RNA–Protein interactions for RNA: ENST00000541974.5

PACRG-205, Transcript of parkin coregulated, humanhuman

TSL 3

Gene PACRG, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-205ENST00000541974 WIZO95785 1651 aa11.94□□□□□ -0.5
PACRG-205ENST00000541974 CLCN6P51797 869 aa11.88□□□□□ -0.51
PACRG-205ENST00000541974 ZNF579Q8NAF0 562 aaKnown RBP11.88□□□□□ -0.51
PACRG-205ENST00000541974 CREBZFQ9NS37 354 aa11.88□□□□□ -0.51
PACRG-205ENST00000541974 TOP2AP11388 1531 aaKnown RBP11.86□□□□□ -0.51
PACRG-205ENST00000541974 PEG3Q9GZU2 1588 aa11.85□□□□□ -0.51
PACRG-205ENST00000541974 SMARCA2P51531 1590 aa11.81□□□□□ -0.52
PACRG-205ENST00000541974 ZRANB1Q9UGI0 708 aa11.8□□□□□ -0.52
PACRG-205ENST00000541974 ATAD2BQ9ULI0 1458 aa11.78□□□□□ -0.52
PACRG-205ENST00000541974 GALR2O43603 387 aaPredicted RBP11.78□□□□□ -0.52
PACRG-205ENST00000541974 AMER1Q5JTC6 1135 aaPredicted RBP11.78□□□□□ -0.52
PACRG-205ENST00000541974 DCBLD2Q96PD2 775 aa11.78□□□□□ -0.52
PACRG-205ENST00000541974 CCDC88BA6NC98 1476 aa11.74□□□□□ -0.53
PACRG-205ENST00000541974 EIF4G1Q04637 1599 aaKnown RBP11.73□□□□□ -0.53
PACRG-205ENST00000541974 BAZ1BQ9UIG0 1483 aaKnown RBP11.73□□□□□ -0.53
PACRG-205ENST00000541974 RTN4Q9NQC3 1192 aaKnown RBP11.72□□□□□ -0.53
PACRG-205ENST00000541974 POTEB2H3BUK9 544 aa11.71□□□□□ -0.53
PACRG-205ENST00000541974 STAG3Q9UJ98 1225 aa11.71□□□□□ -0.53
PACRG-205ENST00000541974 NCAPD3P42695 1498 aa11.7□□□□□ -0.54
PACRG-205ENST00000541974 TRIM41Q8WV44 630 aa11.7□□□□□ -0.54
PACRG-205ENST00000541974 MNX1P50219 401 aaPredicted RBP11.69□□□□□ -0.54
PACRG-205ENST00000541974 OTUD5Q96G74 571 aa11.69□□□□□ -0.54
PACRG-205ENST00000541974 PHF12Q96QT6 1004 aa11.67□□□□□ -0.54
PACRG-205ENST00000541974 HMGXB3Q12766 1538 aa11.66□□□□□ -0.54
PACRG-205ENST00000541974 SPDYE4A6NLX3 237 aa11.66□□□□□ -0.54
PACRG-205ENST00000541974 PELP1Q8IZL8 1130 aaKnown RBP11.62□□□□□ -0.55
PACRG-205ENST00000541974 PLSCR2Q9NRY7 297 aa11.56□□□□□ -0.56
PACRG-205ENST00000541974 CC2D2AQ9P2K1 1620 aa11.53□□□□□ -0.56
PACRG-205ENST00000541974 PAK3O75914 559 aaPredicted RBP11.53□□□□□ -0.56
PACRG-205ENST00000541974 POTEJP0CG39 1038 aa11.51□□□□□ -0.57
PACRG-205ENST00000541974 ASTLQ6HA08 431 aaPredicted RBP11.51□□□□□ -0.57
PACRG-205ENST00000541974 MS4A3Q96HJ5 214 aa11.51□□□□□ -0.57
PACRG-205ENST00000541974 NPM1P06748 294 aaKnown RBP eCLIP11.5□□□□□ -0.57
PACRG-205ENST00000541974 FBXO3Q9UK99 471 aa11.5□□□□□ -0.57
PACRG-205ENST00000541974 ATMINO43313 823 aaPredicted RBP11.47□□□□□ -0.57
PACRG-205ENST00000541974 WRNQ14191 1432 aaPredicted RBP eCLIP11.46□□□□□ -0.57
PACRG-205ENST00000541974 PROM2Q8N271 834 aa11.46□□□□□ -0.57
PACRG-205ENST00000541974 ABCC8Q09428 1581 aa11.45□□□□□ -0.58
PACRG-205ENST00000541974 POTEMA6NI47 508 aa11.45□□□□□ -0.58
PACRG-205ENST00000541974 CFTRP13569 1480 aa11.44□□□□□ -0.58
PACRG-205ENST00000541974 LOC105371045A0A1W2PR82 267 aa11.44□□□□□ -0.58
PACRG-205ENST00000541974 METRNQ9UJH8 293 aa11.44□□□□□ -0.58
PACRG-205ENST00000541974 FAM9AQ8IZU1 332 aaPredicted RBP11.42□□□□□ -0.58
PACRG-205ENST00000541974 EEA1Q15075 1411 aa11.42□□□□□ -0.58
PACRG-205ENST00000541974 CADPSQ9ULU8 1353 aa11.41□□□□□ -0.58
PACRG-205ENST00000541974 POTEGQ6S5H5 508 aa11.41□□□□□ -0.58
PACRG-205ENST00000541974 LCE2DQ5TA82 110 aaPredicted RBP11.39□□□□□ -0.59
PACRG-205ENST00000541974 CCDC61Q9Y6R9 512 aa11.39□□□□□ -0.59
PACRG-205ENST00000541974 C7P10643 843 aa11.38□□□□□ -0.59
PACRG-205ENST00000541974 SLC39A7Q92504 469 aa11.38□□□□□ -0.59
PACRG-205ENST00000541974 PRDM2Q13029 1718 aa11.38□□□□□ -0.59
PACRG-205ENST00000541974 SLC24A1O60721 1099 aa11.36□□□□□ -0.59
PACRG-205ENST00000541974 ATN1P54259 1190 aaPredicted RBP11.35□□□□□ -0.59
PACRG-205ENST00000541974 POTEFA5A3E0 1075 aa11.34□□□□□ -0.59
PACRG-205ENST00000541974 TSPYL2Q9H2G4 693 aaPredicted RBP11.34□□□□□ -0.59
PACRG-205ENST00000541974 TOP2BQ02880 1626 aa11.34□□□□□ -0.59
PACRG-205ENST00000541974 SYNJ1O43426 1573 aa11.33□□□□□ -0.6
PACRG-205ENST00000541974 KIF12Q96FN5 646 aa11.33□□□□□ -0.6
PACRG-205ENST00000541974 TRPC6Q9Y210 931 aa11.33□□□□□ -0.6
PACRG-205ENST00000541974 VASPP50552 380 aaPredicted RBP11.32□□□□□ -0.6
PACRG-205ENST00000541974 BIVM-ERCC5R4GMW8 1640 aa11.31□□□□□ -0.6
PACRG-205ENST00000541974 SOGA1O94964 1423 aa11.3□□□□□ -0.6
PACRG-205ENST00000541974 BMP2KQ9NSY1 1161 aaPredicted RBP11.29□□□□□ -0.6
PACRG-205ENST00000541974 LAMC3Q9Y6N6 1575 aa11.28□□□□□ -0.6
PACRG-205ENST00000541974 FANCD2Q9BXW9 1451 aa11.25□□□□□ -0.61
PACRG-205ENST00000541974 CUX1P39880 1505 aa11.25□□□□□ -0.61
PACRG-205ENST00000541974 MAMSTRQ6ZN01 415 aa11.25□□□□□ -0.61
PACRG-205ENST00000541974 MAP3K13O43283 966 aa11.23□□□□□ -0.61
PACRG-205ENST00000541974 RASEFQ8IZ41 740 aa11.23□□□□□ -0.61
PACRG-205ENST00000541974 PDS5BQ9NTI5 1447 aa11.23□□□□□ -0.61
PACRG-205ENST00000541974 RUSC2Q8N2Y8 1516 aa11.22□□□□□ -0.61
PACRG-205ENST00000541974 PCDH10Q9P2E7 1040 aa11.22□□□□□ -0.61
PACRG-205ENST00000541974 TNIKQ9UKE5 1360 aa11.21□□□□□ -0.61
PACRG-205ENST00000541974 GOLGA3Q08378 1498 aa11.2□□□□□ -0.62
PACRG-205ENST00000541974 CEP164Q9UPV0 1460 aa11.2□□□□□ -0.62
PACRG-205ENST00000541974 KIF27Q86VH2 1401 aa11.2□□□□□ -0.62
PACRG-205ENST00000541974 UBTFP17480 764 aaKnown RBP11.2□□□□□ -0.62
PACRG-205ENST00000541974 TIE1P35590 1138 aa11.2□□□□□ -0.62
PACRG-205ENST00000541974 KIF21BO75037 1637 aa11.18□□□□□ -0.62
PACRG-205ENST00000541974 NESP48681 1621 aa11.18□□□□□ -0.62
PACRG-205ENST00000541974 SCUBE2Q9NQ36 999 aa11.18□□□□□ -0.62
PACRG-205ENST00000541974 COLQQ9Y215 455 aaPredicted RBP11.18□□□□□ -0.62
PACRG-205ENST00000541974 IFNLR1Q8IU57 520 aaPredicted RBP11.17□□□□□ -0.62
PACRG-205ENST00000541974 DNMBPQ6XZF7 1577 aa11.16□□□□□ -0.62
PACRG-205ENST00000541974 TTLL13PA6NNM8 815 aa11.15□□□□□ -0.62
PACRG-205ENST00000541974 FAM163AQ96GL9 167 aaPredicted RBP11.15□□□□□ -0.62
PACRG-205ENST00000541974 FGD5Q6ZNL6 1462 aa11.13□□□□□ -0.63
PACRG-205ENST00000541974 TOPBP1Q92547 1522 aa11.13□□□□□ -0.63
PACRG-205ENST00000541974 ERICH3Q5RHP9 1530 aa11.11□□□□□ -0.63
PACRG-205ENST00000541974 MIER1Q8N108 512 aa11.11□□□□□ -0.63
PACRG-205ENST00000541974 CEP162Q5TB80 1403 aa11.1□□□□□ -0.63
PACRG-205ENST00000541974 CUX2O14529 1486 aa11.1□□□□□ -0.63
PACRG-205ENST00000541974 PRXQ9BXM0 1461 aa11.1□□□□□ -0.63
PACRG-205ENST00000541974 TRIM26Q12899 539 aaPredicted RBP11.09□□□□□ -0.63
PACRG-205ENST00000541974 IGF1RP08069 1367 aa11.07□□□□□ -0.64
PACRG-205ENST00000541974 URB2Q14146 1524 aaKnown RBP11.07□□□□□ -0.64
PACRG-205ENST00000541974 ABCA10Q8WWZ4 1543 aa11.07□□□□□ -0.64
PACRG-205ENST00000541974 POLA1P09884 1462 aaPredicted RBP11.06□□□□□ -0.64
PACRG-205ENST00000541974 RAPGEF2Q9Y4G8 1499 aa11.06□□□□□ -0.64
PACRG-205ENST00000541974 NUBP1P53384 320 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms