RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 B4GALNT3Q6L9W6 998 aa11.78□□□□□ -0.52
ABCB1-210ENST00000543898 ANP32AP39687 249 aaKnown RBP11.77□□□□□ -0.53
ABCB1-210ENST00000543898 PODXL2Q9NZ53 605 aa11.76□□□□□ -0.53
ABCB1-210ENST00000543898 CCER2I3L3R5 266 aa11.76□□□□□ -0.53
ABCB1-210ENST00000543898 MRS2Q9HD23 443 aa11.75□□□□□ -0.53
ABCB1-210ENST00000543898 DEKP35659 375 aaKnown RBP11.74□□□□□ -0.53
ABCB1-210ENST00000543898 ZNF326Q5BKZ1 582 aaKnown RBP11.74□□□□□ -0.53
ABCB1-210ENST00000543898 CHIC2Q9UKJ5 165 aa11.72□□□□□ -0.53
ABCB1-210ENST00000543898 MYT1LQ9UL68 1186 aa11.72□□□□□ -0.53
ABCB1-210ENST00000543898 CCDC136Q96JN2 1154 aa11.72□□□□□ -0.53
ABCB1-210ENST00000543898 PPP4R2Q9NY27 417 aa11.72□□□□□ -0.53
ABCB1-210ENST00000543898 SMARCA2P51531 1590 aa11.71□□□□□ -0.53
ABCB1-210ENST00000543898 PLEKHG5O94827 1062 aa11.71□□□□□ -0.54
ABCB1-210ENST00000543898 PPP1R15AO75807 674 aaPredicted RBP11.7□□□□□ -0.54
ABCB1-210ENST00000543898 ZBTB47Q9UFB7 747 aaPredicted RBP11.7□□□□□ -0.54
ABCB1-210ENST00000543898 SETD5Q9C0A6 1442 aa11.7□□□□□ -0.54
ABCB1-210ENST00000543898 ARID3CA6NKF2 412 aa11.69□□□□□ -0.54
ABCB1-210ENST00000543898 ANO8Q9HCE9 1232 aaPredicted RBP11.68□□□□□ -0.54
ABCB1-210ENST00000543898 KIF21BO75037 1637 aa11.67□□□□□ -0.54
ABCB1-210ENST00000543898 NOP58Q9Y2X3 529 aaKnown RBP11.67□□□□□ -0.54
ABCB1-210ENST00000543898 SALL2Q9Y467 1007 aaPredicted RBP11.67□□□□□ -0.54
ABCB1-210ENST00000543898 MSH5O43196 834 aa11.67□□□□□ -0.54
ABCB1-210ENST00000543898 RTN4Q9NQC3 1192 aaKnown RBP11.66□□□□□ -0.54
ABCB1-210ENST00000543898 RRP7BPQ9NSQ0 103 aa11.66□□□□□ -0.54
ABCB1-210ENST00000543898 EIF4G2P78344 907 aaKnown RBP eCLIP11.66□□□□□ -0.54
ABCB1-210ENST00000543898 SMARCA4P51532 1647 aa11.64□□□□□ -0.55
ABCB1-210ENST00000543898 KIF27Q86VH2 1401 aa11.64□□□□□ -0.55
ABCB1-210ENST00000543898 BAZ1BQ9UIG0 1483 aaKnown RBP11.64□□□□□ -0.55
ABCB1-210ENST00000543898 TIMELESSQ9UNS1 1208 aa11.63□□□□□ -0.55
ABCB1-210ENST00000543898 FANCIQ9NVI1 1328 aa11.62□□□□□ -0.55
ABCB1-210ENST00000543898 HSPA5P11021 654 aaKnown RBP11.6□□□□□ -0.55
ABCB1-210ENST00000543898 MTUS2Q5JR59 1369 aa11.59□□□□□ -0.55
ABCB1-210ENST00000543898 LAS1LQ9Y4W2 734 aaKnown RBP11.58□□□□□ -0.56
ABCB1-210ENST00000543898 SYNJ1O43426 1573 aa11.57□□□□□ -0.56
ABCB1-210ENST00000543898 TMC1Q8TDI8 760 aa11.57□□□□□ -0.56
ABCB1-210ENST00000543898 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.57□□□□□ -0.56
ABCB1-210ENST00000543898 PKNOX2Q96KN3 472 aa11.56□□□□□ -0.56
ABCB1-210ENST00000543898 GLIPR1L2Q4G1C9 344 aa11.56□□□□□ -0.56
ABCB1-210ENST00000543898 ARAP1Q96P48 1450 aa11.55□□□□□ -0.56
ABCB1-210ENST00000543898 RRBP1Q9P2E9 1410 aaKnown RBP11.54□□□□□ -0.56
ABCB1-210ENST00000543898 WDR97A6NE52 1622 aa11.53□□□□□ -0.56
ABCB1-210ENST00000543898 FOXD1Q16676 465 aa11.53□□□□□ -0.56
ABCB1-210ENST00000543898 ERICH6BQ5W0A0 696 aa11.52□□□□□ -0.56
ABCB1-210ENST00000543898 NEFMP07197 916 aa11.52□□□□□ -0.57
ABCB1-210ENST00000543898 EIF4G1Q04637 1599 aaKnown RBP11.52□□□□□ -0.57
ABCB1-210ENST00000543898 CARMIL1Q5VZK9 1371 aa11.51□□□□□ -0.57
ABCB1-210ENST00000543898 PHLDB1Q86UU1 1377 aa11.5□□□□□ -0.57
ABCB1-210ENST00000543898 PAK3O75914 559 aaPredicted RBP11.5□□□□□ -0.57
ABCB1-210ENST00000543898 CUX2O14529 1486 aa11.49□□□□□ -0.57
ABCB1-210ENST00000543898 CCDC184Q52MB2 194 aa11.48□□□□□ -0.57
ABCB1-210ENST00000543898 IPO9Q96P70 1041 aaKnown RBP11.48□□□□□ -0.57
ABCB1-210ENST00000543898 SLC4A1APQ9BWU0 796 aaKnown RBP11.47□□□□□ -0.57
ABCB1-210ENST00000543898 A0A0U1RQG5 324 aaPredicted RBP11.47□□□□□ -0.57
ABCB1-210ENST00000543898 ARHGAP35Q9NRY4 1499 aa11.47□□□□□ -0.57
ABCB1-210ENST00000543898 FHAD1B1AJZ9 1412 aa11.47□□□□□ -0.57
ABCB1-210ENST00000543898 ZNF777Q9ULD5 760 aaPredicted RBP11.47□□□□□ -0.57
ABCB1-210ENST00000543898 PRKRIP1Q9H875 184 aaPredicted RBP11.46□□□□□ -0.57
ABCB1-210ENST00000543898 KDM2AQ9Y2K7 1162 aa11.45□□□□□ -0.58
ABCB1-210ENST00000543898 L3MBTL2Q969R5 705 aa11.45□□□□□ -0.58
ABCB1-210ENST00000543898 WASHC2AQ641Q2 1341 aa11.44□□□□□ -0.58
ABCB1-210ENST00000543898 ATAD2BQ9ULI0 1458 aa11.44□□□□□ -0.58
ABCB1-210ENST00000543898 FHOD3Q2V2M9 1422 aa11.42□□□□□ -0.58
ABCB1-210ENST00000543898 PRXQ9BXM0 1461 aa11.41□□□□□ -0.58
ABCB1-210ENST00000543898 ZBED9Q6R2W3 1325 aa11.41□□□□□ -0.58
ABCB1-210ENST00000543898 NUDCQ9Y266 331 aa11.4□□□□□ -0.58
ABCB1-210ENST00000543898 MPHOSPH9Q99550 1183 aa11.4□□□□□ -0.58
ABCB1-210ENST00000543898 ARXQ96QS3 562 aa11.39□□□□□ -0.59
ABCB1-210ENST00000543898 LRRC9Q6ZRR7 1453 aa11.39□□□□□ -0.59
ABCB1-210ENST00000543898 PPM1GO15355 546 aaPredicted RBP11.39□□□□□ -0.59
ABCB1-210ENST00000543898 UBE2Q2Q8WVN8 375 aa11.38□□□□□ -0.59
ABCB1-210ENST00000543898 MAPKBP1O60336 1514 aa11.38□□□□□ -0.59
ABCB1-210ENST00000543898 IL27Q8NEV9 243 aa11.38□□□□□ -0.59
ABCB1-210ENST00000543898 CCDC18Q5T9S5 1454 aa11.37□□□□□ -0.59
ABCB1-210ENST00000543898 IGF1RP08069 1367 aa11.37□□□□□ -0.59
ABCB1-210ENST00000543898 ERICH3Q5RHP9 1530 aa11.36□□□□□ -0.59
ABCB1-210ENST00000543898 FMN1Q68DA7 1419 aa11.34□□□□□ -0.59
ABCB1-210ENST00000543898 DDRGK1Q96HY6 314 aa11.34□□□□□ -0.59
ABCB1-210ENST00000543898 CARD11Q9BXL7 1154 aa11.34□□□□□ -0.59
ABCB1-210ENST00000543898 EXOC6Q8TAG9 804 aa11.33□□□□□ -0.6
ABCB1-210ENST00000543898 AKNAQ7Z591 1439 aa11.33□□□□□ -0.6
ABCB1-210ENST00000543898 SLC4A3P48751 1232 aa11.33□□□□□ -0.6
ABCB1-210ENST00000543898 RCAN3Q9UKA8 241 aa11.32□□□□□ -0.6
ABCB1-210ENST00000543898 C11orf95C9JLR9 678 aaPredicted RBP11.32□□□□□ -0.6
ABCB1-210ENST00000543898 PDE4AP27815 886 aa11.32□□□□□ -0.6
ABCB1-210ENST00000543898 TCERG1O14776 1098 aaKnown RBP11.32□□□□□ -0.6
ABCB1-210ENST00000543898 RGS3P49796 1198 aa11.31□□□□□ -0.6
ABCB1-210ENST00000543898 CCDC7Q96M83 1385 aa11.31□□□□□ -0.6
ABCB1-210ENST00000543898 UACAQ9BZF9 1416 aa11.31□□□□□ -0.6
ABCB1-210ENST00000543898 TOP2BQ02880 1626 aa11.31□□□□□ -0.6
ABCB1-210ENST00000543898 CANXP27824 592 aaKnown RBP11.3□□□□□ -0.6
ABCB1-210ENST00000543898 CNTLNQ9NXG0 1405 aa11.3□□□□□ -0.6
ABCB1-210ENST00000543898 KIF7Q2M1P5 1343 aa11.3□□□□□ -0.6
ABCB1-210ENST00000543898 PLIN1O60240 522 aa11.29□□□□□ -0.6
ABCB1-210ENST00000543898 FGD6Q6ZV73 1430 aa11.29□□□□□ -0.6
ABCB1-210ENST00000543898 TIAM1Q13009 1591 aa11.29□□□□□ -0.6
ABCB1-210ENST00000543898 CC2D1BQ5T0F9 858 aaKnown RBP11.28□□□□□ -0.6
ABCB1-210ENST00000543898 RGL3Q3MIN7 710 aa11.28□□□□□ -0.6
ABCB1-210ENST00000543898 PDE4CQ08493 712 aa11.28□□□□□ -0.6
ABCB1-210ENST00000543898 NBPF8Q3BBV2 869 aa11.26□□□□□ -0.61
ABCB1-210ENST00000543898 RRP1P56182 461 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms