RNA–Protein interactions for RNA: ENST00000542791.1

MRPS35-205, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-205ENST00000542791 FHAD1B1AJZ9 1412 aa13.78□□□□□ -0.2
MRPS35-205ENST00000542791 NUP160Q12769 1436 aa13.77□□□□□ -0.21
MRPS35-205ENST00000542791 ERICH3Q5RHP9 1530 aa13.77□□□□□ -0.21
MRPS35-205ENST00000542791 CEP170Q5SW79 1584 aa13.72□□□□□ -0.21
MRPS35-205ENST00000542791 ERCC6L2Q5T890 1561 aa13.67□□□□□ -0.22
MRPS35-205ENST00000542791 TRHP20396 242 aaPredicted RBP13.67□□□□□ -0.22
MRPS35-205ENST00000542791 SHROOM2Q13796 1616 aa13.66□□□□□ -0.22
MRPS35-205ENST00000542791 IGF1RP08069 1367 aa13.65□□□□□ -0.22
MRPS35-205ENST00000542791 KIF27Q86VH2 1401 aa13.64□□□□□ -0.23
MRPS35-205ENST00000542791 JPH4Q96JJ6 628 aa13.61□□□□□ -0.23
MRPS35-205ENST00000542791 PRG4Q92954 1404 aaPredicted RBP13.6□□□□□ -0.23
MRPS35-205ENST00000542791 RUSC2Q8N2Y8 1516 aa13.58□□□□□ -0.24
MRPS35-205ENST00000542791 KIAA0586Q9BVV6 1533 aa13.55□□□□□ -0.24
MRPS35-205ENST00000542791 CUL7Q14999 1698 aa13.55□□□□□ -0.24
MRPS35-205ENST00000542791 CARMIL1Q5VZK9 1371 aa13.54□□□□□ -0.24
MRPS35-205ENST00000542791 SCAF1Q9H7N4 1312 aaKnown RBP13.53□□□□□ -0.24
MRPS35-205ENST00000542791 ADCY10Q96PN6 1610 aa13.42□□□□□ -0.26
MRPS35-205ENST00000542791 RAPGEF2Q9Y4G8 1499 aa13.42□□□□□ -0.26
MRPS35-205ENST00000542791 MAPKBP1O60336 1514 aa13.41□□□□□ -0.26
MRPS35-205ENST00000542791 PTPRGP23470 1445 aa13.4□□□□□ -0.26
MRPS35-205ENST00000542791 NPM1P06748 294 aaKnown RBP eCLIP13.4□□□□□ -0.26
MRPS35-205ENST00000542791 IQGAP2Q13576 1575 aa13.4□□□□□ -0.26
MRPS35-205ENST00000542791 CARMIL2Q6F5E8 1435 aa13.39□□□□□ -0.27
MRPS35-205ENST00000542791 TNIKQ9UKE5 1360 aa13.39□□□□□ -0.27
MRPS35-205ENST00000542791 ABCC10Q5T3U5 1492 aa13.39□□□□□ -0.27
MRPS35-205ENST00000542791 DISP1Q96F81 1524 aa13.37□□□□□ -0.27
MRPS35-205ENST00000542791 FAM69CQ0P6D2 419 aa13.36□□□□□ -0.27
MRPS35-205ENST00000542791 KIF13AQ9H1H9 1805 aa13.36□□□□□ -0.27
MRPS35-205ENST00000542791 UGGT2Q9NYU1 1516 aa13.35□□□□□ -0.27
MRPS35-205ENST00000542791 DIP2BQ9P265 1576 aa13.33□□□□□ -0.28
MRPS35-205ENST00000542791 UHRF1BP1LA0JNW5 1464 aa13.33□□□□□ -0.28
MRPS35-205ENST00000542791 PRXQ9BXM0 1461 aa13.33□□□□□ -0.28
MRPS35-205ENST00000542791 ABCC2Q92887 1545 aa13.33□□□□□ -0.28
MRPS35-205ENST00000542791 MAPK8IP2Q13387 824 aaPredicted RBP13.32□□□□□ -0.28
MRPS35-205ENST00000542791 UACAQ9BZF9 1416 aa13.31□□□□□ -0.28
MRPS35-205ENST00000542791 DMRT2Q9Y5R5 561 aa13.31□□□□□ -0.28
MRPS35-205ENST00000542791 TTBK1Q5TCY1 1321 aaPredicted RBP13.31□□□□□ -0.28
MRPS35-205ENST00000542791 KIAA0556O60303 1618 aa13.28□□□□□ -0.28
MRPS35-205ENST00000542791 ASXL2Q76L83 1435 aa13.27□□□□□ -0.29
MRPS35-205ENST00000542791 PLB1Q6P1J6 1458 aa13.26□□□□□ -0.29
MRPS35-205ENST00000542791 KDM5BQ9UGL1 1544 aa13.26□□□□□ -0.29
MRPS35-205ENST00000542791 GOLGA3Q08378 1498 aa13.23□□□□□ -0.29
MRPS35-205ENST00000542791 PPP4R3CPQ6ZMV5 832 aa13.22□□□□□ -0.29
MRPS35-205ENST00000542791 CSRNP3Q8WYN3 585 aa13.22□□□□□ -0.29
MRPS35-205ENST00000542791 GLI2P10070 1586 aa13.22□□□□□ -0.29
MRPS35-205ENST00000542791 CTTNBP2Q8WZ74 1663 aa13.21□□□□□ -0.29
MRPS35-205ENST00000542791 EPRSP07814 1512 aaKnown RBP13.19□□□□□ -0.3
MRPS35-205ENST00000542791 EEA1Q15075 1411 aa13.19□□□□□ -0.3
MRPS35-205ENST00000542791 ABCA8O94911 1581 aa13.17□□□□□ -0.3
MRPS35-205ENST00000542791 KDM6BO15054 1643 aa13.17□□□□□ -0.3
MRPS35-205ENST00000542791 ZCCHC11Q5TAX3 1644 aaKnown RBP13.17□□□□□ -0.3
MRPS35-205ENST00000542791 WDR7Q9Y4E6 1490 aa13.16□□□□□ -0.3
MRPS35-205ENST00000542791 PPRC1Q5VV67 1664 aaKnown RBP13.14□□□□□ -0.31
MRPS35-205ENST00000542791 TSPOAP1O95153 1857 aa13.14□□□□□ -0.31
MRPS35-205ENST00000542791 MAP3K4Q9Y6R4 1608 aa13.12□□□□□ -0.31
MRPS35-205ENST00000542791 SAMD9Q5K651 1589 aa13.11□□□□□ -0.31
MRPS35-205ENST00000542791 COL17A1Q9UMD9 1497 aaPredicted RBP13.1□□□□□ -0.31
MRPS35-205ENST00000542791 P3H3Q8IVL6 736 aa13.1□□□□□ -0.31
MRPS35-205ENST00000542791 TEX14Q8IWB6 1497 aa13.1□□□□□ -0.31
MRPS35-205ENST00000542791 FAM9AQ8IZU1 332 aaPredicted RBP13.07□□□□□ -0.32
MRPS35-205ENST00000542791 ATP10BO94823 1461 aa13.07□□□□□ -0.32
MRPS35-205ENST00000542791 KDM4FA0A1W2PPD8 638 aa13.06□□□□□ -0.32
MRPS35-205ENST00000542791 KCNH8Q96L42 1107 aa13.06□□□□□ -0.32
MRPS35-205ENST00000542791 MAGI3Q5TCQ9 1506 aa13.06□□□□□ -0.32
MRPS35-205ENST00000542791 CD109Q6YHK3 1445 aa13.05□□□□□ -0.32
MRPS35-205ENST00000542791 KIF21BO75037 1637 aa13.04□□□□□ -0.32
MRPS35-205ENST00000542791 ARID3CA6NKF2 412 aa13.03□□□□□ -0.32
MRPS35-205ENST00000542791 FHOD3Q2V2M9 1422 aa13.03□□□□□ -0.32
MRPS35-205ENST00000542791 NUP153P49790 1475 aaKnown RBP13.02□□□□□ -0.33
MRPS35-205ENST00000542791 CFAP43Q8NDM7 1665 aa13.02□□□□□ -0.33
MRPS35-205ENST00000542791 RAPGEF6Q8TEU7 1601 aa13□□□□□ -0.33
MRPS35-205ENST00000542791 RANGAP1P46060 587 aaPredicted RBP13□□□□□ -0.33
MRPS35-205ENST00000542791 EFCAB5A4FU69 1503 aa12.99□□□□□ -0.33
MRPS35-205ENST00000542791 CNKSR2Q8WXI2 1034 aa12.99□□□□□ -0.33
MRPS35-205ENST00000542791 ABCA9Q8IUA7 1624 aa12.96□□□□□ -0.33
MRPS35-205ENST00000542791 ARAP3Q8WWN8 1544 aa12.96□□□□□ -0.33
MRPS35-205ENST00000542791 PHLDB1Q86UU1 1377 aa12.95□□□□□ -0.34
MRPS35-205ENST00000542791 ADGRL1O94910 1474 aa12.95□□□□□ -0.34
MRPS35-205ENST00000542791 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.94□□□□□ -0.34
MRPS35-205ENST00000542791 HNRNPUL2Q1KMD3 747 aaKnown RBP12.94□□□□□ -0.34
MRPS35-205ENST00000542791 UBTFP17480 764 aaKnown RBP12.93□□□□□ -0.34
MRPS35-205ENST00000542791 NEO1Q92859 1461 aa12.91□□□□□ -0.34
MRPS35-205ENST00000542791 PLEKHD1A6NEE1 506 aa12.91□□□□□ -0.34
MRPS35-205ENST00000542791 ARHGAP35Q9NRY4 1499 aa12.91□□□□□ -0.34
MRPS35-205ENST00000542791 EHMT2Q96KQ7 1210 aa12.9□□□□□ -0.34
MRPS35-205ENST00000542791 FMN1Q68DA7 1419 aa12.89□□□□□ -0.35
MRPS35-205ENST00000542791 RAPGEF3O95398 923 aa12.87□□□□□ -0.35
MRPS35-205ENST00000542791 HOXD11P31277 338 aaPredicted RBP12.87□□□□□ -0.35
MRPS35-205ENST00000542791 CDK13Q14004 1512 aaKnown RBP12.87□□□□□ -0.35
MRPS35-205ENST00000542791 NCBP3Q53F19 620 aaKnown RBP12.86□□□□□ -0.35
MRPS35-205ENST00000542791 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.86□□□□□ -0.354e-6■■□□□ 14.5
MRPS35-205ENST00000542791 RNF216Q9NWF9 866 aaPredicted RBP12.84□□□□□ -0.35
MRPS35-205ENST00000542791 FRMPD1Q5SYB0 1578 aa12.83□□□□□ -0.36
MRPS35-205ENST00000542791 TTC37Q6PGP7 1564 aa12.83□□□□□ -0.36
MRPS35-205ENST00000542791 AKNAQ7Z591 1439 aa12.83□□□□□ -0.36
MRPS35-205ENST00000542791 FANCAO15360 1455 aa12.83□□□□□ -0.36
MRPS35-205ENST00000542791 HECW1Q76N89 1606 aa12.82□□□□□ -0.36
MRPS35-205ENST00000542791 DENND4BO75064 1496 aaPredicted RBP12.81□□□□□ -0.36
MRPS35-205ENST00000542791 PLCH2O75038 1416 aa12.8□□□□□ -0.36
MRPS35-205ENST00000542791 CDK11AQ9UQ88 783 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms