVOP-201ENST00000546618 CLASP1Q7Z460 1538 aa27.14■■□□□ 1.94
SVOP-201ENST00000546618 KIAA0586Q9BVV6 1533 aa27.11■■□□□ 1.93
SVOP-201ENST00000546618 CEP170Q5SW79 1584 aa27.1■■□□□ 1.93
SVOP-201ENST00000546618 CTTNBP2Q8WZ74 1663 aa27■■□□□ 1.91
SVOP-201ENST00000546618 IQGAP2Q13576 1575 aa27■■□□□ 1.91
SVOP-201ENST00000546618 JPH4Q96JJ6 628 aa26.99■■□□□ 1.91
SVOP-201ENST00000546618 TRHP20396 242 aaPredicted RBP26.96■■□□□ 1.91
SVOP-201ENST00000546618 RANGAP1P46060 587 aaPredicted RBP26.92■■□□□ 1.9
SVOP-201ENST00000546618 UGGT2Q9NYU1 1516 aa26.9■■□□□ 1.9
SVOP-201ENST00000546618 CEP162Q5TB80 1403 aa26.9■■□□□ 1.9
SVOP-201ENST00000546618 CLIP1P30622 1438 aa26.88■■□□□ 1.89
SVOP-201ENST00000546618 SHROOM2Q13796 1616 aa26.83■■□□□ 1.88
SVOP-201ENST00000546618 CARMIL2Q6F5E8 1435 aa26.82■■□□□ 1.88
SVOP-201ENST00000546618 PRG4Q92954 1404 aaPredicted RBP26.82■■□□□ 1.88
SVOP-201ENST00000546618 EFCAB5A4FU69 1503 aa26.81■■□□□ 1.88
SVOP-201ENST00000546618 ARHGAP35Q9NRY4 1499 aa26.79■■□□□ 1.88
SVOP-201ENST00000546618 DISP1Q96F81 1524 aa26.78■■□□□ 1.88
SVOP-201ENST00000546618 P3H3Q8IVL6 736 aa26.76■■□□□ 1.87
SVOP-201ENST00000546618 SAMD9Q5K651 1589 aa26.75■■□□□ 1.87
SVOP-201ENST00000546618 KIAA0556O60303 1618 aa26.71■■□□□ 1.87
SVOP-201ENST00000546618 FHOD3Q2V2M9 1422 aa26.67■■□□□ 1.86
SVOP-201ENST00000546618 ERCC6L2Q5T890 1561 aa26.63■■□□□ 1.85
SVOP-201ENST00000546618 PTPRGP23470 1445 aa26.62■■□□□ 1.85
SVOP-201ENST00000546618 FMN1Q68DA7 1419 aa26.61■■□□□ 1.85
SVOP-201ENST00000546618 TTBK1Q5TCY1 1321 aaPredicted RBP26.57■■□□□ 1.84
SVOP-201ENST00000546618 VPS8Q8N3P4 1428 aa26.55■■□□□ 1.84
SVOP-201ENST00000546618 CASKIN1Q8WXD9 1431 aa26.46■■□□□ 1.83
SVOP-201ENST00000546618 UACAQ9BZF9 1416 aa26.44■■□□□ 1.82
SVOP-201ENST00000546618 PLB1Q6P1J6 1458 aa26.43■■□□□ 1.82
SVOP-201ENST00000546618 ATP1B4Q9UN42 357 aaPredicted RBP26.41■■□□□ 1.82
SVOP-201ENST00000546618 FYCO1Q9BQS8 1478 aa26.4■■□□□ 1.82
SVOP-201ENST00000546618 ABCA8O94911 1581 aa26.4■■□□□ 1.82
SVOP-201ENST00000546618 UHRF1BP1LA0JNW5 1464 aa26.37■■□□□ 1.81
SVOP-201ENST00000546618 RAPGEF6Q8TEU7 1601 aa26.36■■□□□ 1.81
SVOP-201ENST00000546618 PCF11O94913 1555 aaKnown RBP26.35■■□□□ 1.81
SVOP-201ENST00000546618 APLP2Q06481 763 aa26.34■■□□□ 1.81
SVOP-201ENST00000546618 ABCC2Q92887 1545 aa26.34■■□□□ 1.81
SVOP-201ENST00000546618 NUP153P49790 1475 aaKnown RBP26.32■■□□□ 1.8
SVOP-201ENST00000546618 HECW1Q76N89 1606 aa26.32■■□□□ 1.8
SVOP-201ENST00000546618 CCDC18Q5T9S5 1454 aa26.27■■□□□ 1.8
SVOP-201ENST00000546618 EPRSP07814 1512 aaKnown RBP26.27■■□□□ 1.8
SVOP-201ENST00000546618 NPM1P06748 294 aaKnown RBP eCLIP26.25■■□□□ 1.79
SVOP-201ENST00000546618 MAP3K1Q13233 1512 aa26.24■■□□□ 1.79
SVOP-201ENST00000546618 ATP10BO94823 1461 aa26.24■■□□□ 1.79
SVOP-201ENST00000546618 ARID3CA6NKF2 412 aa26.24■■□□□ 1.79
SVOP-201ENST00000546618 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.24■■□□□ 1.79
SVOP-201ENST00000546618 HNRNPUL2Q1KMD3 747 aaKnown RBP26.24■■□□□ 1.79
SVOP-201ENST00000546618 AEBP2Q6ZN18 517 aaPredicted RBP26.24■■□□□ 1.79
SVOP-201ENST00000546618 ADCY10Q96PN6 1610 aa26.23■■□□□ 1.79
SVOP-201ENST00000546618 KDM5BQ9UGL1 1544 aa26.23■■□□□ 1.79
SVOP-201ENST00000546618 CDK11AQ9UQ88 783 aaPredicted RBP26.22■■□□□ 1.79
SVOP-201ENST00000546618 MAPKBP1O60336 1514 aa26.21■■□□□ 1.79
SVOP-201ENST00000546618 KIF13AQ9H1H9 1805 aa26.21■■□□□ 1.79
SVOP-201ENST00000546618 ABCC10Q5T3U5 1492 aa26.19■■□□□ 1.78
SVOP-201ENST00000546618 CDK13Q14004 1512 aaKnown RBP26.17■■□□□ 1.78
SVOP-201ENST00000546618 TIAM1Q13009 1591 aa26.16■■□□□ 1.78
SVOP-201ENST00000546618 PLEKHD1A6NEE1 506 aa26.15■■□□□ 1.78
SVOP-201ENST00000546618 FAM69CQ0P6D2 419 aa26.13■■□□□ 1.77
SVOP-201ENST00000546618 LRRIQ1Q96JM4 1722 aa26.12■■□□□ 1.77
SVOP-201ENST00000546618 KANK4Q5T7N3 995 aaPredicted RBP26.11■■□□□ 1.77
SVOP-201ENST00000546618 ZCCHC11Q5TAX3 1644 aaKnown RBP26.1■■□□□ 1.77
SVOP-201ENST00000546618 DIP2BQ9P265 1576 aa26.09■■□□□ 1.77
SVOP-201ENST00000546618 LRRC9Q6ZRR7 1453 aa26.09■■□□□ 1.77
SVOP-201ENST00000546618 CFAP43Q8NDM7 1665 aa26.09■■□□□ 1.77
SVOP-201ENST00000546618 MTUS2Q5JR59 1369 aa26.08■■□□□ 1.77
SVOP-201ENST00000546618 TROQ12816 1431 aaPredicted RBP26.05■■□□□ 1.76
SVOP-201ENST00000546618 ASXL2Q76L83 1435 aa26.02■■□□□ 1.76
SVOP-201ENST00000546618 MAGI3Q5TCQ9 1506 aa26.01■■□□□ 1.75
SVOP-201ENST00000546618 PPARGC1BQ86YN6 1023 aaKnown RBP26.01■■□□□ 1.75
SVOP-201ENST00000546618 EHBP1L1Q8N3D4 1523 aa26■■□□□ 1.75
SVOP-201ENST00000546618 WDR7Q9Y4E6 1490 aa25.98■■□□□ 1.75
SVOP-201ENST00000546618 KCNH8Q96L42 1107 aa25.96■■□□□ 1.75
SVOP-201ENST00000546618 NCOA2Q15596 1464 aa25.88■■□□□ 1.73
SVOP-201ENST00000546618 KDM6BO15054 1643 aa25.88■■□□□ 1.73
SVOP-201ENST00000546618 KIF14Q15058 1648 aa25.87■■□□□ 1.73
SVOP-201ENST00000546618 SUPT6HQ7KZ85 1726 aaKnown RBP25.86■■□□□ 1.73
SVOP-201ENST00000546618 GLI2P10070 1586 aa25.82■■□□□ 1.72
SVOP-201ENST00000546618 CCNB3Q8WWL7 1395 aa25.82■■□□□ 1.72
SVOP-201ENST00000546618 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.8■■□□□ 1.72
SVOP-201ENST00000546618 PHLDB1Q86UU1 1377 aa25.79■■□□□ 1.72
SVOP-201ENST00000546618 TSPOAP1O95153 1857 aa25.77■■□□□ 1.72
SVOP-201ENST00000546618 GPATCH8Q9UKJ3 1502 aaKnown RBP25.76■■□□□ 1.71
SVOP-201ENST00000546618 MYOM3Q5VTT5 1437 aa25.75■■□□□ 1.71
SVOP-201ENST00000546618 ABCA9Q8IUA7 1624 aa25.74■■□□□ 1.71
SVOP-201ENST00000546618 PLCH2O75038 1416 aa25.72■■□□□ 1.71
SVOP-201ENST00000546618 CFDP1Q9UEE9 299 aaPredicted RBP25.72■■□□□ 1.71
SVOP-201ENST00000546618 TTC37Q6PGP7 1564 aa25.72■■□□□ 1.71
SVOP-201ENST00000546618 CD109Q6YHK3 1445 aa25.71■■□□□ 1.71
SVOP-201ENST00000546618 MIA2Q96PC5 1412 aa25.71■■□□□ 1.71
SVOP-201ENST00000546618 PPRC1Q5VV67 1664 aaKnown RBP25.68■■□□□ 1.7
SVOP-201ENST00000546618 EFCAB2Q5VUJ9 269 aa25.67■■□□□ 1.7
SVOP-201ENST00000546618 FGD6Q6ZV73 1430 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms