RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 GRIN2AQ12879 1464 aa20.76■□□□□ 0.91
CACNA1C-IT3-201ENST00000542680 NUP160Q12769 1436 aa20.76■□□□□ 0.91
CACNA1C-IT3-201ENST00000542680 BIVM-ERCC5R4GMW8 1640 aa20.75■□□□□ 0.91
CACNA1C-IT3-201ENST00000542680 TOP2BQ02880 1626 aa20.74■□□□□ 0.91
CACNA1C-IT3-201ENST00000542680 ABCA5Q8WWZ7 1642 aa20.74■□□□□ 0.91
CACNA1C-IT3-201ENST00000542680 CUX1P39880 1505 aa20.71■□□□□ 0.91
CACNA1C-IT3-201ENST00000542680 LMTK3Q96Q04 1460 aa20.69■□□□□ 0.9
CACNA1C-IT3-201ENST00000542680 ADAMTS12P58397 1594 aa20.65■□□□□ 0.9
CACNA1C-IT3-201ENST00000542680 ADCY10Q96PN6 1610 aa20.63■□□□□ 0.89
CACNA1C-IT3-201ENST00000542680 ABCA10Q8WWZ4 1543 aa20.6■□□□□ 0.89
CACNA1C-IT3-201ENST00000542680 PRG4Q92954 1404 aaPredicted RBP20.6■□□□□ 0.89
CACNA1C-IT3-201ENST00000542680 NPM1P06748 294 aaKnown RBP eCLIP20.56■□□□□ 0.88
CACNA1C-IT3-201ENST00000542680 PPRC1Q5VV67 1664 aaKnown RBP20.56■□□□□ 0.88
CACNA1C-IT3-201ENST00000542680 SOCS7O14512 581 aa20.52■□□□□ 0.88
CACNA1C-IT3-201ENST00000542680 FHAD1B1AJZ9 1412 aa20.46■□□□□ 0.87
CACNA1C-IT3-201ENST00000542680 ILDR2Q71H61 639 aa20.45■□□□□ 0.86
CACNA1C-IT3-201ENST00000542680 EEA1Q15075 1411 aa20.44■□□□□ 0.86
CACNA1C-IT3-201ENST00000542680 JPH4Q96JJ6 628 aa20.43■□□□□ 0.86
CACNA1C-IT3-201ENST00000542680 COL17A1Q9UMD9 1497 aaPredicted RBP20.43■□□□□ 0.86
CACNA1C-IT3-201ENST00000542680 RUSC2Q8N2Y8 1516 aa20.4■□□□□ 0.86
CACNA1C-IT3-201ENST00000542680 GLI2P10070 1586 aa20.38■□□□□ 0.85
CACNA1C-IT3-201ENST00000542680 KIF27Q86VH2 1401 aa20.34■□□□□ 0.85
CACNA1C-IT3-201ENST00000542680 ERICH3Q5RHP9 1530 aa20.32■□□□□ 0.84
CACNA1C-IT3-201ENST00000542680 DISP3Q9P2K9 1392 aa20.29■□□□□ 0.84
CACNA1C-IT3-201ENST00000542680 MAP3K4Q9Y6R4 1608 aa20.27■□□□□ 0.83
CACNA1C-IT3-201ENST00000542680 ASXL2Q76L83 1435 aa20.24■□□□□ 0.83
CACNA1C-IT3-201ENST00000542680 PLB1Q6P1J6 1458 aa20.23■□□□□ 0.83
CACNA1C-IT3-201ENST00000542680 ABCC2Q92887 1545 aa20.21■□□□□ 0.83
CACNA1C-IT3-201ENST00000542680 TEX14Q8IWB6 1497 aa20.19■□□□□ 0.82
CACNA1C-IT3-201ENST00000542680 CUL7Q14999 1698 aa20.18■□□□□ 0.82
CACNA1C-IT3-201ENST00000542680 CSRNP3Q8WYN3 585 aa20.17■□□□□ 0.82
CACNA1C-IT3-201ENST00000542680 KIF21BO75037 1637 aa20.16■□□□□ 0.82
CACNA1C-IT3-201ENST00000542680 SPATA31D1Q6ZQQ2 1576 aa20.13■□□□□ 0.81
CACNA1C-IT3-201ENST00000542680 EPRSP07814 1512 aaKnown RBP20.13■□□□□ 0.81
CACNA1C-IT3-201ENST00000542680 PCF11O94913 1555 aaKnown RBP20.12■□□□□ 0.81
CACNA1C-IT3-201ENST00000542680 IGF1RP08069 1367 aa20.11■□□□□ 0.81
CACNA1C-IT3-201ENST00000542680 FAM9AQ8IZU1 332 aaPredicted RBP20.11■□□□□ 0.81
CACNA1C-IT3-201ENST00000542680 PRXQ9BXM0 1461 aa20.11■□□□□ 0.81
CACNA1C-IT3-201ENST00000542680 PTPRMP28827 1452 aa20.09■□□□□ 0.81
CACNA1C-IT3-201ENST00000542680 PTPRGP23470 1445 aa20.09■□□□□ 0.81
CACNA1C-IT3-201ENST00000542680 KIAA0586Q9BVV6 1533 aa20.08■□□□□ 0.81
CACNA1C-IT3-201ENST00000542680 ADAMTSL3P82987 1691 aa20.08■□□□□ 0.81
CACNA1C-IT3-201ENST00000542680 GOLGA3Q08378 1498 aa20.05■□□□□ 0.8
CACNA1C-IT3-201ENST00000542680 UHRF1BP1LA0JNW5 1464 aa20.05■□□□□ 0.8
CACNA1C-IT3-201ENST00000542680 CERKQ8TCT0 537 aa20.04■□□□□ 0.8
CACNA1C-IT3-201ENST00000542680 CARMIL1Q5VZK9 1371 aa20.02■□□□□ 0.8
CACNA1C-IT3-201ENST00000542680 RAPGEF2Q9Y4G8 1499 aa20.01■□□□□ 0.79
CACNA1C-IT3-201ENST00000542680 KDM5BQ9UGL1 1544 aa19.97■□□□□ 0.79
CACNA1C-IT3-201ENST00000542680 TNIKQ9UKE5 1360 aa19.96■□□□□ 0.79
CACNA1C-IT3-201ENST00000542680 ZCCHC11Q5TAX3 1644 aaKnown RBP19.96■□□□□ 0.79
CACNA1C-IT3-201ENST00000542680 TTBK1Q5TCY1 1321 aaPredicted RBP19.93■□□□□ 0.78
CACNA1C-IT3-201ENST00000542680 UACAQ9BZF9 1416 aa19.93■□□□□ 0.78
CACNA1C-IT3-201ENST00000542680 MAGI3Q5TCQ9 1506 aa19.92■□□□□ 0.78
CACNA1C-IT3-201ENST00000542680 MADDQ8WXG6 1647 aa19.91■□□□□ 0.78
CACNA1C-IT3-201ENST00000542680 CFAP43Q8NDM7 1665 aa19.9■□□□□ 0.78
CACNA1C-IT3-201ENST00000542680 BCORL1Q5H9F3 1711 aa19.9■□□□□ 0.78
CACNA1C-IT3-201ENST00000542680 CARMIL2Q6F5E8 1435 aa19.87■□□□□ 0.77
CACNA1C-IT3-201ENST00000542680 WDR7Q9Y4E6 1490 aa19.86■□□□□ 0.77
CACNA1C-IT3-201ENST00000542680 LOC105371045A0A1W2PR82 267 aa19.85■□□□□ 0.77
CACNA1C-IT3-201ENST00000542680 CTTNBP2Q8WZ74 1663 aa19.84■□□□□ 0.77
CACNA1C-IT3-201ENST00000542680 HSPA2P54652 639 aa19.83■□□□□ 0.77
CACNA1C-IT3-201ENST00000542680 CD109Q6YHK3 1445 aa19.83■□□□□ 0.76
CACNA1C-IT3-201ENST00000542680 UBTFP17480 764 aaKnown RBP19.81■□□□□ 0.76
CACNA1C-IT3-201ENST00000542680 ARAP3Q8WWN8 1544 aa19.81■□□□□ 0.76
CACNA1C-IT3-201ENST00000542680 RIMS1Q86UR5 1692 aaKnown RBP19.79■□□□□ 0.76
CACNA1C-IT3-201ENST00000542680 DISP1Q96F81 1524 aa19.76■□□□□ 0.75
CACNA1C-IT3-201ENST00000542680 IQGAP2Q13576 1575 aa19.75■□□□□ 0.75
CACNA1C-IT3-201ENST00000542680 CEP162Q5TB80 1403 aa19.72■□□□□ 0.75
CACNA1C-IT3-201ENST00000542680 EHMT2Q96KQ7 1210 aa19.71■□□□□ 0.75
CACNA1C-IT3-201ENST00000542680 EFCAB5A4FU69 1503 aa19.68■□□□□ 0.74
CACNA1C-IT3-201ENST00000542680 CLIP1P30622 1438 aa19.66■□□□□ 0.74
CACNA1C-IT3-201ENST00000542680 UGGT2Q9NYU1 1516 aa19.64■□□□□ 0.73
CACNA1C-IT3-201ENST00000542680 STRCQ7RTU9 1775 aa19.63■□□□□ 0.73
CACNA1C-IT3-201ENST00000542680 FRMPD1Q5SYB0 1578 aa19.63■□□□□ 0.73
CACNA1C-IT3-201ENST00000542680 SAMD9Q5K651 1589 aa19.61■□□□□ 0.73
CACNA1C-IT3-201ENST00000542680 KIAA0556O60303 1618 aa19.61■□□□□ 0.73
CACNA1C-IT3-201ENST00000542680 ARID4BQ4LE39 1312 aaPredicted RBP19.6■□□□□ 0.73
CACNA1C-IT3-201ENST00000542680 KCNH8Q96L42 1107 aa19.6■□□□□ 0.73
CACNA1C-IT3-201ENST00000542680 ARHGEF40Q8TER5 1519 aa19.58■□□□□ 0.73
CACNA1C-IT3-201ENST00000542680 ARHGAP35Q9NRY4 1499 aa19.58■□□□□ 0.72
CACNA1C-IT3-201ENST00000542680 PHLDB1Q86UU1 1377 aa19.57■□□□□ 0.72
CACNA1C-IT3-201ENST00000542680 PREX1Q8TCU6 1659 aa19.56■□□□□ 0.72
CACNA1C-IT3-201ENST00000542680 RAPGEF3O95398 923 aa19.56■□□□□ 0.72
CACNA1C-IT3-201ENST00000542680 YEATS2Q9ULM3 1422 aa19.55■□□□□ 0.72
CACNA1C-IT3-201ENST00000542680 IQSEC2Q5JU85 1478 aa19.53■□□□□ 0.72
CACNA1C-IT3-201ENST00000542680 TTC37Q6PGP7 1564 aa19.53■□□□□ 0.72
CACNA1C-IT3-201ENST00000542680 SIGLEC1Q9BZZ2 1709 aa19.52■□□□□ 0.72
CACNA1C-IT3-201ENST00000542680 FER1L4A9Z1Z3 1794 aa19.52■□□□□ 0.71
CACNA1C-IT3-201ENST00000542680 ABCA9Q8IUA7 1624 aa19.51■□□□□ 0.71
CACNA1C-IT3-201ENST00000542680 PLPPR3Q6T4P5 718 aa19.51■□□□□ 0.71
CACNA1C-IT3-201ENST00000542680 ABCA8O94911 1581 aa19.51■□□□□ 0.71
CACNA1C-IT3-201ENST00000542680 LTBP4Q8N2S1 1624 aa19.51■□□□□ 0.71
CACNA1C-IT3-201ENST00000542680 DMRT2Q9Y5R5 561 aa19.49■□□□□ 0.71
CACNA1C-IT3-201ENST00000542680 NEO1Q92859 1461 aa19.48■□□□□ 0.71
CACNA1C-IT3-201ENST00000542680 VPS8Q8N3P4 1428 aa19.48■□□□□ 0.71
CACNA1C-IT3-201ENST00000542680 RICTORQ6R327 1708 aa19.45■□□□□ 0.7
CACNA1C-IT3-201ENST00000542680 FMN1Q68DA7 1419 aa19.44■□□□□ 0.7
CACNA1C-IT3-201ENST00000542680 POGZQ7Z3K3 1410 aa19.44■□□□□ 0.7
CACNA1C-IT3-201ENST00000542680 FANCAO15360 1455 aa19.44■□□□□ 0.7
CACNA1C-IT3-201ENST00000542680 PTPRTO14522 1441 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms