RNA–Protein interactions for RNA: ENST00000541948.2

NECAP1-205, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-205ENST00000541948 SHROOM2Q13796 1616 aa13.49□□□□□ -0.25
NECAP1-205ENST00000541948 IGF1RP08069 1367 aa13.45□□□□□ -0.26
NECAP1-205ENST00000541948 RUSC2Q8N2Y8 1516 aa13.44□□□□□ -0.26
NECAP1-205ENST00000541948 KIF27Q86VH2 1401 aa13.41□□□□□ -0.26
NECAP1-205ENST00000541948 CUL7Q14999 1698 aa13.39□□□□□ -0.27
NECAP1-205ENST00000541948 PRG4Q92954 1404 aaPredicted RBP13.34□□□□□ -0.27
NECAP1-205ENST00000541948 JPH4Q96JJ6 628 aa13.33□□□□□ -0.28
NECAP1-205ENST00000541948 CARMIL1Q5VZK9 1371 aa13.32□□□□□ -0.28
NECAP1-205ENST00000541948 KIAA0586Q9BVV6 1533 aa13.31□□□□□ -0.28
NECAP1-205ENST00000541948 TRHP20396 242 aaPredicted RBP13.25□□□□□ -0.29
NECAP1-205ENST00000541948 ADCY10Q96PN6 1610 aa13.24□□□□□ -0.29
NECAP1-205ENST00000541948 RAPGEF2Q9Y4G8 1499 aa13.23□□□□□ -0.29
NECAP1-205ENST00000541948 IQGAP2Q13576 1575 aa13.22□□□□□ -0.29
NECAP1-205ENST00000541948 KIF13AQ9H1H9 1805 aa13.21□□□□□ -0.29
NECAP1-205ENST00000541948 DISP1Q96F81 1524 aa13.2□□□□□ -0.3
NECAP1-205ENST00000541948 PRXQ9BXM0 1461 aa13.19□□□□□ -0.3
NECAP1-205ENST00000541948 CTTNBP2Q8WZ74 1663 aa13.17□□□□□ -0.3
NECAP1-205ENST00000541948 UGGT2Q9NYU1 1516 aa13.17□□□□□ -0.3
NECAP1-205ENST00000541948 KIAA0556O60303 1618 aa13.14□□□□□ -0.31
NECAP1-205ENST00000541948 MAPKBP1O60336 1514 aa13.13□□□□□ -0.31
NECAP1-205ENST00000541948 PTPRGP23470 1445 aa13.12□□□□□ -0.31
NECAP1-205ENST00000541948 DIP2BQ9P265 1576 aa13.11□□□□□ -0.31
NECAP1-205ENST00000541948 TNIKQ9UKE5 1360 aa13.11□□□□□ -0.31
NECAP1-205ENST00000541948 TTBK1Q5TCY1 1321 aaPredicted RBP13.11□□□□□ -0.31
NECAP1-205ENST00000541948 MSH5O43196 834 aa13.1□□□□□ -0.31
NECAP1-205ENST00000541948 CARMIL2Q6F5E8 1435 aa13.09□□□□□ -0.31
NECAP1-205ENST00000541948 ABCC10Q5T3U5 1492 aa13.09□□□□□ -0.31
NECAP1-205ENST00000541948 UHRF1BP1LA0JNW5 1464 aa13.07□□□□□ -0.32
NECAP1-205ENST00000541948 ABCC2Q92887 1545 aa13.07□□□□□ -0.32
NECAP1-205ENST00000541948 CSRNP3Q8WYN3 585 aa13.06□□□□□ -0.32
NECAP1-205ENST00000541948 UACAQ9BZF9 1416 aa13.05□□□□□ -0.32
NECAP1-205ENST00000541948 PLB1Q6P1J6 1458 aa13.04□□□□□ -0.32
NECAP1-205ENST00000541948 ZCCHC11Q5TAX3 1644 aaKnown RBP13.03□□□□□ -0.32
NECAP1-205ENST00000541948 NPM1P06748 294 aaKnown RBP eCLIP13.03□□□□□ -0.32
NECAP1-205ENST00000541948 KDM5BQ9UGL1 1544 aa13.03□□□□□ -0.32
NECAP1-205ENST00000541948 FAM69CQ0P6D2 419 aa13.02□□□□□ -0.33
NECAP1-205ENST00000541948 ABCA8O94911 1581 aa13.02□□□□□ -0.33
NECAP1-205ENST00000541948 PPRC1Q5VV67 1664 aaKnown RBP13.02□□□□□ -0.33
NECAP1-205ENST00000541948 FAM9AQ8IZU1 332 aaPredicted RBP13.01□□□□□ -0.33
NECAP1-205ENST00000541948 ASXL2Q76L83 1435 aa13.01□□□□□ -0.33
NECAP1-205ENST00000541948 SAMD9Q5K651 1589 aa13.01□□□□□ -0.33
NECAP1-205ENST00000541948 TSPOAP1O95153 1857 aa12.99□□□□□ -0.33
NECAP1-205ENST00000541948 EEA1Q15075 1411 aa12.99□□□□□ -0.33
NECAP1-205ENST00000541948 KIF21BO75037 1637 aa12.99□□□□□ -0.33
NECAP1-205ENST00000541948 GOLGA3Q08378 1498 aa12.97□□□□□ -0.33
NECAP1-205ENST00000541948 GLI2P10070 1586 aa12.97□□□□□ -0.33
NECAP1-205ENST00000541948 P3H3Q8IVL6 736 aa12.96□□□□□ -0.33
NECAP1-205ENST00000541948 EPRSP07814 1512 aaKnown RBP12.95□□□□□ -0.34
NECAP1-205ENST00000541948 MAP3K4Q9Y6R4 1608 aa12.94□□□□□ -0.34
NECAP1-205ENST00000541948 KDM6BO15054 1643 aa12.9□□□□□ -0.34
NECAP1-205ENST00000541948 ATP10BO94823 1461 aa12.9□□□□□ -0.34
NECAP1-205ENST00000541948 COL17A1Q9UMD9 1497 aaPredicted RBP12.9□□□□□ -0.34
NECAP1-205ENST00000541948 WDR7Q9Y4E6 1490 aa12.9□□□□□ -0.34
NECAP1-205ENST00000541948 FHOD3Q2V2M9 1422 aa12.89□□□□□ -0.35
NECAP1-205ENST00000541948 RAPGEF6Q8TEU7 1601 aa12.88□□□□□ -0.35
NECAP1-205ENST00000541948 RANGAP1P46060 587 aaPredicted RBP12.88□□□□□ -0.35
NECAP1-205ENST00000541948 EHMT2Q96KQ7 1210 aa12.88□□□□□ -0.35
NECAP1-205ENST00000541948 ARID3CA6NKF2 412 aa12.87□□□□□ -0.35
NECAP1-205ENST00000541948 NUP153P49790 1475 aaKnown RBP12.86□□□□□ -0.35
NECAP1-205ENST00000541948 CFAP43Q8NDM7 1665 aa12.83□□□□□ -0.36
NECAP1-205ENST00000541948 EFCAB5A4FU69 1503 aa12.83□□□□□ -0.36
NECAP1-205ENST00000541948 ARHGAP35Q9NRY4 1499 aa12.82□□□□□ -0.36
NECAP1-205ENST00000541948 KCNH8Q96L42 1107 aa12.8□□□□□ -0.36
NECAP1-205ENST00000541948 MAGI3Q5TCQ9 1506 aa12.79□□□□□ -0.36
NECAP1-205ENST00000541948 ABCA9Q8IUA7 1624 aa12.79□□□□□ -0.36
NECAP1-205ENST00000541948 LRRIQ1Q96JM4 1722 aa12.79□□□□□ -0.36
NECAP1-205ENST00000541948 CD109Q6YHK3 1445 aa12.78□□□□□ -0.36
NECAP1-205ENST00000541948 UBTFP17480 764 aaKnown RBP12.76□□□□□ -0.37
NECAP1-205ENST00000541948 TEX14Q8IWB6 1497 aa12.76□□□□□ -0.37
NECAP1-205ENST00000541948 CDK13Q14004 1512 aaKnown RBP12.76□□□□□ -0.37
NECAP1-205ENST00000541948 KDM4FA0A1W2PPD8 638 aa12.74□□□□□ -0.37
NECAP1-205ENST00000541948 PIAS4Q8N2W9 510 aaPredicted RBP12.74□□□□□ -0.37
NECAP1-205ENST00000541948 TTC37Q6PGP7 1564 aa12.72□□□□□ -0.37
NECAP1-205ENST00000541948 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.72□□□□□ -0.37
NECAP1-205ENST00000541948 FRMPD1Q5SYB0 1578 aa12.69□□□□□ -0.38
NECAP1-205ENST00000541948 ARAP3Q8WWN8 1544 aa12.69□□□□□ -0.38
NECAP1-205ENST00000541948 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.69□□□□□ -0.38
NECAP1-205ENST00000541948 HNRNPUL2Q1KMD3 747 aaKnown RBP12.69□□□□□ -0.38
NECAP1-205ENST00000541948 PCF11O94913 1555 aaKnown RBP12.69□□□□□ -0.38
NECAP1-205ENST00000541948 HECW1Q76N89 1606 aa12.68□□□□□ -0.38
NECAP1-205ENST00000541948 KIF14Q15058 1648 aa12.67□□□□□ -0.38
NECAP1-205ENST00000541948 FMN1Q68DA7 1419 aa12.67□□□□□ -0.38
NECAP1-205ENST00000541948 ADGRL1O94910 1474 aa12.65□□□□□ -0.38
NECAP1-205ENST00000541948 NEO1Q92859 1461 aa12.64□□□□□ -0.39
NECAP1-205ENST00000541948 RICTORQ6R327 1708 aa12.63□□□□□ -0.39
NECAP1-205ENST00000541948 PLEKHD1A6NEE1 506 aa12.63□□□□□ -0.39
NECAP1-205ENST00000541948 PHLDB1Q86UU1 1377 aa12.62□□□□□ -0.39
NECAP1-205ENST00000541948 RAPGEF3O95398 923 aa12.62□□□□□ -0.39
NECAP1-205ENST00000541948 CASKIN1Q8WXD9 1431 aa12.62□□□□□ -0.39
NECAP1-205ENST00000541948 SIGLEC1Q9BZZ2 1709 aa12.61□□□□□ -0.39
NECAP1-205ENST00000541948 CLIP1P30622 1438 aa12.61□□□□□ -0.39
NECAP1-205ENST00000541948 ATP1B4Q9UN42 357 aaPredicted RBP12.6□□□□□ -0.39
NECAP1-205ENST00000541948 FANCAO15360 1455 aa12.59□□□□□ -0.39
NECAP1-205ENST00000541948 PLCH2O75038 1416 aa12.59□□□□□ -0.39
NECAP1-205ENST00000541948 AKNAQ7Z591 1439 aa12.59□□□□□ -0.39
NECAP1-205ENST00000541948 TROQ12816 1431 aaPredicted RBP12.58□□□□□ -0.4
NECAP1-205ENST00000541948 MYO5CQ9NQX4 1742 aa12.58□□□□□ -0.4
NECAP1-205ENST00000541948 CDC42BPBQ9Y5S2 1711 aa12.57□□□□□ -0.4
NECAP1-205ENST00000541948 CFAP74Q9C0B2 1584 aa12.56□□□□□ -0.4
NECAP1-205ENST00000541948 FYCO1Q9BQS8 1478 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms