RNA–Protein interactions for RNA: ENST00000541549.2

EIF3A-203, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3A, Length 4,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-203ENST00000541549 WDR43Q15061 677 aaKnown RBP eCLIP16.03■□□□□ 0.16
EIF3A-203ENST00000541549 B4GALNT3Q6L9W6 998 aa16.03■□□□□ 0.16
EIF3A-203ENST00000541549 RBM19Q9Y4C8 960 aaKnown RBP16.02■□□□□ 0.16
EIF3A-203ENST00000541549 PPP4R2Q9NY27 417 aa16.01■□□□□ 0.15
EIF3A-203ENST00000541549 TNIKQ9UKE5 1360 aa16■□□□□ 0.15
EIF3A-203ENST00000541549 GOLGA3Q08378 1498 aa16■□□□□ 0.15
EIF3A-203ENST00000541549 LAS1LQ9Y4W2 734 aaKnown RBP16■□□□□ 0.15
EIF3A-203ENST00000541549 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16■□□□□ 0.158e-11■■■■□ 20.7
EIF3A-203ENST00000541549 CHGAP10645 457 aaKnown RBP16■□□□□ 0.15
EIF3A-203ENST00000541549 NOP58Q9Y2X3 529 aaKnown RBP15.97■□□□□ 0.15
EIF3A-203ENST00000541549 EEA1Q15075 1411 aa15.96■□□□□ 0.14
EIF3A-203ENST00000541549 DDRGK1Q96HY6 314 aa15.94■□□□□ 0.14
EIF3A-203ENST00000541549 TSHZ2Q9NRE2 1034 aa15.93■□□□□ 0.14
EIF3A-203ENST00000541549 TSPY4P0CV99 314 aa15.91■□□□□ 0.14
EIF3A-203ENST00000541549 TSPY10P0CW01 314 aa15.91■□□□□ 0.14
EIF3A-203ENST00000541549 DEKP35659 375 aaKnown RBP15.9■□□□□ 0.14
EIF3A-203ENST00000541549 PPM1GO15355 546 aaPredicted RBP15.9■□□□□ 0.14
EIF3A-203ENST00000541549 BECN1Q14457 450 aa15.87■□□□□ 0.13
EIF3A-203ENST00000541549 WRNQ14191 1432 aaPredicted RBP eCLIP15.86■□□□□ 0.13
EIF3A-203ENST00000541549 RGL3Q3MIN7 710 aa15.86■□□□□ 0.13
EIF3A-203ENST00000541549 RGS3P49796 1198 aa15.85■□□□□ 0.13
EIF3A-203ENST00000541549 TRIM44Q96DX7 344 aaPredicted RBP15.84■□□□□ 0.13
EIF3A-203ENST00000541549 ERICH6BQ5W0A0 696 aa15.82■□□□□ 0.12
EIF3A-203ENST00000541549 CEP164Q9UPV0 1460 aa15.81■□□□□ 0.12
EIF3A-203ENST00000541549 CCNB3Q8WWL7 1395 aa15.8■□□□□ 0.12
EIF3A-203ENST00000541549 CCER2I3L3R5 266 aa15.8■□□□□ 0.12
EIF3A-203ENST00000541549 SOGA1O94964 1423 aa15.79■□□□□ 0.12
EIF3A-203ENST00000541549 CARD11Q9BXL7 1154 aa15.79■□□□□ 0.12
EIF3A-203ENST00000541549 NEUROD2Q15784 382 aa15.75■□□□□ 0.11
EIF3A-203ENST00000541549 STAG3Q9UJ98 1225 aa15.74■□□□□ 0.11
EIF3A-203ENST00000541549 NAP1L5Q96NT1 182 aaPredicted RBP15.74■□□□□ 0.11
EIF3A-203ENST00000541549 KANK4Q5T7N3 995 aaPredicted RBP15.73■□□□□ 0.11
EIF3A-203ENST00000541549 SENP3Q9H4L4 574 aaPredicted RBP15.73■□□□□ 0.11
EIF3A-203ENST00000541549 NCLP19338 710 aaKnown RBP15.72■□□□□ 0.11
EIF3A-203ENST00000541549 KCNH8Q96L42 1107 aa15.72■□□□□ 0.11
EIF3A-203ENST00000541549 KNSTRNQ9Y448 316 aa15.72■□□□□ 0.11
EIF3A-203ENST00000541549 MYH16Q9H6N6 1097 aa15.71■□□□□ 0.11
EIF3A-203ENST00000541549 TIMELESSQ9UNS1 1208 aa15.71■□□□□ 0.11
EIF3A-203ENST00000541549 GOLGA6L22H0YM25 854 aa15.7■□□□□ 0.1
EIF3A-203ENST00000541549 FRAT1Q92837 279 aaPredicted RBP15.69■□□□□ 0.1
EIF3A-203ENST00000541549 HSPA5P11021 654 aaKnown RBP15.68■□□□□ 0.1
EIF3A-203ENST00000541549 CC2D1BQ5T0F9 858 aaKnown RBP15.68■□□□□ 0.1
EIF3A-203ENST00000541549 KIF27Q86VH2 1401 aa15.67■□□□□ 0.1
EIF3A-203ENST00000541549 CFDP1Q9UEE9 299 aaPredicted RBP15.66■□□□□ 0.1
EIF3A-203ENST00000541549 CECR2Q9BXF3 1484 aa15.66■□□□□ 0.1
EIF3A-203ENST00000541549 RB1CC1Q8TDY2 1594 aa15.66■□□□□ 0.1
EIF3A-203ENST00000541549 FTSJ3Q8IY81 847 aaKnown RBP15.64■□□□□ 0.1
EIF3A-203ENST00000541549 VPS8Q8N3P4 1428 aa15.64■□□□□ 0.1
EIF3A-203ENST00000541549 TPRNQ4KMQ1 711 aa15.62■□□□□ 0.09
EIF3A-203ENST00000541549 PTMAP06454 111 aaKnown RBP15.62■□□□□ 0.09
EIF3A-203ENST00000541549 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.62■□□□□ 0.09
EIF3A-203ENST00000541549 SETD5Q9C0A6 1442 aa15.61■□□□□ 0.09
EIF3A-203ENST00000541549 PLEKHD1A6NEE1 506 aa15.6■□□□□ 0.09
EIF3A-203ENST00000541549 DNTTIP2Q5QJE6 756 aaKnown RBP15.6■□□□□ 0.09
EIF3A-203ENST00000541549 RAB3GAP2Q9H2M9 1393 aa15.6■□□□□ 0.09
EIF3A-203ENST00000541549 FOXD1Q16676 465 aa15.6■□□□□ 0.09
EIF3A-203ENST00000541549 CHMP7Q8WUX9 453 aaPredicted RBP15.6■□□□□ 0.09
EIF3A-203ENST00000541549 TNNT2P45379 298 aaPredicted RBP15.6■□□□□ 0.09
EIF3A-203ENST00000541549 PPP1R15AO75807 674 aaPredicted RBP15.59■□□□□ 0.09
EIF3A-203ENST00000541549 ESF1Q9H501 851 aaKnown RBP15.59■□□□□ 0.09
EIF3A-203ENST00000541549 CDCA8Q53HL2 280 aa15.58■□□□□ 0.08
EIF3A-203ENST00000541549 SPRYD3Q8NCJ5 442 aa15.58■□□□□ 0.08
EIF3A-203ENST00000541549 CFAP53Q96M91 514 aa15.58■□□□□ 0.08
EIF3A-203ENST00000541549 DCAF11Q8TEB1 546 aa15.57■□□□□ 0.08
EIF3A-203ENST00000541549 CCDC88BA6NC98 1476 aa15.57■□□□□ 0.08
EIF3A-203ENST00000541549 PLPPR3Q6T4P5 718 aa15.56■□□□□ 0.08
EIF3A-203ENST00000541549 IPO9Q96P70 1041 aaKnown RBP15.56■□□□□ 0.08
EIF3A-203ENST00000541549 ARID4BQ4LE39 1312 aaPredicted RBP15.55■□□□□ 0.08
EIF3A-203ENST00000541549 RCAN3Q9UKA8 241 aa15.54■□□□□ 0.08
EIF3A-203ENST00000541549 SLKQ9H2G2 1235 aaPredicted RBP15.53■□□□□ 0.08
EIF3A-203ENST00000541549 HSP90AB1P08238 724 aaKnown RBP15.52■□□□□ 0.07
EIF3A-203ENST00000541549 TCERG1O14776 1098 aaKnown RBP15.52■□□□□ 0.07
EIF3A-203ENST00000541549 PLCB2Q00722 1185 aa15.52■□□□□ 0.07
EIF3A-203ENST00000541549 ABCC8Q09428 1581 aa15.51■□□□□ 0.07
EIF3A-203ENST00000541549 NPM1P06748 294 aaKnown RBP eCLIP15.5■□□□□ 0.071e-6■■□□□ 13.4
EIF3A-203ENST00000541549 GZF1Q9H116 711 aaPredicted RBP15.5■□□□□ 0.07
EIF3A-203ENST00000541549 FHAD1B1AJZ9 1412 aa15.49■□□□□ 0.07
EIF3A-203ENST00000541549 BAZ1BQ9UIG0 1483 aaKnown RBP15.48■□□□□ 0.07
EIF3A-203ENST00000541549 L1TD1Q5T7N2 865 aaKnown RBP15.48■□□□□ 0.07
EIF3A-203ENST00000541549 NUDCQ9Y266 331 aa15.48■□□□□ 0.07
EIF3A-203ENST00000541549 MAPK8IP3Q9UPT6 1336 aa15.48■□□□□ 0.07
EIF3A-203ENST00000541549 TMF1P82094 1093 aa15.47■□□□□ 0.07
EIF3A-203ENST00000541549 CARMIL1Q5VZK9 1371 aa15.46■□□□□ 0.07
EIF3A-203ENST00000541549 U2SURPO15042 1029 aaKnown RBP15.46■□□□□ 0.07
EIF3A-203ENST00000541549 HSCBQ8IWL3 235 aa15.46■□□□□ 0.07
EIF3A-203ENST00000541549 DHX57Q6P158 1386 aaKnown RBP15.46■□□□□ 0.07
EIF3A-203ENST00000541549 PLEKHG5O94827 1062 aa15.45■□□□□ 0.06
EIF3A-203ENST00000541549 CASC1Q6TDU7 716 aa15.44■□□□□ 0.06
EIF3A-203ENST00000541549 L3MBTL2Q969R5 705 aa15.44■□□□□ 0.06
EIF3A-203ENST00000541549 PKD2Q13563 968 aa15.43■□□□□ 0.06
EIF3A-203ENST00000541549 MPHOSPH9Q99550 1183 aa15.43■□□□□ 0.06
EIF3A-203ENST00000541549 BAZ1AQ9NRL2 1556 aaPredicted RBP15.43■□□□□ 0.06
EIF3A-203ENST00000541549 PNNQ9H307 717 aaKnown RBP15.43■□□□□ 0.06
EIF3A-203ENST00000541549 MROH2BQ7Z745 1585 aa15.41■□□□□ 0.06
EIF3A-203ENST00000541549 MSNP26038 577 aaKnown RBP15.4■□□□□ 0.06
EIF3A-203ENST00000541549 CUX2O14529 1486 aa15.39■□□□□ 0.05
EIF3A-203ENST00000541549 KTN1Q86UP2 1357 aaKnown RBP15.39■□□□□ 0.05
EIF3A-203ENST00000541549 MS4A1P11836 297 aa15.39■□□□□ 0.05
EIF3A-203ENST00000541549 SLC4A3P48751 1232 aa15.39■□□□□ 0.05
EIF3A-203ENST00000541549 ARHGAP35Q9NRY4 1499 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms