RNA–Protein interactions for RNA: ENST00000542293.5

PAAF1-211, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-211ENST00000542293 KDM6BO15054 1643 aa29.1■■■□□ 2.25
PAAF1-211ENST00000542293 MAPKBP1O60336 1514 aa29.08■■■□□ 2.25
PAAF1-211ENST00000542293 JPH4Q96JJ6 628 aa29.01■■■□□ 2.23
PAAF1-211ENST00000542293 WRNQ14191 1432 aaPredicted RBP eCLIP29■■■□□ 2.23
PAAF1-211ENST00000542293 TSPOAP1O95153 1857 aa28.99■■■□□ 2.23
PAAF1-211ENST00000542293 NPM1P06748 294 aaKnown RBP eCLIP28.98■■■□□ 2.23
PAAF1-211ENST00000542293 ADCY10Q96PN6 1610 aa28.97■■■□□ 2.23
PAAF1-211ENST00000542293 ERICH3Q5RHP9 1530 aa28.95■■■□□ 2.23
PAAF1-211ENST00000542293 RUSC2Q8N2Y8 1516 aa28.88■■■□□ 2.21
PAAF1-211ENST00000542293 BIVM-ERCC5R4GMW8 1640 aa28.85■■■□□ 2.21
PAAF1-211ENST00000542293 TOP2BQ02880 1626 aa28.83■■■□□ 2.21
PAAF1-211ENST00000542293 ADGRL1O94910 1474 aa28.8■■■□□ 2.2
PAAF1-211ENST00000542293 HECW2Q9P2P5 1572 aa28.75■■■□□ 2.19
PAAF1-211ENST00000542293 PPRC1Q5VV67 1664 aaKnown RBP28.7■■■□□ 2.18
PAAF1-211ENST00000542293 KIAA0586Q9BVV6 1533 aa28.59■■■□□ 2.17
PAAF1-211ENST00000542293 COL17A1Q9UMD9 1497 aaPredicted RBP28.57■■■□□ 2.16
PAAF1-211ENST00000542293 GLI2P10070 1586 aa28.57■■■□□ 2.16
PAAF1-211ENST00000542293 ASXL2Q76L83 1435 aa28.52■■■□□ 2.16
PAAF1-211ENST00000542293 ABCC2Q92887 1545 aa28.52■■■□□ 2.16
PAAF1-211ENST00000542293 PTPRGP23470 1445 aa28.52■■■□□ 2.16
PAAF1-211ENST00000542293 PLB1Q6P1J6 1458 aa28.49■■■□□ 2.15
PAAF1-211ENST00000542293 TTBK1Q5TCY1 1321 aaPredicted RBP28.45■■■□□ 2.15
PAAF1-211ENST00000542293 CUL7Q14999 1698 aa28.45■■■□□ 2.14
PAAF1-211ENST00000542293 FBXO41Q8TF61 875 aa28.41■■■□□ 2.14
PAAF1-211ENST00000542293 MAP3K4Q9Y6R4 1608 aa28.4■■■□□ 2.14
PAAF1-211ENST00000542293 TNIKQ9UKE5 1360 aa28.37■■■□□ 2.13
PAAF1-211ENST00000542293 IGF1RP08069 1367 aa28.36■■■□□ 2.13
PAAF1-211ENST00000542293 UHRF1BP1LA0JNW5 1464 aa28.35■■■□□ 2.13
PAAF1-211ENST00000542293 EPRSP07814 1512 aaKnown RBP28.35■■■□□ 2.13
PAAF1-211ENST00000542293 TEX14Q8IWB6 1497 aa28.33■■■□□ 2.13
PAAF1-211ENST00000542293 CARMIL2Q6F5E8 1435 aa28.3■■■□□ 2.12
PAAF1-211ENST00000542293 SUPT5HO00267 1087 aaKnown RBP28.29■■■□□ 2.12
PAAF1-211ENST00000542293 UACAQ9BZF9 1416 aa28.27■■■□□ 2.12
PAAF1-211ENST00000542293 KDM5BQ9UGL1 1544 aa28.24■■■□□ 2.11
PAAF1-211ENST00000542293 ZCCHC11Q5TAX3 1644 aaKnown RBP28.2■■■□□ 2.1
PAAF1-211ENST00000542293 KIF27Q86VH2 1401 aa28.19■■■□□ 2.1
PAAF1-211ENST00000542293 IQGAP2Q13576 1575 aa28.18■■■□□ 2.1
PAAF1-211ENST00000542293 DISP1Q96F81 1524 aa28.16■■■□□ 2.1
PAAF1-211ENST00000542293 CARMIL1Q5VZK9 1371 aa28.13■■■□□ 2.09
PAAF1-211ENST00000542293 KIF21BO75037 1637 aa28.11■■■□□ 2.09
PAAF1-211ENST00000542293 WDR7Q9Y4E6 1490 aa28.07■■■□□ 2.08
PAAF1-211ENST00000542293 MAGI3Q5TCQ9 1506 aa28.03■■■□□ 2.08
PAAF1-211ENST00000542293 CD109Q6YHK3 1445 aa28.01■■■□□ 2.07
PAAF1-211ENST00000542293 CFAP43Q8NDM7 1665 aa28■■■□□ 2.07
PAAF1-211ENST00000542293 UGGT2Q9NYU1 1516 aa27.97■■■□□ 2.07
PAAF1-211ENST00000542293 KIAA0556O60303 1618 aa27.96■■■□□ 2.07
PAAF1-211ENST00000542293 PTPRMP28827 1452 aa27.96■■■□□ 2.07
PAAF1-211ENST00000542293 LMTK3Q96Q04 1460 aa27.96■■■□□ 2.07
PAAF1-211ENST00000542293 ADAMTSL3P82987 1691 aa27.94■■■□□ 2.06
PAAF1-211ENST00000542293 KCNH8Q96L42 1107 aa27.9■■■□□ 2.06
PAAF1-211ENST00000542293 PCF11O94913 1555 aaKnown RBP27.86■■■□□ 2.05
PAAF1-211ENST00000542293 ARAP3Q8WWN8 1544 aa27.86■■■□□ 2.05
PAAF1-211ENST00000542293 ABCA8O94911 1581 aa27.77■■■□□ 2.04
PAAF1-211ENST00000542293 BCORL1Q5H9F3 1711 aa27.77■■■□□ 2.04
PAAF1-211ENST00000542293 MADDQ8WXG6 1647 aa27.77■■■□□ 2.04
PAAF1-211ENST00000542293 RAPGEF2Q9Y4G8 1499 aa27.76■■■□□ 2.03
PAAF1-211ENST00000542293 ILDR2Q71H61 639 aa27.74■■■□□ 2.03
PAAF1-211ENST00000542293 SOCS7O14512 581 aa27.67■■■□□ 2.02
PAAF1-211ENST00000542293 RAPGEF3O95398 923 aa27.67■■■□□ 2.02
PAAF1-211ENST00000542293 CERKQ8TCT0 537 aa27.66■■■□□ 2.02
PAAF1-211ENST00000542293 HSPA2P54652 639 aa27.65■■■□□ 2.02
PAAF1-211ENST00000542293 RIMS1Q86UR5 1692 aaKnown RBP27.63■■■□□ 2.01
PAAF1-211ENST00000542293 CTTNBP2Q8WZ74 1663 aa27.62■■■□□ 2.01
PAAF1-211ENST00000542293 PHLDB1Q86UU1 1377 aa27.62■■■□□ 2.01
PAAF1-211ENST00000542293 DISP3Q9P2K9 1392 aa27.62■■■□□ 2.01
PAAF1-211ENST00000542293 ARID4BQ4LE39 1312 aaPredicted RBP27.62■■■□□ 2.01
PAAF1-211ENST00000542293 FRMPD1Q5SYB0 1578 aa27.61■■■□□ 2.01
PAAF1-211ENST00000542293 ABCA9Q8IUA7 1624 aa27.6■■■□□ 2.01
PAAF1-211ENST00000542293 GOLGA3Q08378 1498 aa27.6■■■□□ 2.01
PAAF1-211ENST00000542293 ARID3CA6NKF2 412 aa27.55■■■□□ 2
PAAF1-211ENST00000542293 NEO1Q92859 1461 aa27.54■■■□□ 2
PAAF1-211ENST00000542293 ATP10BO94823 1461 aa27.53■■■□□ 2
PAAF1-211ENST00000542293 ARHGEF40Q8TER5 1519 aa27.49■■□□□ 1.99
PAAF1-211ENST00000542293 PLPPR3Q6T4P5 718 aa27.47■■□□□ 1.99
PAAF1-211ENST00000542293 SIGLEC1Q9BZZ2 1709 aa27.41■■□□□ 1.98
PAAF1-211ENST00000542293 RICTORQ6R327 1708 aa27.4■■□□□ 1.98
PAAF1-211ENST00000542293 SPATA31D1Q6ZQQ2 1576 aa27.38■■□□□ 1.97
PAAF1-211ENST00000542293 DENND4BO75064 1496 aaPredicted RBP27.34■■□□□ 1.97
PAAF1-211ENST00000542293 POGZQ7Z3K3 1410 aa27.33■■□□□ 1.97
PAAF1-211ENST00000542293 FANCAO15360 1455 aa27.33■■□□□ 1.97
PAAF1-211ENST00000542293 P3H3Q8IVL6 736 aa27.33■■□□□ 1.97
PAAF1-211ENST00000542293 FER1L4A9Z1Z3 1794 aa27.31■■□□□ 1.96
PAAF1-211ENST00000542293 FHOD3Q2V2M9 1422 aa27.31■■□□□ 1.96
PAAF1-211ENST00000542293 AKNAQ7Z591 1439 aa27.3■■□□□ 1.96
PAAF1-211ENST00000542293 TTC37Q6PGP7 1564 aa27.3■■□□□ 1.96
PAAF1-211ENST00000542293 YEATS2Q9ULM3 1422 aa27.27■■□□□ 1.96
PAAF1-211ENST00000542293 RAPGEF6Q8TEU7 1601 aa27.27■■□□□ 1.96
PAAF1-211ENST00000542293 ZMYM4Q5VZL5 1548 aa27.26■■□□□ 1.96
PAAF1-211ENST00000542293 FAM9AQ8IZU1 332 aaPredicted RBP27.26■■□□□ 1.95
PAAF1-211ENST00000542293 STRCQ7RTU9 1775 aa27.26■■□□□ 1.95
PAAF1-211ENST00000542293 ZFYVE16Q7Z3T8 1539 aa27.26■■□□□ 1.95
PAAF1-211ENST00000542293 PREX1Q8TCU6 1659 aa27.25■■□□□ 1.95
PAAF1-211ENST00000542293 MLECQ14165 292 aa27.25■■□□□ 1.95
PAAF1-211ENST00000542293 PRXQ9BXM0 1461 aa27.24■■□□□ 1.95
PAAF1-211ENST00000542293 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.23■■□□□ 1.95
PAAF1-211ENST00000542293 HNRNPUL2Q1KMD3 747 aaKnown RBP27.23■■□□□ 1.95
PAAF1-211ENST00000542293 EFCAB5A4FU69 1503 aa27.21■■□□□ 1.95
PAAF1-211ENST00000542293 CFAP74Q9C0B2 1584 aa27.18■■□□□ 1.94
PAAF1-211ENST00000542293 NUP153P49790 1475 aaKnown RBP27.18■■□□□ 1.94
PAAF1-211ENST00000542293 SAMD9Q5K651 1589 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms