RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, humanhuman

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-222ENST00000543695 TRHP20396 242 aaPredicted RBP17.74■□□□□ 0.43
LDHA-222ENST00000543695 PBRM1Q86U86 1689 aa17.74■□□□□ 0.43
LDHA-222ENST00000543695 FHAD1B1AJZ9 1412 aa17.71■□□□□ 0.43
LDHA-222ENST00000543695 GRIN2AQ12879 1464 aa17.7■□□□□ 0.42
LDHA-222ENST00000543695 EHMT2Q96KQ7 1210 aa17.7■□□□□ 0.42
LDHA-222ENST00000543695 CEP162Q5TB80 1403 aa17.69■□□□□ 0.42
LDHA-222ENST00000543695 ERICH3Q5RHP9 1530 aa17.67■□□□□ 0.42
LDHA-222ENST00000543695 NUP160Q12769 1436 aa17.64■□□□□ 0.42
LDHA-222ENST00000543695 ADAMTS12P58397 1594 aa17.63■□□□□ 0.41
LDHA-222ENST00000543695 JPH4Q96JJ6 628 aa17.58■□□□□ 0.4
LDHA-222ENST00000543695 CEP170Q5SW79 1584 aa17.57■□□□□ 0.4
LDHA-222ENST00000543695 KIF27Q86VH2 1401 aa17.55■□□□□ 0.4
LDHA-222ENST00000543695 IGF1RP08069 1367 aa17.55■□□□□ 0.4
LDHA-222ENST00000543695 UBTFP17480 764 aaKnown RBP17.53■□□□□ 0.4
LDHA-222ENST00000543695 PHF23Q9BUL5 403 aaPredicted RBP17.52■□□□□ 0.4
LDHA-222ENST00000543695 PRG4Q92954 1404 aaPredicted RBP17.51■□□□□ 0.39
LDHA-222ENST00000543695 ERCC6L2Q5T890 1561 aa17.5■□□□□ 0.39
LDHA-222ENST00000543695 RAPGEF2Q9Y4G8 1499 aa17.5■□□□□ 0.39
LDHA-222ENST00000543695 PRXQ9BXM0 1461 aa17.48■□□□□ 0.39
LDHA-222ENST00000543695 SHROOM2Q13796 1616 aa17.47■□□□□ 0.39
LDHA-222ENST00000543695 ZEB1P37275 1124 aaPredicted RBP17.45■□□□□ 0.38
LDHA-222ENST00000543695 CLIP1P30622 1438 aa17.45■□□□□ 0.38
LDHA-222ENST00000543695 CARMIL1Q5VZK9 1371 aa17.44■□□□□ 0.38
LDHA-222ENST00000543695 KIAA0586Q9BVV6 1533 aa17.42■□□□□ 0.38
LDHA-222ENST00000543695 NPM1P06748 294 aaKnown RBP eCLIP17.4■□□□□ 0.38
LDHA-222ENST00000543695 VPS8Q8N3P4 1428 aa17.38■□□□□ 0.37
LDHA-222ENST00000543695 CUL7Q14999 1698 aa17.38■□□□□ 0.37
LDHA-222ENST00000543695 PPARGC1BQ86YN6 1023 aaKnown RBP17.33■□□□□ 0.36
LDHA-222ENST00000543695 PTPRGP23470 1445 aa17.29■□□□□ 0.36
LDHA-222ENST00000543695 CARMIL2Q6F5E8 1435 aa17.29■□□□□ 0.36
LDHA-222ENST00000543695 TTBK1Q5TCY1 1321 aaPredicted RBP17.28■□□□□ 0.36
LDHA-222ENST00000543695 FAM69CQ0P6D2 419 aa17.27■□□□□ 0.36
LDHA-222ENST00000543695 IQGAP2Q13576 1575 aa17.2■□□□□ 0.34
LDHA-222ENST00000543695 ABCC10Q5T3U5 1492 aa17.19■□□□□ 0.34
LDHA-222ENST00000543695 MAPKBP1O60336 1514 aa17.18■□□□□ 0.34
LDHA-222ENST00000543695 ADCY10Q96PN6 1610 aa17.18■□□□□ 0.34
LDHA-222ENST00000543695 ARHGAP35Q9NRY4 1499 aa17.15■□□□□ 0.34
LDHA-222ENST00000543695 CTTNBP2Q8WZ74 1663 aa17.15■□□□□ 0.34
LDHA-222ENST00000543695 APLP2Q06481 763 aa17.14■□□□□ 0.33
LDHA-222ENST00000543695 DISP1Q96F81 1524 aa17.13■□□□□ 0.33
LDHA-222ENST00000543695 UACAQ9BZF9 1416 aa17.13■□□□□ 0.33
LDHA-222ENST00000543695 ABCC2Q92887 1545 aa17.11■□□□□ 0.33
LDHA-222ENST00000543695 UGGT2Q9NYU1 1516 aa17.11■□□□□ 0.33
LDHA-222ENST00000543695 KIF13AQ9H1H9 1805 aa17.1■□□□□ 0.33
LDHA-222ENST00000543695 UHRF1BP1LA0JNW5 1464 aa17.09■□□□□ 0.33
LDHA-222ENST00000543695 DIP2BQ9P265 1576 aa17.07■□□□□ 0.32
LDHA-222ENST00000543695 PLB1Q6P1J6 1458 aa17.07■□□□□ 0.32
LDHA-222ENST00000543695 MAP3K1Q13233 1512 aa17.06■□□□□ 0.32
LDHA-222ENST00000543695 ASXL2Q76L83 1435 aa17.06■□□□□ 0.32
LDHA-222ENST00000543695 CCER1Q8TC90 406 aaPredicted RBP17.05■□□□□ 0.32
LDHA-222ENST00000543695 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.04■□□□□ 0.32
LDHA-222ENST00000543695 RANGAP1P46060 587 aaPredicted RBP17.04■□□□□ 0.32
LDHA-222ENST00000543695 EFCAB5A4FU69 1503 aa17.04■□□□□ 0.32
LDHA-222ENST00000543695 CFAP43Q8NDM7 1665 aa17.03■□□□□ 0.32
LDHA-222ENST00000543695 KIAA0556O60303 1618 aa17.02■□□□□ 0.31
LDHA-222ENST00000543695 KDM5BQ9UGL1 1544 aa17.01■□□□□ 0.31
LDHA-222ENST00000543695 TIAM1Q13009 1591 aa17■□□□□ 0.31
LDHA-222ENST00000543695 P3H3Q8IVL6 736 aa16.97■□□□□ 0.31
LDHA-222ENST00000543695 RRBP1Q9P2E9 1410 aaKnown RBP16.95■□□□□ 0.3
LDHA-222ENST00000543695 PCF11O94913 1555 aaKnown RBP16.94■□□□□ 0.3
LDHA-222ENST00000543695 GLI2P10070 1586 aa16.94■□□□□ 0.3
LDHA-222ENST00000543695 EPRSP07814 1512 aaKnown RBP16.93■□□□□ 0.3
LDHA-222ENST00000543695 KCNH8Q96L42 1107 aa16.92■□□□□ 0.3
LDHA-222ENST00000543695 SAMD9Q5K651 1589 aa16.92■□□□□ 0.3
LDHA-222ENST00000543695 TSPOAP1O95153 1857 aa16.92■□□□□ 0.3
LDHA-222ENST00000543695 KDM6BO15054 1643 aa16.92■□□□□ 0.3
LDHA-222ENST00000543695 WDR7Q9Y4E6 1490 aa16.9■□□□□ 0.3
LDHA-222ENST00000543695 FYCO1Q9BQS8 1478 aa16.89■□□□□ 0.29
LDHA-222ENST00000543695 KANK4Q5T7N3 995 aaPredicted RBP16.89■□□□□ 0.29
LDHA-222ENST00000543695 ZCCHC11Q5TAX3 1644 aaKnown RBP16.88■□□□□ 0.29
LDHA-222ENST00000543695 ABCA8O94911 1581 aa16.87■□□□□ 0.29
LDHA-222ENST00000543695 ARID3CA6NKF2 412 aa16.86■□□□□ 0.29
LDHA-222ENST00000543695 HNRNPUL2Q1KMD3 747 aaKnown RBP16.86■□□□□ 0.29
LDHA-222ENST00000543695 LRRC9Q6ZRR7 1453 aa16.86■□□□□ 0.29
LDHA-222ENST00000543695 TEX14Q8IWB6 1497 aa16.86■□□□□ 0.29
LDHA-222ENST00000543695 CASKIN1Q8WXD9 1431 aa16.85■□□□□ 0.29
LDHA-222ENST00000543695 CD109Q6YHK3 1445 aa16.83■□□□□ 0.28
LDHA-222ENST00000543695 FHOD3Q2V2M9 1422 aa16.82■□□□□ 0.28
LDHA-222ENST00000543695 FMN1Q68DA7 1419 aa16.82■□□□□ 0.28
LDHA-222ENST00000543695 CCNB3Q8WWL7 1395 aa16.81■□□□□ 0.28
LDHA-222ENST00000543695 KDM4FA0A1W2PPD8 638 aa16.81■□□□□ 0.28
LDHA-222ENST00000543695 ATP10BO94823 1461 aa16.8■□□□□ 0.28
LDHA-222ENST00000543695 MAP3K4Q9Y6R4 1608 aa16.8■□□□□ 0.28
LDHA-222ENST00000543695 COL17A1Q9UMD9 1497 aaPredicted RBP16.8■□□□□ 0.28
LDHA-222ENST00000543695 LRRIQ1Q96JM4 1722 aa16.79■□□□□ 0.28
LDHA-222ENST00000543695 PPRC1Q5VV67 1664 aaKnown RBP16.79■□□□□ 0.28
LDHA-222ENST00000543695 POTEDQ86YR6 584 aa16.79■□□□□ 0.28
LDHA-222ENST00000543695 CLSPNQ9HAW4 1339 aa16.77■□□□□ 0.28
LDHA-222ENST00000543695 MAGI3Q5TCQ9 1506 aa16.76■□□□□ 0.27
LDHA-222ENST00000543695 PLEKHD1A6NEE1 506 aa16.74■□□□□ 0.27
LDHA-222ENST00000543695 FOXD1Q16676 465 aa16.72■□□□□ 0.27
LDHA-222ENST00000543695 RAPGEF6Q8TEU7 1601 aa16.7■□□□□ 0.26
LDHA-222ENST00000543695 DHX57Q6P158 1386 aaKnown RBP16.69■□□□□ 0.26
LDHA-222ENST00000543695 PHLDB1Q86UU1 1377 aa16.69■□□□□ 0.26
LDHA-222ENST00000543695 NUP153P49790 1475 aaKnown RBP16.68■□□□□ 0.26
LDHA-222ENST00000543695 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.68■□□□□ 0.26
LDHA-222ENST00000543695 HECW1Q76N89 1606 aa16.68■□□□□ 0.26
LDHA-222ENST00000543695 SUPT6HQ7KZ85 1726 aaKnown RBP16.67■□□□□ 0.26
LDHA-222ENST00000543695 EHBP1L1Q8N3D4 1523 aa16.66■□□□□ 0.26
LDHA-222ENST00000543695 ATP1B4Q9UN42 357 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms