RNA–Protein interactions for RNA: ENST00000546152.1

PRPF19-207, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 5

Gene PRPF19, Length 814 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-207ENST00000546152 JPH4Q96JJ6 628 aa34.35■■■■□ 3.09
PRPF19-207ENST00000546152 PRG4Q92954 1404 aaPredicted RBP34.3■■■■□ 3.08
PRPF19-207ENST00000546152 KIAA0586Q9BVV6 1533 aa34.28■■■■□ 3.08
PRPF19-207ENST00000546152 TRHP20396 242 aaPredicted RBP34.15■■■■□ 3.06
PRPF19-207ENST00000546152 RAPGEF2Q9Y4G8 1499 aa34.11■■■■□ 3.05
PRPF19-207ENST00000546152 IQGAP2Q13576 1575 aa34.01■■■■□ 3.03
PRPF19-207ENST00000546152 PRXQ9BXM0 1461 aa33.93■■■■□ 3.02
PRPF19-207ENST00000546152 CARMIL2Q6F5E8 1435 aa33.89■■■■□ 3.02
PRPF19-207ENST00000546152 ADCY10Q96PN6 1610 aa33.84■■■■□ 3.01
PRPF19-207ENST00000546152 PTPRGP23470 1445 aa33.84■■■■□ 3.01
PRPF19-207ENST00000546152 DISP1Q96F81 1524 aa33.84■■■■□ 3.01
PRPF19-207ENST00000546152 UGGT2Q9NYU1 1516 aa33.84■■■■□ 3.01
PRPF19-207ENST00000546152 TNIKQ9UKE5 1360 aa33.83■■■■□ 3.01
PRPF19-207ENST00000546152 CSRNP3Q8WYN3 585 aa33.79■■■■□ 3
PRPF19-207ENST00000546152 CTTNBP2Q8WZ74 1663 aa33.77■■■■□ 3
PRPF19-207ENST00000546152 NPM1P06748 294 aaKnown RBP eCLIP33.75■■■□□ 2.99
PRPF19-207ENST00000546152 TTBK1Q5TCY1 1321 aaPredicted RBP33.75■■■□□ 2.99
PRPF19-207ENST00000546152 EEA1Q15075 1411 aa33.72■■■□□ 2.99
PRPF19-207ENST00000546152 KIAA0556O60303 1618 aa33.69■■■□□ 2.98
PRPF19-207ENST00000546152 MAPKBP1O60336 1514 aa33.69■■■□□ 2.98
PRPF19-207ENST00000546152 CHIC1Q5VXU3 224 aa33.68■■■□□ 2.98
PRPF19-207ENST00000546152 KIF13AQ9H1H9 1805 aa33.63■■■□□ 2.97
PRPF19-207ENST00000546152 UHRF1BP1LA0JNW5 1464 aa33.61■■■□□ 2.97
PRPF19-207ENST00000546152 UACAQ9BZF9 1416 aa33.61■■■□□ 2.97
PRPF19-207ENST00000546152 ABCC2Q92887 1545 aa33.59■■■□□ 2.97
PRPF19-207ENST00000546152 ABCC10Q5T3U5 1492 aa33.59■■■□□ 2.97
PRPF19-207ENST00000546152 FAM9AQ8IZU1 332 aaPredicted RBP33.59■■■□□ 2.97
PRPF19-207ENST00000546152 GOLGA3Q08378 1498 aa33.57■■■□□ 2.97
PRPF19-207ENST00000546152 FAM69CQ0P6D2 419 aa33.53■■■□□ 2.96
PRPF19-207ENST00000546152 DIP2BQ9P265 1576 aa33.51■■■□□ 2.96
PRPF19-207ENST00000546152 KDM5BQ9UGL1 1544 aa33.45■■■□□ 2.95
PRPF19-207ENST00000546152 ASXL2Q76L83 1435 aa33.43■■■□□ 2.94
PRPF19-207ENST00000546152 PLB1Q6P1J6 1458 aa33.43■■■□□ 2.94
PRPF19-207ENST00000546152 KIF21BO75037 1637 aa33.42■■■□□ 2.94
PRPF19-207ENST00000546152 ABCA8O94911 1581 aa33.37■■■□□ 2.93
PRPF19-207ENST00000546152 ZCCHC11Q5TAX3 1644 aaKnown RBP33.36■■■□□ 2.93
PRPF19-207ENST00000546152 SAMD9Q5K651 1589 aa33.36■■■□□ 2.93
PRPF19-207ENST00000546152 P3H3Q8IVL6 736 aa33.36■■■□□ 2.93
PRPF19-207ENST00000546152 GLI2P10070 1586 aa33.26■■■□□ 2.92
PRPF19-207ENST00000546152 RANGAP1P46060 587 aaPredicted RBP33.24■■■□□ 2.91
PRPF19-207ENST00000546152 EPRSP07814 1512 aaKnown RBP33.23■■■□□ 2.91
PRPF19-207ENST00000546152 TSPOAP1O95153 1857 aa33.2■■■□□ 2.91
PRPF19-207ENST00000546152 WDR7Q9Y4E6 1490 aa33.18■■■□□ 2.9
PRPF19-207ENST00000546152 EHMT2Q96KQ7 1210 aa33.18■■■□□ 2.9
PRPF19-207ENST00000546152 FHOD3Q2V2M9 1422 aa33.15■■■□□ 2.9
PRPF19-207ENST00000546152 UBTFP17480 764 aaKnown RBP33.14■■■□□ 2.9
PRPF19-207ENST00000546152 ATP10BO94823 1461 aa33.12■■■□□ 2.89
PRPF19-207ENST00000546152 PPRC1Q5VV67 1664 aaKnown RBP33.11■■■□□ 2.89
PRPF19-207ENST00000546152 EFCAB5A4FU69 1503 aa33.11■■■□□ 2.89
PRPF19-207ENST00000546152 RAPGEF6Q8TEU7 1601 aa33.1■■■□□ 2.89
PRPF19-207ENST00000546152 MAP3K4Q9Y6R4 1608 aa33.1■■■□□ 2.89
PRPF19-207ENST00000546152 ARID3CA6NKF2 412 aa33.08■■■□□ 2.89
PRPF19-207ENST00000546152 KDM6BO15054 1643 aa33.06■■■□□ 2.88
PRPF19-207ENST00000546152 KCNH8Q96L42 1107 aa33.02■■■□□ 2.88
PRPF19-207ENST00000546152 NUP153P49790 1475 aaKnown RBP33.01■■■□□ 2.88
PRPF19-207ENST00000546152 TEX14Q8IWB6 1497 aa32.94■■■□□ 2.86
PRPF19-207ENST00000546152 ARHGAP35Q9NRY4 1499 aa32.93■■■□□ 2.86
PRPF19-207ENST00000546152 CD109Q6YHK3 1445 aa32.93■■■□□ 2.86
PRPF19-207ENST00000546152 CFAP43Q8NDM7 1665 aa32.92■■■□□ 2.86
PRPF19-207ENST00000546152 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.89■■■□□ 2.86
PRPF19-207ENST00000546152 HNRNPUL2Q1KMD3 747 aaKnown RBP32.89■■■□□ 2.86
PRPF19-207ENST00000546152 MAGI3Q5TCQ9 1506 aa32.88■■■□□ 2.85
PRPF19-207ENST00000546152 COL17A1Q9UMD9 1497 aaPredicted RBP32.88■■■□□ 2.85
PRPF19-207ENST00000546152 FMN1Q68DA7 1419 aa32.82■■■□□ 2.84
PRPF19-207ENST00000546152 ABCA9Q8IUA7 1624 aa32.8■■■□□ 2.84
PRPF19-207ENST00000546152 PLEKHD1A6NEE1 506 aa32.75■■■□□ 2.83
PRPF19-207ENST00000546152 CDK13Q14004 1512 aaKnown RBP32.73■■■□□ 2.83
PRPF19-207ENST00000546152 HECW1Q76N89 1606 aa32.69■■■□□ 2.82
PRPF19-207ENST00000546152 AEBP2Q6ZN18 517 aaPredicted RBP32.68■■■□□ 2.82
PRPF19-207ENST00000546152 ATP1B4Q9UN42 357 aaPredicted RBP32.67■■■□□ 2.82
PRPF19-207ENST00000546152 ARAP3Q8WWN8 1544 aa32.61■■■□□ 2.81
PRPF19-207ENST00000546152 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.6■■■□□ 2.813e-10■■■■□ 20.3
PRPF19-207ENST00000546152 PHLDB1Q86UU1 1377 aa32.59■■■□□ 2.81
PRPF19-207ENST00000546152 CLIP1P30622 1438 aa32.59■■■□□ 2.81
PRPF19-207ENST00000546152 NEO1Q92859 1461 aa32.57■■■□□ 2.8
PRPF19-207ENST00000546152 CASKIN1Q8WXD9 1431 aa32.54■■■□□ 2.8
PRPF19-207ENST00000546152 KDM4FA0A1W2PPD8 638 aa32.54■■■□□ 2.8
PRPF19-207ENST00000546152 LRRIQ1Q96JM4 1722 aa32.54■■■□□ 2.8
PRPF19-207ENST00000546152 TTC37Q6PGP7 1564 aa32.53■■■□□ 2.8
PRPF19-207ENST00000546152 PCF11O94913 1555 aaKnown RBP32.53■■■□□ 2.8
PRPF19-207ENST00000546152 CDK11AQ9UQ88 783 aaPredicted RBP32.51■■■□□ 2.79
PRPF19-207ENST00000546152 TROQ12816 1431 aaPredicted RBP32.45■■■□□ 2.79
PRPF19-207ENST00000546152 FANCAO15360 1455 aa32.44■■■□□ 2.78
PRPF19-207ENST00000546152 RAPGEF3O95398 923 aa32.44■■■□□ 2.78
PRPF19-207ENST00000546152 FYCO1Q9BQS8 1478 aa32.43■■■□□ 2.78
PRPF19-207ENST00000546152 CCDC18Q5T9S5 1454 aa32.42■■■□□ 2.78
PRPF19-207ENST00000546152 PLCH2O75038 1416 aa32.41■■■□□ 2.78
PRPF19-207ENST00000546152 AKNAQ7Z591 1439 aa32.41■■■□□ 2.78
PRPF19-207ENST00000546152 KIF14Q15058 1648 aa32.4■■■□□ 2.78
PRPF19-207ENST00000546152 FRMPD1Q5SYB0 1578 aa32.39■■■□□ 2.78
PRPF19-207ENST00000546152 CFAP74Q9C0B2 1584 aa32.39■■■□□ 2.78
PRPF19-207ENST00000546152 ADGRL1O94910 1474 aa32.38■■■□□ 2.77
PRPF19-207ENST00000546152 CEP162Q5TB80 1403 aa32.36■■■□□ 2.77
PRPF19-207ENST00000546152 DENND4BO75064 1496 aaPredicted RBP32.33■■■□□ 2.77
PRPF19-207ENST00000546152 LOC105371045A0A1W2PR82 267 aa32.32■■■□□ 2.76
PRPF19-207ENST00000546152 MYO5CQ9NQX4 1742 aa32.31■■■□□ 2.76
PRPF19-207ENST00000546152 RICTORQ6R327 1708 aa32.29■■■□□ 2.76
PRPF19-207ENST00000546152 EFCAB2Q5VUJ9 269 aa32.26■■■□□ 2.75
PRPF19-207ENST00000546152 SCAPERQ9BY12 1400 aa32.23■■■□□ 2.75
PRPF19-207ENST00000546152 ARHGAP5Q13017 1502 aa32.2■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms