RNA–Protein interactions for RNA: ENST00000542447.6

CADM1-212, Transcript of cell adhesion molecule 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CADM1, Length 4,223 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-212ENST00000542447 KANK4Q5T7N3 995 aaPredicted RBP15.84■□□□□ 0.13
CADM1-212ENST00000542447 MRS2Q9HD23 443 aa15.82■□□□□ 0.12
CADM1-212ENST00000542447 ARXQ96QS3 562 aa15.81■□□□□ 0.12
CADM1-212ENST00000542447 TONSLQ96HA7 1378 aa15.8■□□□□ 0.12
CADM1-212ENST00000542447 WRNQ14191 1432 aaPredicted RBP eCLIP15.79■□□□□ 0.12
CADM1-212ENST00000542447 GOLGA3Q08378 1498 aa15.77■□□□□ 0.12
CADM1-212ENST00000542447 RUSC2Q8N2Y8 1516 aa15.77■□□□□ 0.11
CADM1-212ENST00000542447 PPP4R2Q9NY27 417 aa15.76■□□□□ 0.11
CADM1-212ENST00000542447 FANCIQ9NVI1 1328 aa15.75■□□□□ 0.11
CADM1-212ENST00000542447 DHX57Q6P158 1386 aaKnown RBP15.74■□□□□ 0.11
CADM1-212ENST00000542447 NEFMP07197 916 aa15.73■□□□□ 0.11
CADM1-212ENST00000542447 ARID3CA6NKF2 412 aa15.72■□□□□ 0.11
CADM1-212ENST00000542447 BAZ1BQ9UIG0 1483 aaKnown RBP15.71■□□□□ 0.11
CADM1-212ENST00000542447 CHIC2Q9UKJ5 165 aa15.68■□□□□ 0.1
CADM1-212ENST00000542447 IL27Q8NEV9 243 aa15.67■□□□□ 0.1
CADM1-212ENST00000542447 MROH2BQ7Z745 1585 aa15.66■□□□□ 0.1
CADM1-212ENST00000542447 PAK3O75914 559 aaPredicted RBP15.66■□□□□ 0.1
CADM1-212ENST00000542447 EIF4G1Q04637 1599 aaKnown RBP15.65■□□□□ 0.1
CADM1-212ENST00000542447 CCER2I3L3R5 266 aa15.61■□□□□ 0.09
CADM1-212ENST00000542447 VPS8Q8N3P4 1428 aa15.6■□□□□ 0.09
CADM1-212ENST00000542447 CC2D2AQ9P2K1 1620 aa15.59■□□□□ 0.09
CADM1-212ENST00000542447 RAB3GAP2Q9H2M9 1393 aa15.59■□□□□ 0.09
CADM1-212ENST00000542447 CCNB3Q8WWL7 1395 aa15.58■□□□□ 0.08
CADM1-212ENST00000542447 ERICH6BQ5W0A0 696 aa15.57■□□□□ 0.08
CADM1-212ENST00000542447 CEP164Q9UPV0 1460 aa15.55■□□□□ 0.08
CADM1-212ENST00000542447 EEA1Q15075 1411 aa15.54■□□□□ 0.08
CADM1-212ENST00000542447 RRP7BPQ9NSQ0 103 aa15.54■□□□□ 0.08
CADM1-212ENST00000542447 TMC1Q8TDI8 760 aa15.54■□□□□ 0.08
CADM1-212ENST00000542447 WIZO95785 1651 aa15.54■□□□□ 0.08
CADM1-212ENST00000542447 EIF4G2P78344 907 aaKnown RBP eCLIP15.53■□□□□ 0.08
CADM1-212ENST00000542447 IPO9Q96P70 1041 aaKnown RBP15.52■□□□□ 0.07
CADM1-212ENST00000542447 PPP1R15AO75807 674 aaPredicted RBP15.5■□□□□ 0.07
CADM1-212ENST00000542447 SLC4A3P48751 1232 aa15.49■□□□□ 0.07
CADM1-212ENST00000542447 TIMELESSQ9UNS1 1208 aa15.47■□□□□ 0.07
CADM1-212ENST00000542447 HSPA5P11021 654 aaKnown RBP15.47■□□□□ 0.07
CADM1-212ENST00000542447 BAZ1AQ9NRL2 1556 aaPredicted RBP15.46■□□□□ 0.07
CADM1-212ENST00000542447 ARID4BQ4LE39 1312 aaPredicted RBP15.45■□□□□ 0.06
CADM1-212ENST00000542447 FOXD1Q16676 465 aa15.44■□□□□ 0.06
CADM1-212ENST00000542447 SMARCA4P51532 1647 aa15.44■□□□□ 0.06
CADM1-212ENST00000542447 ATAD2BQ9ULI0 1458 aa15.43■□□□□ 0.06
CADM1-212ENST00000542447 RAPGEF2Q9Y4G8 1499 aa15.43■□□□□ 0.06
CADM1-212ENST00000542447 CCDC184Q52MB2 194 aa15.42■□□□□ 0.06
CADM1-212ENST00000542447 BRPF3Q9ULD4 1205 aa15.41■□□□□ 0.06
CADM1-212ENST00000542447 SETD5Q9C0A6 1442 aa15.4■□□□□ 0.06
CADM1-212ENST00000542447 PPM1GO15355 546 aaPredicted RBP15.39■□□□□ 0.05
CADM1-212ENST00000542447 RGS3P49796 1198 aa15.38■□□□□ 0.05
CADM1-212ENST00000542447 KDM2AQ9Y2K7 1162 aa15.37■□□□□ 0.05
CADM1-212ENST00000542447 NAP1L5Q96NT1 182 aaPredicted RBP15.34■□□□□ 0.05
CADM1-212ENST00000542447 GLIPR1L2Q4G1C9 344 aa15.34■□□□□ 0.05
CADM1-212ENST00000542447 UBE2Q2Q8WVN8 375 aa15.32■□□□□ 0.04
CADM1-212ENST00000542447 SLC4A1APQ9BWU0 796 aaKnown RBP15.32■□□□□ 0.04
CADM1-212ENST00000542447 CANXP27824 592 aaKnown RBP15.31■□□□□ 0.04
CADM1-212ENST00000542447 ZNF777Q9ULD5 760 aaPredicted RBP15.3■□□□□ 0.04
CADM1-212ENST00000542447 NCAPD3P42695 1498 aa15.28■□□□□ 0.04
CADM1-212ENST00000542447 SMARCA2P51531 1590 aa15.28■□□□□ 0.04
CADM1-212ENST00000542447 EXOC6Q8TAG9 804 aa15.28■□□□□ 0.04
CADM1-212ENST00000542447 DDRGK1Q96HY6 314 aa15.28■□□□□ 0.04
CADM1-212ENST00000542447 PDE4AP27815 886 aa15.28■□□□□ 0.04
CADM1-212ENST00000542447 SPRYD3Q8NCJ5 442 aa15.28■□□□□ 0.04
CADM1-212ENST00000542447 MTUS2Q5JR59 1369 aa15.28■□□□□ 0.04
CADM1-212ENST00000542447 PLIN1O60240 522 aa15.27■□□□□ 0.04
CADM1-212ENST00000542447 SKAP1Q86WV1 359 aa15.27■□□□□ 0.04
CADM1-212ENST00000542447 PRKRIP1Q9H875 184 aaPredicted RBP15.27■□□□□ 0.03
CADM1-212ENST00000542447 WDR97A6NE52 1622 aa15.25■□□□□ 0.03
CADM1-212ENST00000542447 NUDCQ9Y266 331 aa15.25■□□□□ 0.03
CADM1-212ENST00000542447 GSE1Q14687 1217 aa15.24■□□□□ 0.03
CADM1-212ENST00000542447 SLKQ9H2G2 1235 aaPredicted RBP15.24■□□□□ 0.03
CADM1-212ENST00000542447 GZF1Q9H116 711 aaPredicted RBP15.23■□□□□ 0.03
CADM1-212ENST00000542447 AKNAQ7Z591 1439 aa15.23■□□□□ 0.03
CADM1-212ENST00000542447 WASHC2AQ641Q2 1341 aa15.22■□□□□ 0.03
CADM1-212ENST00000542447 VSIG10Q8N0Z9 540 aa15.21■□□□□ 0.03
CADM1-212ENST00000542447 L3MBTL2Q969R5 705 aa15.21■□□□□ 0.03
CADM1-212ENST00000542447 NESP48681 1621 aa15.21■□□□□ 0.03
CADM1-212ENST00000542447 PKNOX2Q96KN3 472 aa15.21■□□□□ 0.03
CADM1-212ENST00000542447 RCAN3Q9UKA8 241 aa15.19■□□□□ 0.02
CADM1-212ENST00000542447 ZBED9Q6R2W3 1325 aa15.19■□□□□ 0.02
CADM1-212ENST00000542447 FRAT1Q92837 279 aaPredicted RBP15.19■□□□□ 0.02
CADM1-212ENST00000542447 KIF21BO75037 1637 aa15.18■□□□□ 0.02
CADM1-212ENST00000542447 TCERG1O14776 1098 aaKnown RBP15.18■□□□□ 0.02
CADM1-212ENST00000542447 ARID3AQ99856 593 aa15.17■□□□□ 0.02
CADM1-212ENST00000542447 USP35Q9P2H5 1018 aa15.17■□□□□ 0.02
CADM1-212ENST00000542447 CC2D1BQ5T0F9 858 aaKnown RBP15.16■□□□□ 0.02
CADM1-212ENST00000542447 NFKBIBQ15653 356 aa15.16■□□□□ 0.02
CADM1-212ENST00000542447 UPF2Q9HAU5 1272 aaKnown RBP15.11■□□□□ 0.01
CADM1-212ENST00000542447 ERCC6Q03468 1493 aa15.11■□□□□ 0.01
CADM1-212ENST00000542447 RGL3Q3MIN7 710 aa15.11■□□□□ 0.01
CADM1-212ENST00000542447 CARD11Q9BXL7 1154 aa15.11■□□□□ 0.01
CADM1-212ENST00000542447 KIF27Q86VH2 1401 aa15.1■□□□□ 0.01
CADM1-212ENST00000542447 HSP90AA1P07900 732 aaKnown RBP15.1■□□□□ 0.01
CADM1-212ENST00000542447 RSPH6AQ9H0K4 717 aa15.1■□□□□ 0.01
CADM1-212ENST00000542447 PHLDB1Q86UU1 1377 aa15.1■□□□□ 0.01
CADM1-212ENST00000542447 FRAT2O75474 233 aaPredicted RBP15.1■□□□□ 0.01
CADM1-212ENST00000542447 ARAP1Q96P48 1450 aa15.08■□□□□ 0
CADM1-212ENST00000542447 HMGXB3Q12766 1538 aa15.08■□□□□ 0
CADM1-212ENST00000542447 C11orf95C9JLR9 678 aaPredicted RBP15.07■□□□□ 0
CADM1-212ENST00000542447 RRP1P56182 461 aaKnown RBP15.07■□□□□ 0
CADM1-212ENST00000542447 PNNQ9H307 717 aaKnown RBP15.07■□□□□ 0
CADM1-212ENST00000542447 WDR43Q15061 677 aaKnown RBP eCLIP15.07■□□□□ 0
CADM1-212ENST00000542447 TRIM44Q96DX7 344 aaPredicted RBP15.06■□□□□ 0
CADM1-212ENST00000542447 CRBNQ96SW2 442 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms