RNA–Protein interactions for RNA: ENST00000545224.5

SRRM4-203, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-203ENST00000545224 CUL7Q14999 1698 aa18.95■□□□□ 0.62
SRRM4-203ENST00000545224 GRIN2AQ12879 1464 aa18.91■□□□□ 0.62
SRRM4-203ENST00000545224 FAM9AQ8IZU1 332 aaPredicted RBP18.91■□□□□ 0.62
SRRM4-203ENST00000545224 RAPGEF2Q9Y4G8 1499 aa18.87■□□□□ 0.61
SRRM4-203ENST00000545224 NUP160Q12769 1436 aa18.86■□□□□ 0.61
SRRM4-203ENST00000545224 CEP170Q5SW79 1584 aa18.82■□□□□ 0.6
SRRM4-203ENST00000545224 KIF21BO75037 1637 aa18.8■□□□□ 0.6
SRRM4-203ENST00000545224 KIAA0586Q9BVV6 1533 aa18.73■□□□□ 0.59
SRRM4-203ENST00000545224 GOLGA3Q08378 1498 aa18.69■□□□□ 0.58
SRRM4-203ENST00000545224 SHROOM2Q13796 1616 aa18.67■□□□□ 0.58
SRRM4-203ENST00000545224 JPH4Q96JJ6 628 aa18.65■□□□□ 0.58
SRRM4-203ENST00000545224 CTTNBP2Q8WZ74 1663 aa18.63■□□□□ 0.57
SRRM4-203ENST00000545224 IQGAP2Q13576 1575 aa18.62■□□□□ 0.57
SRRM4-203ENST00000545224 ERCC6L2Q5T890 1561 aa18.61■□□□□ 0.57
SRRM4-203ENST00000545224 LOC105371045A0A1W2PR82 267 aa18.6■□□□□ 0.57
SRRM4-203ENST00000545224 EHMT2Q96KQ7 1210 aa18.6■□□□□ 0.57
SRRM4-203ENST00000545224 UGGT2Q9NYU1 1516 aa18.59■□□□□ 0.57
SRRM4-203ENST00000545224 UBTFP17480 764 aaKnown RBP18.58■□□□□ 0.56
SRRM4-203ENST00000545224 KIF13AQ9H1H9 1805 aa18.57■□□□□ 0.56
SRRM4-203ENST00000545224 TNIKQ9UKE5 1360 aa18.56■□□□□ 0.56
SRRM4-203ENST00000545224 PRG4Q92954 1404 aaPredicted RBP18.56■□□□□ 0.56
SRRM4-203ENST00000545224 DISP1Q96F81 1524 aa18.54■□□□□ 0.56
SRRM4-203ENST00000545224 SAMD9Q5K651 1589 aa18.47■□□□□ 0.55
SRRM4-203ENST00000545224 KIAA0556O60303 1618 aa18.46■□□□□ 0.55
SRRM4-203ENST00000545224 NPM1P06748 294 aaKnown RBP eCLIP18.46■□□□□ 0.55
SRRM4-203ENST00000545224 CARMIL2Q6F5E8 1435 aa18.45■□□□□ 0.54
SRRM4-203ENST00000545224 ARHGAP35Q9NRY4 1499 aa18.43■□□□□ 0.54
SRRM4-203ENST00000545224 FAM69CQ0P6D2 419 aa18.42■□□□□ 0.54
SRRM4-203ENST00000545224 EFCAB5A4FU69 1503 aa18.4■□□□□ 0.54
SRRM4-203ENST00000545224 RANGAP1P46060 587 aaPredicted RBP18.39■□□□□ 0.53
SRRM4-203ENST00000545224 P3H3Q8IVL6 736 aa18.38■□□□□ 0.53
SRRM4-203ENST00000545224 ABCC10Q5T3U5 1492 aa18.38■□□□□ 0.53
SRRM4-203ENST00000545224 PTPRGP23470 1445 aa18.37■□□□□ 0.53
SRRM4-203ENST00000545224 CEP162Q5TB80 1403 aa18.37■□□□□ 0.53
SRRM4-203ENST00000545224 CLIP1P30622 1438 aa18.36■□□□□ 0.53
SRRM4-203ENST00000545224 FHOD3Q2V2M9 1422 aa18.35■□□□□ 0.53
SRRM4-203ENST00000545224 MAPKBP1O60336 1514 aa18.34■□□□□ 0.53
SRRM4-203ENST00000545224 TSPOAP1O95153 1857 aa18.31■□□□□ 0.52
SRRM4-203ENST00000545224 DIP2BQ9P265 1576 aa18.3■□□□□ 0.52
SRRM4-203ENST00000545224 ABCA8O94911 1581 aa18.28■□□□□ 0.52
SRRM4-203ENST00000545224 ADCY10Q96PN6 1610 aa18.27■□□□□ 0.52
SRRM4-203ENST00000545224 UACAQ9BZF9 1416 aa18.27■□□□□ 0.52
SRRM4-203ENST00000545224 KDM6BO15054 1643 aa18.27■□□□□ 0.51
SRRM4-203ENST00000545224 UHRF1BP1LA0JNW5 1464 aa18.26■□□□□ 0.51
SRRM4-203ENST00000545224 PLB1Q6P1J6 1458 aa18.26■□□□□ 0.51
SRRM4-203ENST00000545224 TTBK1Q5TCY1 1321 aaPredicted RBP18.26■□□□□ 0.51
SRRM4-203ENST00000545224 KDM4FA0A1W2PPD8 638 aa18.25■□□□□ 0.51
SRRM4-203ENST00000545224 ABCC2Q92887 1545 aa18.23■□□□□ 0.51
SRRM4-203ENST00000545224 FMN1Q68DA7 1419 aa18.23■□□□□ 0.51
SRRM4-203ENST00000545224 RAPGEF6Q8TEU7 1601 aa18.19■□□□□ 0.5
SRRM4-203ENST00000545224 NUP153P49790 1475 aaKnown RBP18.18■□□□□ 0.5
SRRM4-203ENST00000545224 KDM5BQ9UGL1 1544 aa18.18■□□□□ 0.5
SRRM4-203ENST00000545224 CASKIN1Q8WXD9 1431 aa18.16■□□□□ 0.5
SRRM4-203ENST00000545224 ATP10BO94823 1461 aa18.14■□□□□ 0.5
SRRM4-203ENST00000545224 VPS8Q8N3P4 1428 aa18.14■□□□□ 0.49
SRRM4-203ENST00000545224 PCF11O94913 1555 aaKnown RBP18.13■□□□□ 0.49
SRRM4-203ENST00000545224 FYCO1Q9BQS8 1478 aa18.1■□□□□ 0.49
SRRM4-203ENST00000545224 LRRIQ1Q96JM4 1722 aa18.09■□□□□ 0.49
SRRM4-203ENST00000545224 ZCCHC11Q5TAX3 1644 aaKnown RBP18.09■□□□□ 0.49
SRRM4-203ENST00000545224 HECW1Q76N89 1606 aa18.09■□□□□ 0.49
SRRM4-203ENST00000545224 EPRSP07814 1512 aaKnown RBP18.08■□□□□ 0.49
SRRM4-203ENST00000545224 ILDR1Q86SU0 546 aaPredicted RBP18.08■□□□□ 0.48
SRRM4-203ENST00000545224 GLI2P10070 1586 aa18.07■□□□□ 0.48
SRRM4-203ENST00000545224 CDK13Q14004 1512 aaKnown RBP18.05■□□□□ 0.48
SRRM4-203ENST00000545224 ARID3CA6NKF2 412 aa18.05■□□□□ 0.48
SRRM4-203ENST00000545224 PPRC1Q5VV67 1664 aaKnown RBP18.04■□□□□ 0.48
SRRM4-203ENST00000545224 ASXL2Q76L83 1435 aa18.04■□□□□ 0.48
SRRM4-203ENST00000545224 ATP1B4Q9UN42 357 aaPredicted RBP18.01■□□□□ 0.47
SRRM4-203ENST00000545224 CCDC18Q5T9S5 1454 aa18■□□□□ 0.47
SRRM4-203ENST00000545224 ADGRL1O94910 1474 aa17.98■□□□□ 0.47
SRRM4-203ENST00000545224 MAGI3Q5TCQ9 1506 aa17.98■□□□□ 0.47
SRRM4-203ENST00000545224 WDR7Q9Y4E6 1490 aa17.97■□□□□ 0.47
SRRM4-203ENST00000545224 MAP3K1Q13233 1512 aa17.97■□□□□ 0.47
SRRM4-203ENST00000545224 PLEKHD1A6NEE1 506 aa17.95■□□□□ 0.46
SRRM4-203ENST00000545224 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.95■□□□□ 0.46
SRRM4-203ENST00000545224 HNRNPUL2Q1KMD3 747 aaKnown RBP17.95■□□□□ 0.46
SRRM4-203ENST00000545224 TEX14Q8IWB6 1497 aa17.95■□□□□ 0.46
SRRM4-203ENST00000545224 MAP3K4Q9Y6R4 1608 aa17.94■□□□□ 0.46
SRRM4-203ENST00000545224 TIAM1Q13009 1591 aa17.93■□□□□ 0.46
SRRM4-203ENST00000545224 TROQ12816 1431 aaPredicted RBP17.92■□□□□ 0.46
SRRM4-203ENST00000545224 COL17A1Q9UMD9 1497 aaPredicted RBP17.92■□□□□ 0.46
SRRM4-203ENST00000545224 CFAP43Q8NDM7 1665 aa17.92■□□□□ 0.46
SRRM4-203ENST00000545224 CDK11AQ9UQ88 783 aaPredicted RBP17.91■□□□□ 0.46
SRRM4-203ENST00000545224 KANK4Q5T7N3 995 aaPredicted RBP17.9■□□□□ 0.46
SRRM4-203ENST00000545224 KCNH8Q96L42 1107 aa17.88■□□□□ 0.45
SRRM4-203ENST00000545224 LRRC9Q6ZRR7 1453 aa17.88■□□□□ 0.45
SRRM4-203ENST00000545224 HECW2Q9P2P5 1572 aa17.86■□□□□ 0.45
SRRM4-203ENST00000545224 KIF14Q15058 1648 aa17.84■□□□□ 0.45
SRRM4-203ENST00000545224 ABCA9Q8IUA7 1624 aa17.84■□□□□ 0.45
SRRM4-203ENST00000545224 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.84■□□□□ 0.45
SRRM4-203ENST00000545224 EHBP1L1Q8N3D4 1523 aa17.83■□□□□ 0.45
SRRM4-203ENST00000545224 MTUS2Q5JR59 1369 aa17.83■□□□□ 0.45
SRRM4-203ENST00000545224 APLP2Q06481 763 aa17.8■□□□□ 0.44
SRRM4-203ENST00000545224 TTC37Q6PGP7 1564 aa17.79■□□□□ 0.44
SRRM4-203ENST00000545224 CD109Q6YHK3 1445 aa17.77■□□□□ 0.44
SRRM4-203ENST00000545224 NCOA2Q15596 1464 aa17.76■□□□□ 0.43
SRRM4-203ENST00000545224 PLCH2O75038 1416 aa17.75■□□□□ 0.43
SRRM4-203ENST00000545224 GPATCH8Q9UKJ3 1502 aaKnown RBP17.74■□□□□ 0.43
SRRM4-203ENST00000545224 SUPT6HQ7KZ85 1726 aaKnown RBP17.74■□□□□ 0.43
SRRM4-203ENST00000545224 ARAP3Q8WWN8 1544 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms