RNA–Protein interactions for RNA: ENST00000544613.5

CCDC189-208, Transcript of coiled-coil domain containing 189, humanhuman

TSL 3

Gene CCDC189, Length 555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-208ENST00000544613 TTBK1Q5TCY1 1321 aaPredicted RBP18.37■□□□□ 0.53
CCDC189-208ENST00000544613 GRIN2BQ13224 1484 aa18.36■□□□□ 0.53
CCDC189-208ENST00000544613 CCER1Q8TC90 406 aaPredicted RBP18.35■□□□□ 0.53
CCDC189-208ENST00000544613 FMN1Q68DA7 1419 aa18.33■□□□□ 0.53
CCDC189-208ENST00000544613 FYCO1Q9BQS8 1478 aa18.33■□□□□ 0.52
CCDC189-208ENST00000544613 RRBP1Q9P2E9 1410 aaKnown RBP18.32■□□□□ 0.52
CCDC189-208ENST00000544613 TIAM1Q13009 1591 aa18.32■□□□□ 0.52
CCDC189-208ENST00000544613 ERCC6Q03468 1493 aa18.31■□□□□ 0.52
CCDC189-208ENST00000544613 CASKIN1Q8WXD9 1431 aa18.31■□□□□ 0.52
CCDC189-208ENST00000544613 PBRM1Q86U86 1689 aa18.3■□□□□ 0.52
CCDC189-208ENST00000544613 ADAMTS12P58397 1594 aa18.29■□□□□ 0.52
CCDC189-208ENST00000544613 KANK4Q5T7N3 995 aaPredicted RBP18.28■□□□□ 0.52
CCDC189-208ENST00000544613 SAMD9Q5K651 1589 aa18.28■□□□□ 0.52
CCDC189-208ENST00000544613 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.27■□□□□ 0.52
CCDC189-208ENST00000544613 LRRC9Q6ZRR7 1453 aa18.26■□□□□ 0.51
CCDC189-208ENST00000544613 CFAP43Q8NDM7 1665 aa18.24■□□□□ 0.51
CCDC189-208ENST00000544613 FHOD3Q2V2M9 1422 aa18.23■□□□□ 0.51
CCDC189-208ENST00000544613 PCF11O94913 1555 aaKnown RBP18.22■□□□□ 0.51
CCDC189-208ENST00000544613 THOC2Q8NI27 1593 aaKnown RBP18.22■□□□□ 0.51
CCDC189-208ENST00000544613 CCNB3Q8WWL7 1395 aa18.22■□□□□ 0.51
CCDC189-208ENST00000544613 HNRNPUL2Q1KMD3 747 aaKnown RBP18.19■□□□□ 0.5
CCDC189-208ENST00000544613 IQGAP2Q13576 1575 aa18.18■□□□□ 0.5
CCDC189-208ENST00000544613 MAGI1Q96QZ7 1491 aaPredicted RBP18.18■□□□□ 0.5
CCDC189-208ENST00000544613 CLSPNQ9HAW4 1339 aa18.18■□□□□ 0.5
CCDC189-208ENST00000544613 SNAPC4Q5SXM2 1469 aa18.17■□□□□ 0.5
CCDC189-208ENST00000544613 ZNF608Q9ULD9 1512 aaPredicted RBP18.16■□□□□ 0.5
CCDC189-208ENST00000544613 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.16■□□□□ 0.5
CCDC189-208ENST00000544613 UGGT2Q9NYU1 1516 aa18.15■□□□□ 0.5
CCDC189-208ENST00000544613 P3H3Q8IVL6 736 aa18.15■□□□□ 0.5
CCDC189-208ENST00000544613 KIAA0586Q9BVV6 1533 aa18.14■□□□□ 0.49
CCDC189-208ENST00000544613 EIF4G3O43432 1585 aaKnown RBP18.13■□□□□ 0.49
CCDC189-208ENST00000544613 CCDC18Q5T9S5 1454 aa18.11■□□□□ 0.49
CCDC189-208ENST00000544613 GRIN2AQ12879 1464 aa18.1■□□□□ 0.49
CCDC189-208ENST00000544613 SYNJ2O15056 1496 aa18.08■□□□□ 0.49
CCDC189-208ENST00000544613 PHLDB1Q86UU1 1377 aa18.05■□□□□ 0.48
CCDC189-208ENST00000544613 ATP1B4Q9UN42 357 aaPredicted RBP18.05■□□□□ 0.48
CCDC189-208ENST00000544613 HECW1Q76N89 1606 aa18.05■□□□□ 0.48
CCDC189-208ENST00000544613 MTUS2Q5JR59 1369 aa18.04■□□□□ 0.48
CCDC189-208ENST00000544613 EHBP1L1Q8N3D4 1523 aa18.03■□□□□ 0.48
CCDC189-208ENST00000544613 CHMP7Q8WUX9 453 aaPredicted RBP18■□□□□ 0.47
CCDC189-208ENST00000544613 NUP160Q12769 1436 aa17.98■□□□□ 0.47
CCDC189-208ENST00000544613 KIAA0556O60303 1618 aa17.98■□□□□ 0.47
CCDC189-208ENST00000544613 DHX57Q6P158 1386 aaKnown RBP17.97■□□□□ 0.47
CCDC189-208ENST00000544613 DISP1Q96F81 1524 aa17.96■□□□□ 0.47
CCDC189-208ENST00000544613 FGD6Q6ZV73 1430 aa17.96■□□□□ 0.47
CCDC189-208ENST00000544613 SUPT6HQ7KZ85 1726 aaKnown RBP17.95■□□□□ 0.46
CCDC189-208ENST00000544613 SETD5Q9C0A6 1442 aa17.94■□□□□ 0.46
CCDC189-208ENST00000544613 ARHGEF11O15085 1522 aa17.93■□□□□ 0.46
CCDC189-208ENST00000544613 EPRSP07814 1512 aaKnown RBP17.93■□□□□ 0.46
CCDC189-208ENST00000544613 MYOM3Q5VTT5 1437 aa17.93■□□□□ 0.46
CCDC189-208ENST00000544613 CARMIL2Q6F5E8 1435 aa17.93■□□□□ 0.46
CCDC189-208ENST00000544613 NCOA2Q15596 1464 aa17.93■□□□□ 0.46
CCDC189-208ENST00000544613 FAM50AQ14320 339 aaKnown RBP17.91■□□□□ 0.46
CCDC189-208ENST00000544613 CEP170Q5SW79 1584 aa17.91■□□□□ 0.46
CCDC189-208ENST00000544613 LRRIQ1Q96JM4 1722 aa17.89■□□□□ 0.45
CCDC189-208ENST00000544613 CDK11AQ9UQ88 783 aaPredicted RBP17.88■□□□□ 0.45
CCDC189-208ENST00000544613 RAB3GAP2Q9H2M9 1393 aa17.88■□□□□ 0.45
CCDC189-208ENST00000544613 MIA2Q96PC5 1412 aa17.87■□□□□ 0.45
CCDC189-208ENST00000544613 TCOF1Q13428 1488 aaKnown RBP17.86■□□□□ 0.45
CCDC189-208ENST00000544613 ACIN1Q9UKV3 1341 aaKnown RBP17.85■□□□□ 0.45
CCDC189-208ENST00000544613 RAPGEF6Q8TEU7 1601 aa17.84■□□□□ 0.45
CCDC189-208ENST00000544613 JPH4Q96JJ6 628 aa17.84■□□□□ 0.45
CCDC189-208ENST00000544613 ITGAEP38570 1179 aa17.83■□□□□ 0.44
CCDC189-208ENST00000544613 ZNF316A6NFI3 1004 aaPredicted RBP17.82■□□□□ 0.44
CCDC189-208ENST00000544613 MAGI3Q5TCQ9 1506 aa17.82■□□□□ 0.44
CCDC189-208ENST00000544613 NUP153P49790 1475 aaKnown RBP17.81■□□□□ 0.44
CCDC189-208ENST00000544613 FBLN2P98095 1184 aa17.8■□□□□ 0.44
CCDC189-208ENST00000544613 HFM1A2PYH4 1435 aa17.8■□□□□ 0.44
CCDC189-208ENST00000544613 AKNAQ7Z591 1439 aa17.79■□□□□ 0.44
CCDC189-208ENST00000544613 PTPN23Q9H3S7 1636 aa17.79■□□□□ 0.44
CCDC189-208ENST00000544613 CDK13Q14004 1512 aaKnown RBP17.78■□□□□ 0.44
CCDC189-208ENST00000544613 TIMELESSQ9UNS1 1208 aa17.78■□□□□ 0.44
CCDC189-208ENST00000544613 TROQ12816 1431 aaPredicted RBP17.74■□□□□ 0.43
CCDC189-208ENST00000544613 ABCA8O94911 1581 aa17.71■□□□□ 0.43
CCDC189-208ENST00000544613 DIEXFQ68CQ4 756 aaKnown RBP17.71■□□□□ 0.43
CCDC189-208ENST00000544613 MAPKBP1O60336 1514 aa17.7■□□□□ 0.42
CCDC189-208ENST00000544613 NAIPQ13075 1403 aa17.69■□□□□ 0.42
CCDC189-208ENST00000544613 UACAQ9BZF9 1416 aa17.69■□□□□ 0.42
CCDC189-208ENST00000544613 PTPRKQ15262 1439 aa17.68■□□□□ 0.42
CCDC189-208ENST00000544613 ADCY10Q96PN6 1610 aa17.68■□□□□ 0.42
CCDC189-208ENST00000544613 PLB1Q6P1J6 1458 aa17.68■□□□□ 0.42
CCDC189-208ENST00000544613 ROCK1Q13464 1354 aa17.67■□□□□ 0.42
CCDC189-208ENST00000544613 PRG4Q92954 1404 aaPredicted RBP17.66■□□□□ 0.42
CCDC189-208ENST00000544613 SHROOM2Q13796 1616 aa17.65■□□□□ 0.42
CCDC189-208ENST00000544613 PTPRGP23470 1445 aa17.64■□□□□ 0.42
CCDC189-208ENST00000544613 PLEKHD1A6NEE1 506 aa17.63■□□□□ 0.41
CCDC189-208ENST00000544613 ITSN2Q9NZM3 1697 aa17.63■□□□□ 0.41
CCDC189-208ENST00000544613 GCC2Q8IWJ2 1684 aa17.61■□□□□ 0.41
CCDC189-208ENST00000544613 CHD1O14646 1710 aa17.61■□□□□ 0.41
CCDC189-208ENST00000544613 ATP10BO94823 1461 aa17.6■□□□□ 0.41
CCDC189-208ENST00000544613 DAPK1P53355 1430 aa17.59■□□□□ 0.41
CCDC189-208ENST00000544613 DNMT1P26358 1616 aaKnown RBP17.58■□□□□ 0.41
CCDC189-208ENST00000544613 GPATCH8Q9UKJ3 1502 aaKnown RBP17.57■□□□□ 0.4
CCDC189-208ENST00000544613 ARID3CA6NKF2 412 aa17.56■□□□□ 0.4
CCDC189-208ENST00000544613 CFDP1Q9UEE9 299 aaPredicted RBP17.56■□□□□ 0.4
CCDC189-208ENST00000544613 KIF14Q15058 1648 aa17.56■□□□□ 0.4
CCDC189-208ENST00000544613 ABCC5O15440 1437 aa17.55■□□□□ 0.4
CCDC189-208ENST00000544613 CAMSAP2Q08AD1 1489 aa17.53■□□□□ 0.4
CCDC189-208ENST00000544613 ABCC10Q5T3U5 1492 aa17.53■□□□□ 0.4
CCDC189-208ENST00000544613 CLASP1Q7Z460 1538 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms