RNA–Protein interactions for RNA: ENST00000540828.6

PTMS-205, Transcript of parathymosin, humanhuman

TSL 1 (best)

Gene PTMS, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMS-205ENST00000540828 PRG4Q92954 1404 aaPredicted RBP36.1■■■■□ 3.37
PTMS-205ENST00000540828 RUSC2Q8N2Y8 1516 aa36.08■■■■□ 3.37
PTMS-205ENST00000540828 KIAA0586Q9BVV6 1533 aa36.06■■■■□ 3.36
PTMS-205ENST00000540828 TRHP20396 242 aaPredicted RBP36.03■■■■□ 3.36
PTMS-205ENST00000540828 RAPGEF2Q9Y4G8 1499 aa35.86■■■■□ 3.33
PTMS-205ENST00000540828 IQGAP2Q13576 1575 aa35.72■■■■□ 3.31
PTMS-205ENST00000540828 CARMIL2Q6F5E8 1435 aa35.67■■■■□ 3.3
PTMS-205ENST00000540828 PRXQ9BXM0 1461 aa35.65■■■■□ 3.3
PTMS-205ENST00000540828 PTPRGP23470 1445 aa35.64■■■■□ 3.3
PTMS-205ENST00000540828 TNIKQ9UKE5 1360 aa35.62■■■■□ 3.29
PTMS-205ENST00000540828 NPM1P06748 294 aaKnown RBP eCLIP35.6■■■■□ 3.29
PTMS-205ENST00000540828 CSRNP3Q8WYN3 585 aa35.57■■■■□ 3.28
PTMS-205ENST00000540828 UGGT2Q9NYU1 1516 aa35.57■■■■□ 3.28
PTMS-205ENST00000540828 ADCY10Q96PN6 1610 aa35.56■■■■□ 3.28
PTMS-205ENST00000540828 DISP1Q96F81 1524 aa35.56■■■■□ 3.28
PTMS-205ENST00000540828 TTBK1Q5TCY1 1321 aaPredicted RBP35.53■■■■□ 3.28
PTMS-205ENST00000540828 EEA1Q15075 1411 aa35.46■■■■□ 3.27
PTMS-205ENST00000540828 CTTNBP2Q8WZ74 1663 aa35.43■■■■□ 3.26
PTMS-205ENST00000540828 MAPKBP1O60336 1514 aa35.43■■■■□ 3.26
PTMS-205ENST00000540828 CHIC1Q5VXU3 224 aa35.39■■■■□ 3.26
PTMS-205ENST00000540828 KIAA0556O60303 1618 aa35.39■■■■□ 3.26
PTMS-205ENST00000540828 UACAQ9BZF9 1416 aa35.37■■■■□ 3.25
PTMS-205ENST00000540828 UHRF1BP1LA0JNW5 1464 aa35.36■■■■□ 3.25
PTMS-205ENST00000540828 ABCC10Q5T3U5 1492 aa35.36■■■■□ 3.25
PTMS-205ENST00000540828 KIF13AQ9H1H9 1805 aa35.35■■■■□ 3.25
PTMS-205ENST00000540828 FAM69CQ0P6D2 419 aa35.35■■■■□ 3.25
PTMS-205ENST00000540828 ABCC2Q92887 1545 aa35.33■■■■□ 3.25
PTMS-205ENST00000540828 GOLGA3Q08378 1498 aa35.33■■■■□ 3.25
PTMS-205ENST00000540828 FAM9AQ8IZU1 332 aaPredicted RBP35.3■■■■□ 3.24
PTMS-205ENST00000540828 DIP2BQ9P265 1576 aa35.23■■■■□ 3.23
PTMS-205ENST00000540828 KDM5BQ9UGL1 1544 aa35.19■■■■□ 3.22
PTMS-205ENST00000540828 ASXL2Q76L83 1435 aa35.16■■■■□ 3.22
PTMS-205ENST00000540828 PLB1Q6P1J6 1458 aa35.16■■■■□ 3.22
PTMS-205ENST00000540828 P3H3Q8IVL6 736 aa35.11■■■■□ 3.21
PTMS-205ENST00000540828 ABCA8O94911 1581 aa35.08■■■■□ 3.21
PTMS-205ENST00000540828 KIF21BO75037 1637 aa35.07■■■■□ 3.21
PTMS-205ENST00000540828 ZCCHC11Q5TAX3 1644 aaKnown RBP35.04■■■■□ 3.2
PTMS-205ENST00000540828 SAMD9Q5K651 1589 aa35.02■■■■□ 3.2
PTMS-205ENST00000540828 GLI2P10070 1586 aa35■■■■□ 3.19
PTMS-205ENST00000540828 EPRSP07814 1512 aaKnown RBP34.96■■■■□ 3.19
PTMS-205ENST00000540828 RANGAP1P46060 587 aaPredicted RBP34.95■■■■□ 3.19
PTMS-205ENST00000540828 TSPOAP1O95153 1857 aa34.93■■■■□ 3.18
PTMS-205ENST00000540828 WDR7Q9Y4E6 1490 aa34.89■■■■□ 3.18
PTMS-205ENST00000540828 UBTFP17480 764 aaKnown RBP34.87■■■■□ 3.17
PTMS-205ENST00000540828 EHMT2Q96KQ7 1210 aa34.85■■■■□ 3.17
PTMS-205ENST00000540828 ATP10BO94823 1461 aa34.83■■■■□ 3.17
PTMS-205ENST00000540828 FHOD3Q2V2M9 1422 aa34.82■■■■□ 3.17
PTMS-205ENST00000540828 ARID3CA6NKF2 412 aa34.8■■■■□ 3.16
PTMS-205ENST00000540828 PPRC1Q5VV67 1664 aaKnown RBP34.79■■■■□ 3.16
PTMS-205ENST00000540828 KCNH8Q96L42 1107 aa34.79■■■■□ 3.16
PTMS-205ENST00000540828 MAP3K4Q9Y6R4 1608 aa34.78■■■■□ 3.16
PTMS-205ENST00000540828 EFCAB5A4FU69 1503 aa34.78■■■■□ 3.16
PTMS-205ENST00000540828 KDM6BO15054 1643 aa34.77■■■■□ 3.16
PTMS-205ENST00000540828 RAPGEF6Q8TEU7 1601 aa34.77■■■■□ 3.16
PTMS-205ENST00000540828 NUP153P49790 1475 aaKnown RBP34.68■■■■□ 3.14
PTMS-205ENST00000540828 TEX14Q8IWB6 1497 aa34.68■■■■□ 3.14
PTMS-205ENST00000540828 CD109Q6YHK3 1445 aa34.66■■■■□ 3.14
PTMS-205ENST00000540828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.64■■■■□ 3.14
PTMS-205ENST00000540828 HNRNPUL2Q1KMD3 747 aaKnown RBP34.64■■■■□ 3.14
PTMS-205ENST00000540828 MAGI3Q5TCQ9 1506 aa34.6■■■■□ 3.13
PTMS-205ENST00000540828 CFAP43Q8NDM7 1665 aa34.6■■■■□ 3.13
PTMS-205ENST00000540828 COL17A1Q9UMD9 1497 aaPredicted RBP34.59■■■■□ 3.13
PTMS-205ENST00000540828 ARHGAP35Q9NRY4 1499 aa34.58■■■■□ 3.13
PTMS-205ENST00000540828 AEBP2Q6ZN18 517 aaPredicted RBP34.53■■■■□ 3.12
PTMS-205ENST00000540828 PLEKHD1A6NEE1 506 aa34.52■■■■□ 3.12
PTMS-205ENST00000540828 FMN1Q68DA7 1419 aa34.5■■■■□ 3.11
PTMS-205ENST00000540828 ABCA9Q8IUA7 1624 aa34.47■■■■□ 3.11
PTMS-205ENST00000540828 ATP1B4Q9UN42 357 aaPredicted RBP34.39■■■■□ 3.1
PTMS-205ENST00000540828 CDK13Q14004 1512 aaKnown RBP34.36■■■■□ 3.09
PTMS-205ENST00000540828 PHLDB1Q86UU1 1377 aa34.36■■■■□ 3.09
PTMS-205ENST00000540828 ARAP3Q8WWN8 1544 aa34.33■■■■□ 3.09
PTMS-205ENST00000540828 HECW1Q76N89 1606 aa34.32■■■■□ 3.08
PTMS-205ENST00000540828 KDM4FA0A1W2PPD8 638 aa34.3■■■■□ 3.08
PTMS-205ENST00000540828 NEO1Q92859 1461 aa34.27■■■■□ 3.08
PTMS-205ENST00000540828 CDK11AQ9UQ88 783 aaPredicted RBP34.26■■■■□ 3.08
PTMS-205ENST00000540828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.25■■■■□ 3.078e-12■■■■■ 36.9
PTMS-205ENST00000540828 CLIP1P30622 1438 aa34.24■■■■□ 3.07
PTMS-205ENST00000540828 CASKIN1Q8WXD9 1431 aa34.21■■■■□ 3.07
PTMS-205ENST00000540828 RAPGEF3O95398 923 aa34.16■■■■□ 3.06
PTMS-205ENST00000540828 TTC37Q6PGP7 1564 aa34.15■■■■□ 3.06
PTMS-205ENST00000540828 TROQ12816 1431 aaPredicted RBP34.13■■■■□ 3.05
PTMS-205ENST00000540828 LRRIQ1Q96JM4 1722 aa34.12■■■■□ 3.05
PTMS-205ENST00000540828 AKNAQ7Z591 1439 aa34.12■■■■□ 3.05
PTMS-205ENST00000540828 FANCAO15360 1455 aa34.11■■■■□ 3.05
PTMS-205ENST00000540828 PCF11O94913 1555 aaKnown RBP34.11■■■■□ 3.05
PTMS-205ENST00000540828 PLCH2O75038 1416 aa34.1■■■■□ 3.05
PTMS-205ENST00000540828 ADGRL1O94910 1474 aa34.07■■■■□ 3.05
PTMS-205ENST00000540828 CCDC18Q5T9S5 1454 aa34.07■■■■□ 3.05
PTMS-205ENST00000540828 FYCO1Q9BQS8 1478 aa34.06■■■■□ 3.04
PTMS-205ENST00000540828 DENND4BO75064 1496 aaPredicted RBP34.04■■■■□ 3.04
PTMS-205ENST00000540828 CFAP74Q9C0B2 1584 aa34.03■■■■□ 3.04
PTMS-205ENST00000540828 KIF14Q15058 1648 aa34.01■■■■□ 3.04
PTMS-205ENST00000540828 FRMPD1Q5SYB0 1578 aa34.01■■■■□ 3.03
PTMS-205ENST00000540828 EFCAB2Q5VUJ9 269 aa34■■■■□ 3.03
PTMS-205ENST00000540828 CEP162Q5TB80 1403 aa33.96■■■■□ 3.03
PTMS-205ENST00000540828 LOC105371045A0A1W2PR82 267 aa33.96■■■■□ 3.03
PTMS-205ENST00000540828 MYO5CQ9NQX4 1742 aa33.93■■■■□ 3.02
PTMS-205ENST00000540828 RICTORQ6R327 1708 aa33.92■■■■□ 3.02
PTMS-205ENST00000540828 SCAPERQ9BY12 1400 aa33.91■■■■□ 3.02
PTMS-205ENST00000540828 ARHGAP5Q13017 1502 aa33.84■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms