RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 KDM6BO15054 1643 aa19.98■□□□□ 0.79
TMEM116-203ENST00000546537 WRNQ14191 1432 aaPredicted RBP eCLIP19.95■□□□□ 0.78
TMEM116-203ENST00000546537 ERICH3Q5RHP9 1530 aa19.93■□□□□ 0.78
TMEM116-203ENST00000546537 JPH4Q96JJ6 628 aa19.92■□□□□ 0.78
TMEM116-203ENST00000546537 NPM1P06748 294 aaKnown RBP eCLIP19.91■□□□□ 0.78
TMEM116-203ENST00000546537 ADCY10Q96PN6 1610 aa19.89■□□□□ 0.77
TMEM116-203ENST00000546537 TSPOAP1O95153 1857 aa19.88■□□□□ 0.77
TMEM116-203ENST00000546537 BIVM-ERCC5R4GMW8 1640 aa19.88■□□□□ 0.77
TMEM116-203ENST00000546537 TOP2BQ02880 1626 aa19.86■□□□□ 0.77
TMEM116-203ENST00000546537 RUSC2Q8N2Y8 1516 aa19.86■□□□□ 0.77
TMEM116-203ENST00000546537 ADGRL1O94910 1474 aa19.73■□□□□ 0.75
TMEM116-203ENST00000546537 PPRC1Q5VV67 1664 aaKnown RBP19.69■□□□□ 0.74
TMEM116-203ENST00000546537 HECW2Q9P2P5 1572 aa19.68■□□□□ 0.74
TMEM116-203ENST00000546537 KIAA0586Q9BVV6 1533 aa19.66■□□□□ 0.74
TMEM116-203ENST00000546537 GLI2P10070 1586 aa19.64■□□□□ 0.73
TMEM116-203ENST00000546537 ABCC2Q92887 1545 aa19.59■□□□□ 0.73
TMEM116-203ENST00000546537 PLB1Q6P1J6 1458 aa19.58■□□□□ 0.72
TMEM116-203ENST00000546537 PTPRGP23470 1445 aa19.58■□□□□ 0.72
TMEM116-203ENST00000546537 ASXL2Q76L83 1435 aa19.58■□□□□ 0.72
TMEM116-203ENST00000546537 COL17A1Q9UMD9 1497 aaPredicted RBP19.57■□□□□ 0.72
TMEM116-203ENST00000546537 CUL7Q14999 1698 aa19.55■□□□□ 0.72
TMEM116-203ENST00000546537 MAP3K4Q9Y6R4 1608 aa19.52■□□□□ 0.72
TMEM116-203ENST00000546537 TNIKQ9UKE5 1360 aa19.5■□□□□ 0.71
TMEM116-203ENST00000546537 UHRF1BP1LA0JNW5 1464 aa19.49■□□□□ 0.71
TMEM116-203ENST00000546537 IGF1RP08069 1367 aa19.49■□□□□ 0.71
TMEM116-203ENST00000546537 TTBK1Q5TCY1 1321 aaPredicted RBP19.48■□□□□ 0.71
TMEM116-203ENST00000546537 EPRSP07814 1512 aaKnown RBP19.47■□□□□ 0.71
TMEM116-203ENST00000546537 CARMIL2Q6F5E8 1435 aa19.47■□□□□ 0.71
TMEM116-203ENST00000546537 TEX14Q8IWB6 1497 aa19.47■□□□□ 0.71
TMEM116-203ENST00000546537 SUPT5HO00267 1087 aaKnown RBP19.45■□□□□ 0.7
TMEM116-203ENST00000546537 FBXO41Q8TF61 875 aa19.44■□□□□ 0.7
TMEM116-203ENST00000546537 UACAQ9BZF9 1416 aa19.42■□□□□ 0.7
TMEM116-203ENST00000546537 KDM5BQ9UGL1 1544 aa19.41■□□□□ 0.7
TMEM116-203ENST00000546537 KIF27Q86VH2 1401 aa19.41■□□□□ 0.7
TMEM116-203ENST00000546537 IQGAP2Q13576 1575 aa19.39■□□□□ 0.69
TMEM116-203ENST00000546537 ZCCHC11Q5TAX3 1644 aaKnown RBP19.39■□□□□ 0.69
TMEM116-203ENST00000546537 DISP1Q96F81 1524 aa19.35■□□□□ 0.69
TMEM116-203ENST00000546537 CARMIL1Q5VZK9 1371 aa19.34■□□□□ 0.69
TMEM116-203ENST00000546537 KIF21BO75037 1637 aa19.29■□□□□ 0.68
TMEM116-203ENST00000546537 WDR7Q9Y4E6 1490 aa19.28■□□□□ 0.68
TMEM116-203ENST00000546537 CFAP43Q8NDM7 1665 aa19.27■□□□□ 0.68
TMEM116-203ENST00000546537 MAGI3Q5TCQ9 1506 aa19.27■□□□□ 0.68
TMEM116-203ENST00000546537 UGGT2Q9NYU1 1516 aa19.25■□□□□ 0.67
TMEM116-203ENST00000546537 KIAA0556O60303 1618 aa19.23■□□□□ 0.67
TMEM116-203ENST00000546537 CD109Q6YHK3 1445 aa19.23■□□□□ 0.67
TMEM116-203ENST00000546537 ADAMTSL3P82987 1691 aa19.18■□□□□ 0.66
TMEM116-203ENST00000546537 PTPRMP28827 1452 aa19.17■□□□□ 0.66
TMEM116-203ENST00000546537 ARAP3Q8WWN8 1544 aa19.15■□□□□ 0.66
TMEM116-203ENST00000546537 KCNH8Q96L42 1107 aa19.13■□□□□ 0.65
TMEM116-203ENST00000546537 ABCA8O94911 1581 aa19.1■□□□□ 0.65
TMEM116-203ENST00000546537 PCF11O94913 1555 aaKnown RBP19.1■□□□□ 0.65
TMEM116-203ENST00000546537 LMTK3Q96Q04 1460 aa19.1■□□□□ 0.65
TMEM116-203ENST00000546537 RAPGEF2Q9Y4G8 1499 aa19.1■□□□□ 0.65
TMEM116-203ENST00000546537 BCORL1Q5H9F3 1711 aa19.07■□□□□ 0.64
TMEM116-203ENST00000546537 CTTNBP2Q8WZ74 1663 aa19.05■□□□□ 0.64
TMEM116-203ENST00000546537 MADDQ8WXG6 1647 aa19.04■□□□□ 0.64
TMEM116-203ENST00000546537 PHLDB1Q86UU1 1377 aa19.02■□□□□ 0.64
TMEM116-203ENST00000546537 GOLGA3Q08378 1498 aa19.01■□□□□ 0.63
TMEM116-203ENST00000546537 ABCA9Q8IUA7 1624 aa19■□□□□ 0.63
TMEM116-203ENST00000546537 RIMS1Q86UR5 1692 aaKnown RBP18.96■□□□□ 0.63
TMEM116-203ENST00000546537 RAPGEF3O95398 923 aa18.96■□□□□ 0.63
TMEM116-203ENST00000546537 FRMPD1Q5SYB0 1578 aa18.95■□□□□ 0.62
TMEM116-203ENST00000546537 NEO1Q92859 1461 aa18.94■□□□□ 0.62
TMEM116-203ENST00000546537 CERKQ8TCT0 537 aa18.93■□□□□ 0.62
TMEM116-203ENST00000546537 ARID4BQ4LE39 1312 aaPredicted RBP18.93■□□□□ 0.62
TMEM116-203ENST00000546537 ATP10BO94823 1461 aa18.92■□□□□ 0.62
TMEM116-203ENST00000546537 SOCS7O14512 581 aa18.91■□□□□ 0.62
TMEM116-203ENST00000546537 HSPA2P54652 639 aa18.91■□□□□ 0.62
TMEM116-203ENST00000546537 ILDR2Q71H61 639 aa18.91■□□□□ 0.62
TMEM116-203ENST00000546537 ARHGEF40Q8TER5 1519 aa18.88■□□□□ 0.61
TMEM116-203ENST00000546537 DISP3Q9P2K9 1392 aa18.87■□□□□ 0.61
TMEM116-203ENST00000546537 ARID3CA6NKF2 412 aa18.85■□□□□ 0.61
TMEM116-203ENST00000546537 RICTORQ6R327 1708 aa18.84■□□□□ 0.61
TMEM116-203ENST00000546537 FAM9AQ8IZU1 332 aaPredicted RBP18.81■□□□□ 0.6
TMEM116-203ENST00000546537 SIGLEC1Q9BZZ2 1709 aa18.8■□□□□ 0.6
TMEM116-203ENST00000546537 FANCAO15360 1455 aa18.79■□□□□ 0.6
TMEM116-203ENST00000546537 DENND4BO75064 1496 aaPredicted RBP18.78■□□□□ 0.6
TMEM116-203ENST00000546537 POGZQ7Z3K3 1410 aa18.78■□□□□ 0.6
TMEM116-203ENST00000546537 PLPPR3Q6T4P5 718 aa18.77■□□□□ 0.6
TMEM116-203ENST00000546537 RAPGEF6Q8TEU7 1601 aa18.77■□□□□ 0.6
TMEM116-203ENST00000546537 FHOD3Q2V2M9 1422 aa18.76■□□□□ 0.59
TMEM116-203ENST00000546537 FER1L4A9Z1Z3 1794 aa18.76■□□□□ 0.59
TMEM116-203ENST00000546537 PRXQ9BXM0 1461 aa18.76■□□□□ 0.59
TMEM116-203ENST00000546537 TTC37Q6PGP7 1564 aa18.76■□□□□ 0.59
TMEM116-203ENST00000546537 AKNAQ7Z591 1439 aa18.74■□□□□ 0.59
TMEM116-203ENST00000546537 ZMYM4Q5VZL5 1548 aa18.74■□□□□ 0.59
TMEM116-203ENST00000546537 P3H3Q8IVL6 736 aa18.74■□□□□ 0.59
TMEM116-203ENST00000546537 PREX1Q8TCU6 1659 aa18.73■□□□□ 0.59
TMEM116-203ENST00000546537 SPATA31D1Q6ZQQ2 1576 aa18.73■□□□□ 0.59
TMEM116-203ENST00000546537 CFAP74Q9C0B2 1584 aa18.73■□□□□ 0.59
TMEM116-203ENST00000546537 EFCAB5A4FU69 1503 aa18.72■□□□□ 0.59
TMEM116-203ENST00000546537 ZFYVE16Q7Z3T8 1539 aa18.72■□□□□ 0.59
TMEM116-203ENST00000546537 SAMD9Q5K651 1589 aa18.72■□□□□ 0.59
TMEM116-203ENST00000546537 STRCQ7RTU9 1775 aa18.7■□□□□ 0.58
TMEM116-203ENST00000546537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.7■□□□□ 0.58
TMEM116-203ENST00000546537 HNRNPUL2Q1KMD3 747 aaKnown RBP18.7■□□□□ 0.58
TMEM116-203ENST00000546537 YEATS2Q9ULM3 1422 aa18.7■□□□□ 0.58
TMEM116-203ENST00000546537 MAGI2Q86UL8 1455 aa18.69■□□□□ 0.58
TMEM116-203ENST00000546537 NUP153P49790 1475 aaKnown RBP18.68■□□□□ 0.58
TMEM116-203ENST00000546537 MLECQ14165 292 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms