RNA–Protein interactions for RNA: ENST00000543014.1

NEK8-202, Transcript of NIMA related kinase 8, humanhuman

TSL 2

Gene NEK8, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK8-202ENST00000543014 TIAM1Q13009 1591 aa29.88■■■□□ 2.37
NEK8-202ENST00000543014 CTTNBP2Q8WZ74 1663 aa29.88■■■□□ 2.37
NEK8-202ENST00000543014 TARBP1Q13395 1621 aaKnown RBP29.82■■■□□ 2.36
NEK8-202ENST00000543014 CCNB3Q8WWL7 1395 aa29.78■■■□□ 2.36
NEK8-202ENST00000543014 PCF11O94913 1555 aaKnown RBP29.77■■■□□ 2.36
NEK8-202ENST00000543014 LRRC9Q6ZRR7 1453 aa29.77■■■□□ 2.36
NEK8-202ENST00000543014 MRC2Q9UBG0 1479 aa29.76■■■□□ 2.35
NEK8-202ENST00000543014 FHOD3Q2V2M9 1422 aa29.75■■■□□ 2.35
NEK8-202ENST00000543014 P3H3Q8IVL6 736 aa29.75■■■□□ 2.35
NEK8-202ENST00000543014 AQRO60306 1485 aaKnown RBP eCLIP29.74■■■□□ 2.357e-7■■■□□ 15.5
NEK8-202ENST00000543014 CFAP43Q8NDM7 1665 aa29.74■■■□□ 2.35
NEK8-202ENST00000543014 FYCO1Q9BQS8 1478 aa29.73■■■□□ 2.35
NEK8-202ENST00000543014 CASKIN1Q8WXD9 1431 aa29.7■■■□□ 2.34
NEK8-202ENST00000543014 FMN1Q68DA7 1419 aa29.67■■■□□ 2.34
NEK8-202ENST00000543014 CLSPNQ9HAW4 1339 aa29.66■■■□□ 2.34
NEK8-202ENST00000543014 SAMD9Q5K651 1589 aa29.63■■■□□ 2.33
NEK8-202ENST00000543014 PBRM1Q86U86 1689 aa29.61■■■□□ 2.33
NEK8-202ENST00000543014 ATP1B4Q9UN42 357 aaPredicted RBP29.59■■■□□ 2.33
NEK8-202ENST00000543014 DHX57Q6P158 1386 aaKnown RBP29.58■■■□□ 2.33
NEK8-202ENST00000543014 PHLDB1Q86UU1 1377 aa29.56■■■□□ 2.32
NEK8-202ENST00000543014 SNAPC4Q5SXM2 1469 aa29.55■■■□□ 2.32
NEK8-202ENST00000543014 WDR62O43379 1518 aa29.55■■■□□ 2.32
NEK8-202ENST00000543014 IFT140Q96RY7 1462 aa29.53■■■□□ 2.32
NEK8-202ENST00000543014 GRIN2BQ13224 1484 aa29.52■■■□□ 2.32
NEK8-202ENST00000543014 ADAMTS12P58397 1594 aa29.51■■■□□ 2.31
NEK8-202ENST00000543014 ZNF316A6NFI3 1004 aaPredicted RBP29.51■■■□□ 2.31
NEK8-202ENST00000543014 DIEXFQ68CQ4 756 aaKnown RBP29.5■■■□□ 2.31
NEK8-202ENST00000543014 ITGAEP38570 1179 aa29.46■■■□□ 2.31
NEK8-202ENST00000543014 THOC2Q8NI27 1593 aaKnown RBP29.44■■■□□ 2.3
NEK8-202ENST00000543014 IQGAP2Q13576 1575 aa29.4■■■□□ 2.3
NEK8-202ENST00000543014 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.4■■■□□ 2.3
NEK8-202ENST00000543014 ZNF608Q9ULD9 1512 aaPredicted RBP29.39■■■□□ 2.29
NEK8-202ENST00000543014 FAM50AQ14320 339 aaKnown RBP29.38■■■□□ 2.29
NEK8-202ENST00000543014 RAB3GAP2Q9H2M9 1393 aa29.37■■■□□ 2.29
NEK8-202ENST00000543014 ERCC6Q03468 1493 aa29.36■■■□□ 2.29
NEK8-202ENST00000543014 MTUS2Q5JR59 1369 aa29.35■■■□□ 2.29
NEK8-202ENST00000543014 SETD5Q9C0A6 1442 aa29.35■■■□□ 2.29
NEK8-202ENST00000543014 LRRIQ1Q96JM4 1722 aa29.33■■■□□ 2.29
NEK8-202ENST00000543014 FGD6Q6ZV73 1430 aa29.28■■■□□ 2.28
NEK8-202ENST00000543014 CCDC18Q5T9S5 1454 aa29.28■■■□□ 2.28
NEK8-202ENST00000543014 UGGT2Q9NYU1 1516 aa29.27■■■□□ 2.28
NEK8-202ENST00000543014 EIF4G3O43432 1585 aaKnown RBP29.26■■■□□ 2.27
NEK8-202ENST00000543014 EHBP1L1Q8N3D4 1523 aa29.26■■■□□ 2.27
NEK8-202ENST00000543014 HECW1Q76N89 1606 aa29.23■■■□□ 2.27
NEK8-202ENST00000543014 KIAA0586Q9BVV6 1533 aa29.22■■■□□ 2.27
NEK8-202ENST00000543014 NCOA2Q15596 1464 aa29.21■■■□□ 2.27
NEK8-202ENST00000543014 SUPT6HQ7KZ85 1726 aaKnown RBP29.21■■■□□ 2.27
NEK8-202ENST00000543014 GRIN2AQ12879 1464 aa29.18■■■□□ 2.26
NEK8-202ENST00000543014 MYOM3Q5VTT5 1437 aa29.17■■■□□ 2.26
NEK8-202ENST00000543014 MAPKBP1O60336 1514 aa29.16■■■□□ 2.26
NEK8-202ENST00000543014 MAGI1Q96QZ7 1491 aaPredicted RBP29.15■■■□□ 2.26
NEK8-202ENST00000543014 ARHGEF11O15085 1522 aa29.13■■■□□ 2.25
NEK8-202ENST00000543014 EPRSP07814 1512 aaKnown RBP29.12■■■□□ 2.25
NEK8-202ENST00000543014 MAGI3Q5TCQ9 1506 aa29.11■■■□□ 2.25
NEK8-202ENST00000543014 KIAA0556O60303 1618 aa29.09■■■□□ 2.25
NEK8-202ENST00000543014 DISP1Q96F81 1524 aa29.08■■■□□ 2.25
NEK8-202ENST00000543014 SYNJ2O15056 1496 aa29.06■■■□□ 2.24
NEK8-202ENST00000543014 PTPN23Q9H3S7 1636 aa29.02■■■□□ 2.24
NEK8-202ENST00000543014 HFM1A2PYH4 1435 aa29.01■■■□□ 2.23
NEK8-202ENST00000543014 CHMP7Q8WUX9 453 aaPredicted RBP29.01■■■□□ 2.23
NEK8-202ENST00000543014 CDK13Q14004 1512 aaKnown RBP29.01■■■□□ 2.23
NEK8-202ENST00000543014 PTPRKQ15262 1439 aa29■■■□□ 2.23
NEK8-202ENST00000543014 TCOF1Q13428 1488 aaKnown RBP28.98■■■□□ 2.23
NEK8-202ENST00000543014 CEP170Q5SW79 1584 aa28.96■■■□□ 2.23
NEK8-202ENST00000543014 MIA2Q96PC5 1412 aa28.93■■■□□ 2.22
NEK8-202ENST00000543014 RAPGEF6Q8TEU7 1601 aa28.92■■■□□ 2.22
NEK8-202ENST00000543014 TIMELESSQ9UNS1 1208 aa28.92■■■□□ 2.22
NEK8-202ENST00000543014 NUP160Q12769 1436 aa28.9■■■□□ 2.22
NEK8-202ENST00000543014 NAIPQ13075 1403 aa28.9■■■□□ 2.22
NEK8-202ENST00000543014 NUP153P49790 1475 aaKnown RBP28.9■■■□□ 2.22
NEK8-202ENST00000543014 CENPBP07199 599 aaPredicted RBP28.89■■■□□ 2.22
NEK8-202ENST00000543014 MIER1Q8N108 512 aa28.88■■■□□ 2.21
NEK8-202ENST00000543014 UACAQ9BZF9 1416 aa28.87■■■□□ 2.21
NEK8-202ENST00000543014 ACIN1Q9UKV3 1341 aaKnown RBP28.87■■■□□ 2.21
NEK8-202ENST00000543014 FBLN2P98095 1184 aa28.86■■■□□ 2.21
NEK8-202ENST00000543014 SIN3AQ96ST3 1273 aa28.85■■■□□ 2.21
NEK8-202ENST00000543014 ARID3CA6NKF2 412 aa28.84■■■□□ 2.21
NEK8-202ENST00000543014 CARMIL2Q6F5E8 1435 aa28.84■■■□□ 2.21
NEK8-202ENST00000543014 CDK11AQ9UQ88 783 aaPredicted RBP28.83■■■□□ 2.21
NEK8-202ENST00000543014 AKNAQ7Z591 1439 aa28.81■■■□□ 2.2
NEK8-202ENST00000543014 NEUROD1Q13562 356 aa28.81■■■□□ 2.2
NEK8-202ENST00000543014 JPH4Q96JJ6 628 aa28.79■■■□□ 2.2
NEK8-202ENST00000543014 SCAF1Q9H7N4 1312 aaKnown RBP28.79■■■□□ 2.2
NEK8-202ENST00000543014 GCC2Q8IWJ2 1684 aa28.76■■■□□ 2.19
NEK8-202ENST00000543014 PLB1Q6P1J6 1458 aa28.72■■■□□ 2.19
NEK8-202ENST00000543014 TROQ12816 1431 aaPredicted RBP28.71■■■□□ 2.19
NEK8-202ENST00000543014 RRP7BPQ9NSQ0 103 aa28.7■■■□□ 2.18
NEK8-202ENST00000543014 CHIC2Q9UKJ5 165 aa28.69■■■□□ 2.18
NEK8-202ENST00000543014 PPP1R15AO75807 674 aaPredicted RBP28.66■■■□□ 2.18
NEK8-202ENST00000543014 DAPK1P53355 1430 aa28.64■■■□□ 2.18
NEK8-202ENST00000543014 PRG4Q92954 1404 aaPredicted RBP28.64■■■□□ 2.18
NEK8-202ENST00000543014 ROCK1Q13464 1354 aa28.64■■■□□ 2.17
NEK8-202ENST00000543014 DNMT1P26358 1616 aaKnown RBP28.63■■■□□ 2.17
NEK8-202ENST00000543014 TONSLQ96HA7 1378 aa28.63■■■□□ 2.17
NEK8-202ENST00000543014 ADCY10Q96PN6 1610 aa28.61■■■□□ 2.17
NEK8-202ENST00000543014 ABCA8O94911 1581 aa28.6■■■□□ 2.17
NEK8-202ENST00000543014 ABCC5O15440 1437 aa28.59■■■□□ 2.17
NEK8-202ENST00000543014 ITSN2Q9NZM3 1697 aa28.58■■■□□ 2.17
NEK8-202ENST00000543014 YTHDC1Q96MU7 727 aaKnown RBP28.57■■■□□ 2.16
NEK8-202ENST00000543014 KDM6BO15054 1643 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms