RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 PBRM1Q86U86 1689 aa21.14■□□□□ 0.97
HCFC2-202ENST00000544223 ATP1B4Q9UN42 357 aaPredicted RBP21.13■□□□□ 0.97
HCFC2-202ENST00000544223 IFT140Q96RY7 1462 aa21.1■□□□□ 0.97
HCFC2-202ENST00000544223 FHOD3Q2V2M9 1422 aa21.09■□□□□ 0.97
HCFC2-202ENST00000544223 EIF4G3O43432 1585 aaKnown RBP21.06■□□□□ 0.96
HCFC2-202ENST00000544223 CTTNBP2Q8WZ74 1663 aa21.06■□□□□ 0.96
HCFC2-202ENST00000544223 FBLN2P98095 1184 aa21.05■□□□□ 0.96
HCFC2-202ENST00000544223 GRIN2BQ13224 1484 aa21.04■□□□□ 0.96
HCFC2-202ENST00000544223 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.03■□□□□ 0.96
HCFC2-202ENST00000544223 SNAPC4Q5SXM2 1469 aa21.02■□□□□ 0.95
HCFC2-202ENST00000544223 HNRNPUL2Q1KMD3 747 aaKnown RBP21.01■□□□□ 0.95
HCFC2-202ENST00000544223 ADAMTS12P58397 1594 aa21■□□□□ 0.95
HCFC2-202ENST00000544223 FHAD1B1AJZ9 1412 aa21■□□□□ 0.95
HCFC2-202ENST00000544223 PCF11O94913 1555 aaKnown RBP20.92■□□□□ 0.94
HCFC2-202ENST00000544223 ARID3CA6NKF2 412 aa20.92■□□□□ 0.94
HCFC2-202ENST00000544223 CHMP7Q8WUX9 453 aaPredicted RBP20.91■□□□□ 0.94
HCFC2-202ENST00000544223 EFCAB5A4FU69 1503 aa20.84■□□□□ 0.93
HCFC2-202ENST00000544223 GRIN2AQ12879 1464 aa20.84■□□□□ 0.93
HCFC2-202ENST00000544223 IQGAP2Q13576 1575 aa20.84■□□□□ 0.93
HCFC2-202ENST00000544223 ITGAEP38570 1179 aa20.83■□□□□ 0.92
HCFC2-202ENST00000544223 SAMD9Q5K651 1589 aa20.83■□□□□ 0.92
HCFC2-202ENST00000544223 CCER1Q8TC90 406 aaPredicted RBP20.82■□□□□ 0.92
HCFC2-202ENST00000544223 TIAM1Q13009 1591 aa20.82■□□□□ 0.92
HCFC2-202ENST00000544223 CEP170Q5SW79 1584 aa20.77■□□□□ 0.92
HCFC2-202ENST00000544223 MAGI1Q96QZ7 1491 aaPredicted RBP20.77■□□□□ 0.92
HCFC2-202ENST00000544223 SYNJ2O15056 1496 aa20.76■□□□□ 0.91
HCFC2-202ENST00000544223 LRRIQ1Q96JM4 1722 aa20.76■□□□□ 0.91
HCFC2-202ENST00000544223 CASKIN1Q8WXD9 1431 aa20.76■□□□□ 0.91
HCFC2-202ENST00000544223 LRRC9Q6ZRR7 1453 aa20.75■□□□□ 0.91
HCFC2-202ENST00000544223 FMN1Q68DA7 1419 aa20.75■□□□□ 0.91
HCFC2-202ENST00000544223 FYCO1Q9BQS8 1478 aa20.73■□□□□ 0.91
HCFC2-202ENST00000544223 PHLDB1Q86UU1 1377 aa20.72■□□□□ 0.91
HCFC2-202ENST00000544223 KIAA0586Q9BVV6 1533 aa20.71■□□□□ 0.91
HCFC2-202ENST00000544223 CFAP43Q8NDM7 1665 aa20.69■□□□□ 0.9
HCFC2-202ENST00000544223 DISP1Q96F81 1524 aa20.69■□□□□ 0.9
HCFC2-202ENST00000544223 FAM50AQ14320 339 aaKnown RBP20.66■□□□□ 0.9
HCFC2-202ENST00000544223 JPH4Q96JJ6 628 aa20.65■□□□□ 0.9
HCFC2-202ENST00000544223 UGGT2Q9NYU1 1516 aa20.65■□□□□ 0.9
HCFC2-202ENST00000544223 CCNB3Q8WWL7 1395 aa20.64■□□□□ 0.9
HCFC2-202ENST00000544223 CDK13Q14004 1512 aaKnown RBP20.63■□□□□ 0.89
HCFC2-202ENST00000544223 MAP3K1Q13233 1512 aa20.63■□□□□ 0.89
HCFC2-202ENST00000544223 KIAA0556O60303 1618 aa20.63■□□□□ 0.89
HCFC2-202ENST00000544223 MTUS2Q5JR59 1369 aa20.63■□□□□ 0.89
HCFC2-202ENST00000544223 RRBP1Q9P2E9 1410 aaKnown RBP20.62■□□□□ 0.89
HCFC2-202ENST00000544223 CHD1O14646 1710 aa20.61■□□□□ 0.89
HCFC2-202ENST00000544223 MAGI3Q5TCQ9 1506 aa20.6■□□□□ 0.89
HCFC2-202ENST00000544223 NUP160Q12769 1436 aa20.6■□□□□ 0.89
HCFC2-202ENST00000544223 ZEB1P37275 1124 aaPredicted RBP20.56■□□□□ 0.88
HCFC2-202ENST00000544223 PLB1Q6P1J6 1458 aa20.55■□□□□ 0.88
HCFC2-202ENST00000544223 EPRSP07814 1512 aaKnown RBP20.54■□□□□ 0.88
HCFC2-202ENST00000544223 HECW1Q76N89 1606 aa20.51■□□□□ 0.87
HCFC2-202ENST00000544223 NUP153P49790 1475 aaKnown RBP20.49■□□□□ 0.87
HCFC2-202ENST00000544223 NCOA2Q15596 1464 aa20.49■□□□□ 0.87
HCFC2-202ENST00000544223 PRG4Q92954 1404 aaPredicted RBP20.48■□□□□ 0.87
HCFC2-202ENST00000544223 RAPGEF6Q8TEU7 1601 aa20.45■□□□□ 0.86
HCFC2-202ENST00000544223 CARMIL2Q6F5E8 1435 aa20.45■□□□□ 0.86
HCFC2-202ENST00000544223 ERCC6L2Q5T890 1561 aa20.44■□□□□ 0.86
HCFC2-202ENST00000544223 FGD6Q6ZV73 1430 aa20.43■□□□□ 0.86
HCFC2-202ENST00000544223 CCDC18Q5T9S5 1454 aa20.43■□□□□ 0.86
HCFC2-202ENST00000544223 SUPT6HQ7KZ85 1726 aaKnown RBP20.41■□□□□ 0.86
HCFC2-202ENST00000544223 EHBP1L1Q8N3D4 1523 aa20.41■□□□□ 0.86
HCFC2-202ENST00000544223 RAB3GAP2Q9H2M9 1393 aa20.38■□□□□ 0.85
HCFC2-202ENST00000544223 MYOM3Q5VTT5 1437 aa20.37■□□□□ 0.85
HCFC2-202ENST00000544223 CHIC2Q9UKJ5 165 aa20.37■□□□□ 0.85
HCFC2-202ENST00000544223 PTPRKQ15262 1439 aa20.37■□□□□ 0.85
HCFC2-202ENST00000544223 DHX57Q6P158 1386 aaKnown RBP20.35■□□□□ 0.85
HCFC2-202ENST00000544223 ZNF644Q9H582 1327 aaPredicted RBP20.35■□□□□ 0.85
HCFC2-202ENST00000544223 PTPRGP23470 1445 aa20.34■□□□□ 0.85
HCFC2-202ENST00000544223 ARHGEF11O15085 1522 aa20.31■□□□□ 0.84
HCFC2-202ENST00000544223 PTPN23Q9H3S7 1636 aa20.3■□□□□ 0.84
HCFC2-202ENST00000544223 SETD5Q9C0A6 1442 aa20.28■□□□□ 0.84
HCFC2-202ENST00000544223 KIF14Q15058 1648 aa20.28■□□□□ 0.84
HCFC2-202ENST00000544223 ZNF777Q9ULD5 760 aaPredicted RBP20.28■□□□□ 0.84
HCFC2-202ENST00000544223 ABCA8O94911 1581 aa20.28■□□□□ 0.84
HCFC2-202ENST00000544223 RRP7BPQ9NSQ0 103 aa20.27■□□□□ 0.84
HCFC2-202ENST00000544223 ATP10BO94823 1461 aa20.27■□□□□ 0.84
HCFC2-202ENST00000544223 CDK11AQ9UQ88 783 aaPredicted RBP20.26■□□□□ 0.83
HCFC2-202ENST00000544223 SHROOM2Q13796 1616 aa20.25■□□□□ 0.83
HCFC2-202ENST00000544223 PLEKHD1A6NEE1 506 aa20.22■□□□□ 0.83
HCFC2-202ENST00000544223 TROQ12816 1431 aaPredicted RBP20.22■□□□□ 0.83
HCFC2-202ENST00000544223 CLASP1Q7Z460 1538 aa20.22■□□□□ 0.83
HCFC2-202ENST00000544223 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.19■□□□□ 0.82
HCFC2-202ENST00000544223 CFDP1Q9UEE9 299 aaPredicted RBP20.18■□□□□ 0.82
HCFC2-202ENST00000544223 UACAQ9BZF9 1416 aa20.17■□□□□ 0.82
HCFC2-202ENST00000544223 KCNH8Q96L42 1107 aa20.16■□□□□ 0.82
HCFC2-202ENST00000544223 SIN3AQ96ST3 1273 aa20.16■□□□□ 0.82
HCFC2-202ENST00000544223 NEUROD1Q13562 356 aa20.15■□□□□ 0.82
HCFC2-202ENST00000544223 MAPKBP1O60336 1514 aa20.13■□□□□ 0.81
HCFC2-202ENST00000544223 GPATCH8Q9UKJ3 1502 aaKnown RBP20.13■□□□□ 0.81
HCFC2-202ENST00000544223 TCOF1Q13428 1488 aaKnown RBP20.13■□□□□ 0.81
HCFC2-202ENST00000544223 NAIPQ13075 1403 aa20.13■□□□□ 0.81
HCFC2-202ENST00000544223 KDM6BO15054 1643 aa20.11■□□□□ 0.81
HCFC2-202ENST00000544223 MIA2Q96PC5 1412 aa20.11■□□□□ 0.81
HCFC2-202ENST00000544223 HFM1A2PYH4 1435 aa20.1■□□□□ 0.81
HCFC2-202ENST00000544223 OSCARQ8IYS5 282 aa20.08■□□□□ 0.8
HCFC2-202ENST00000544223 CAMSAP2Q08AD1 1489 aa20.07■□□□□ 0.8
HCFC2-202ENST00000544223 ABCC5O15440 1437 aa20.07■□□□□ 0.8
HCFC2-202ENST00000544223 DAPK1P53355 1430 aa20.07■□□□□ 0.8
HCFC2-202ENST00000544223 CDC42BPAQ5VT25 1732 aa20.06■□□□□ 0.8
HCFC2-202ENST00000544223 ADCY10Q96PN6 1610 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms