RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 PPARGC1BQ86YN6 1023 aaKnown RBP22.7■■□□□ 1.22
SPOCK3-226ENST00000541354 MAP3K1Q13233 1512 aa22.7■■□□□ 1.22
SPOCK3-226ENST00000541354 EIF4G3O43432 1585 aaKnown RBP22.67■■□□□ 1.22
SPOCK3-226ENST00000541354 MAGI1Q96QZ7 1491 aaPredicted RBP22.65■■□□□ 1.22
SPOCK3-226ENST00000541354 SAMD9Q5K651 1589 aa22.63■■□□□ 1.21
SPOCK3-226ENST00000541354 AQRO60306 1485 aaKnown RBP eCLIP22.63■■□□□ 1.21
SPOCK3-226ENST00000541354 ZNF608Q9ULD9 1512 aaPredicted RBP22.59■■□□□ 1.21
SPOCK3-226ENST00000541354 APLP2Q06481 763 aa22.55■■□□□ 1.2
SPOCK3-226ENST00000541354 IQGAP2Q13576 1575 aa22.52■■□□□ 1.2
SPOCK3-226ENST00000541354 SNAPC4Q5SXM2 1469 aa22.52■■□□□ 1.19
SPOCK3-226ENST00000541354 FYCO1Q9BQS8 1478 aa22.51■■□□□ 1.19
SPOCK3-226ENST00000541354 FMN1Q68DA7 1419 aa22.5■■□□□ 1.19
SPOCK3-226ENST00000541354 SYNJ2O15056 1496 aa22.5■■□□□ 1.19
SPOCK3-226ENST00000541354 UGGT2Q9NYU1 1516 aa22.5■■□□□ 1.19
SPOCK3-226ENST00000541354 CFAP43Q8NDM7 1665 aa22.49■■□□□ 1.19
SPOCK3-226ENST00000541354 GRIN2AQ12879 1464 aa22.48■■□□□ 1.19
SPOCK3-226ENST00000541354 KIAA0586Q9BVV6 1533 aa22.47■■□□□ 1.19
SPOCK3-226ENST00000541354 CASKIN1Q8WXD9 1431 aa22.47■■□□□ 1.19
SPOCK3-226ENST00000541354 TIAM1Q13009 1591 aa22.46■■□□□ 1.19
SPOCK3-226ENST00000541354 PCF11O94913 1555 aaKnown RBP22.42■■□□□ 1.18
SPOCK3-226ENST00000541354 NUP160Q12769 1436 aa22.38■■□□□ 1.17
SPOCK3-226ENST00000541354 FHOD3Q2V2M9 1422 aa22.36■■□□□ 1.17
SPOCK3-226ENST00000541354 RANGAP1P46060 587 aaPredicted RBP22.35■■□□□ 1.17
SPOCK3-226ENST00000541354 LRRC9Q6ZRR7 1453 aa22.32■■□□□ 1.16
SPOCK3-226ENST00000541354 CEP170Q5SW79 1584 aa22.31■■□□□ 1.16
SPOCK3-226ENST00000541354 RRBP1Q9P2E9 1410 aaKnown RBP22.3■■□□□ 1.16
SPOCK3-226ENST00000541354 KIAA0556O60303 1618 aa22.3■■□□□ 1.16
SPOCK3-226ENST00000541354 CCDC18Q5T9S5 1454 aa22.29■■□□□ 1.16
SPOCK3-226ENST00000541354 HECW1Q76N89 1606 aa22.28■■□□□ 1.16
SPOCK3-226ENST00000541354 DISP1Q96F81 1524 aa22.24■■□□□ 1.15
SPOCK3-226ENST00000541354 CHMP7Q8WUX9 453 aaPredicted RBP22.23■■□□□ 1.15
SPOCK3-226ENST00000541354 KANK4Q5T7N3 995 aaPredicted RBP22.2■■□□□ 1.14
SPOCK3-226ENST00000541354 EHBP1L1Q8N3D4 1523 aa22.18■■□□□ 1.14
SPOCK3-226ENST00000541354 LRRIQ1Q96JM4 1722 aa22.17■■□□□ 1.14
SPOCK3-226ENST00000541354 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.17■■□□□ 1.14
SPOCK3-226ENST00000541354 CARMIL2Q6F5E8 1435 aa22.17■■□□□ 1.14
SPOCK3-226ENST00000541354 P3H3Q8IVL6 736 aa22.13■■□□□ 1.13
SPOCK3-226ENST00000541354 CHD1O14646 1710 aa22.13■■□□□ 1.13
SPOCK3-226ENST00000541354 SHROOM2Q13796 1616 aa22.11■■□□□ 1.13
SPOCK3-226ENST00000541354 CCNB3Q8WWL7 1395 aa22.11■■□□□ 1.13
SPOCK3-226ENST00000541354 RAPGEF6Q8TEU7 1601 aa22.11■■□□□ 1.13
SPOCK3-226ENST00000541354 SUPT6HQ7KZ85 1726 aaKnown RBP22.1■■□□□ 1.13
SPOCK3-226ENST00000541354 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.1■■□□□ 1.13
SPOCK3-226ENST00000541354 CCER1Q8TC90 406 aaPredicted RBP22.09■■□□□ 1.13
SPOCK3-226ENST00000541354 EPRSP07814 1512 aaKnown RBP22.08■■□□□ 1.13
SPOCK3-226ENST00000541354 ARHGEF11O15085 1522 aa22.08■■□□□ 1.13
SPOCK3-226ENST00000541354 MTUS2Q5JR59 1369 aa22.02■■□□□ 1.12
SPOCK3-226ENST00000541354 TTBK1Q5TCY1 1321 aaPredicted RBP22.02■■□□□ 1.12
SPOCK3-226ENST00000541354 JPH4Q96JJ6 628 aa22.02■■□□□ 1.12
SPOCK3-226ENST00000541354 PHLDB1Q86UU1 1377 aa22■■□□□ 1.11
SPOCK3-226ENST00000541354 ABCA8O94911 1581 aa21.99■■□□□ 1.11
SPOCK3-226ENST00000541354 NUP153P49790 1475 aaKnown RBP21.98■■□□□ 1.11
SPOCK3-226ENST00000541354 CLASP1Q7Z460 1538 aa21.98■■□□□ 1.11
SPOCK3-226ENST00000541354 NCOA2Q15596 1464 aa21.96■■□□□ 1.11
SPOCK3-226ENST00000541354 FBLN2P98095 1184 aa21.95■■□□□ 1.1
SPOCK3-226ENST00000541354 MYOM3Q5VTT5 1437 aa21.94■■□□□ 1.1
SPOCK3-226ENST00000541354 FGD6Q6ZV73 1430 aa21.94■■□□□ 1.1
SPOCK3-226ENST00000541354 MAGI3Q5TCQ9 1506 aa21.94■■□□□ 1.1
SPOCK3-226ENST00000541354 ADCY10Q96PN6 1610 aa21.94■■□□□ 1.1
SPOCK3-226ENST00000541354 MIA2Q96PC5 1412 aa21.92■■□□□ 1.1
SPOCK3-226ENST00000541354 TCOF1Q13428 1488 aaKnown RBP21.92■■□□□ 1.1
SPOCK3-226ENST00000541354 ATP1B4Q9UN42 357 aaPredicted RBP21.91■■□□□ 1.1
SPOCK3-226ENST00000541354 CLSPNQ9HAW4 1339 aa21.9■■□□□ 1.1
SPOCK3-226ENST00000541354 PRG4Q92954 1404 aaPredicted RBP21.9■■□□□ 1.1
SPOCK3-226ENST00000541354 CDK11AQ9UQ88 783 aaPredicted RBP21.89■■□□□ 1.1
SPOCK3-226ENST00000541354 CDK13Q14004 1512 aaKnown RBP21.88■■□□□ 1.09
SPOCK3-226ENST00000541354 TROQ12816 1431 aaPredicted RBP21.84■■□□□ 1.09
SPOCK3-226ENST00000541354 HNRNPUL2Q1KMD3 747 aaKnown RBP21.84■■□□□ 1.09
SPOCK3-226ENST00000541354 PTPN23Q9H3S7 1636 aa21.84■■□□□ 1.09
SPOCK3-226ENST00000541354 PLB1Q6P1J6 1458 aa21.82■■□□□ 1.08
SPOCK3-226ENST00000541354 ITSN2Q9NZM3 1697 aa21.82■■□□□ 1.08
SPOCK3-226ENST00000541354 PTPRGP23470 1445 aa21.81■■□□□ 1.08
SPOCK3-226ENST00000541354 UHRF1BP1LA0JNW5 1464 aa21.78■■□□□ 1.08
SPOCK3-226ENST00000541354 AKNAQ7Z591 1439 aa21.78■■□□□ 1.08
SPOCK3-226ENST00000541354 SETD5Q9C0A6 1442 aa21.76■■□□□ 1.07
SPOCK3-226ENST00000541354 UACAQ9BZF9 1416 aa21.76■■□□□ 1.07
SPOCK3-226ENST00000541354 ACIN1Q9UKV3 1341 aaKnown RBP21.75■■□□□ 1.07
SPOCK3-226ENST00000541354 ABCC2Q92887 1545 aa21.74■■□□□ 1.07
SPOCK3-226ENST00000541354 ATP10BO94823 1461 aa21.74■■□□□ 1.07
SPOCK3-226ENST00000541354 KIF14Q15058 1648 aa21.72■■□□□ 1.07
SPOCK3-226ENST00000541354 HFM1A2PYH4 1435 aa21.69■■□□□ 1.06
SPOCK3-226ENST00000541354 DHX57Q6P158 1386 aaKnown RBP21.69■■□□□ 1.06
SPOCK3-226ENST00000541354 FAM50AQ14320 339 aaKnown RBP21.68■■□□□ 1.06
SPOCK3-226ENST00000541354 GCC2Q8IWJ2 1684 aa21.67■■□□□ 1.06
SPOCK3-226ENST00000541354 DNMT1P26358 1616 aaKnown RBP21.66■■□□□ 1.06
SPOCK3-226ENST00000541354 ABCC10Q5T3U5 1492 aa21.65■■□□□ 1.06
SPOCK3-226ENST00000541354 RAB3GAP2Q9H2M9 1393 aa21.65■■□□□ 1.06
SPOCK3-226ENST00000541354 PLEKHD1A6NEE1 506 aa21.63■■□□□ 1.05
SPOCK3-226ENST00000541354 ERCC6L2Q5T890 1561 aa21.62■■□□□ 1.05
SPOCK3-226ENST00000541354 ROCK1Q13464 1354 aa21.62■■□□□ 1.05
SPOCK3-226ENST00000541354 GPATCH8Q9UKJ3 1502 aaKnown RBP21.62■■□□□ 1.05
SPOCK3-226ENST00000541354 DIEXFQ68CQ4 756 aaKnown RBP21.61■■□□□ 1.05
SPOCK3-226ENST00000541354 KDM5BQ9UGL1 1544 aa21.6■■□□□ 1.05
SPOCK3-226ENST00000541354 ZNF316A6NFI3 1004 aaPredicted RBP21.59■■□□□ 1.05
SPOCK3-226ENST00000541354 CDC42BPAQ5VT25 1732 aa21.59■■□□□ 1.05
SPOCK3-226ENST00000541354 PTPRKQ15262 1439 aa21.57■■□□□ 1.04
SPOCK3-226ENST00000541354 CROCC2H7BZ55 1655 aa21.56■■□□□ 1.04
SPOCK3-226ENST00000541354 NAIPQ13075 1403 aa21.55■■□□□ 1.04
SPOCK3-226ENST00000541354 PREX2Q70Z35 1606 aa21.55■■□□□ 1.04
SPOCK3-226ENST00000541354 DAPK1P53355 1430 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms