RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 KIF27Q86VH2 1401 aa28.49■■■□□ 2.15
TRIM65-203ENST00000540812 KIAA0586Q9BVV6 1533 aa28.4■■■□□ 2.14
TRIM65-203ENST00000540812 CUL7Q14999 1698 aa28.4■■■□□ 2.14
TRIM65-203ENST00000540812 KIF13AQ9H1H9 1805 aa28.34■■■□□ 2.13
TRIM65-203ENST00000540812 CARMIL1Q5VZK9 1371 aa28.31■■■□□ 2.12
TRIM65-203ENST00000540812 ADCY10Q96PN6 1610 aa28.29■■■□□ 2.12
TRIM65-203ENST00000540812 NPM1P06748 294 aaKnown RBP eCLIP28.27■■■□□ 2.12
TRIM65-203ENST00000540812 MAPKBP1O60336 1514 aa28.24■■■□□ 2.11
TRIM65-203ENST00000540812 ABCC10Q5T3U5 1492 aa28.24■■■□□ 2.11
TRIM65-203ENST00000540812 FAM69CQ0P6D2 419 aa28.23■■■□□ 2.11
TRIM65-203ENST00000540812 AEBP2Q6ZN18 517 aaPredicted RBP28.23■■■□□ 2.11
TRIM65-203ENST00000540812 PTPRGP23470 1445 aa28.17■■■□□ 2.1
TRIM65-203ENST00000540812 DIP2BQ9P265 1576 aa28.16■■■□□ 2.1
TRIM65-203ENST00000540812 TTBK1Q5TCY1 1321 aaPredicted RBP28.15■■■□□ 2.1
TRIM65-203ENST00000540812 IQGAP2Q13576 1575 aa28.11■■■□□ 2.09
TRIM65-203ENST00000540812 TNIKQ9UKE5 1360 aa28.11■■■□□ 2.09
TRIM65-203ENST00000540812 CARMIL2Q6F5E8 1435 aa28.1■■■□□ 2.09
TRIM65-203ENST00000540812 RAPGEF2Q9Y4G8 1499 aa28.04■■■□□ 2.08
TRIM65-203ENST00000540812 ABCC2Q92887 1545 aa28.02■■■□□ 2.08
TRIM65-203ENST00000540812 DISP1Q96F81 1524 aa28.02■■■□□ 2.08
TRIM65-203ENST00000540812 TSPOAP1O95153 1857 aa27.95■■■□□ 2.07
TRIM65-203ENST00000540812 UGGT2Q9NYU1 1516 aa27.95■■■□□ 2.06
TRIM65-203ENST00000540812 UHRF1BP1LA0JNW5 1464 aa27.95■■■□□ 2.06
TRIM65-203ENST00000540812 UACAQ9BZF9 1416 aa27.94■■■□□ 2.06
TRIM65-203ENST00000540812 ASXL2Q76L83 1435 aa27.93■■■□□ 2.06
TRIM65-203ENST00000540812 KDM6BO15054 1643 aa27.91■■■□□ 2.06
TRIM65-203ENST00000540812 PLB1Q6P1J6 1458 aa27.89■■■□□ 2.05
TRIM65-203ENST00000540812 KIAA0556O60303 1618 aa27.88■■■□□ 2.05
TRIM65-203ENST00000540812 KDM5BQ9UGL1 1544 aa27.83■■■□□ 2.05
TRIM65-203ENST00000540812 GLI2P10070 1586 aa27.83■■■□□ 2.05
TRIM65-203ENST00000540812 PPRC1Q5VV67 1664 aaKnown RBP27.79■■■□□ 2.04
TRIM65-203ENST00000540812 EPRSP07814 1512 aaKnown RBP27.77■■■□□ 2.04
TRIM65-203ENST00000540812 PRXQ9BXM0 1461 aa27.76■■■□□ 2.04
TRIM65-203ENST00000540812 CTTNBP2Q8WZ74 1663 aa27.76■■■□□ 2.03
TRIM65-203ENST00000540812 ZCCHC11Q5TAX3 1644 aaKnown RBP27.76■■■□□ 2.03
TRIM65-203ENST00000540812 KDM4FA0A1W2PPD8 638 aa27.72■■■□□ 2.03
TRIM65-203ENST00000540812 GOLGA3Q08378 1498 aa27.69■■■□□ 2.02
TRIM65-203ENST00000540812 MAP3K4Q9Y6R4 1608 aa27.67■■■□□ 2.02
TRIM65-203ENST00000540812 COL17A1Q9UMD9 1497 aaPredicted RBP27.65■■■□□ 2.02
TRIM65-203ENST00000540812 ABCA8O94911 1581 aa27.64■■■□□ 2.01
TRIM65-203ENST00000540812 WDR7Q9Y4E6 1490 aa27.64■■■□□ 2.01
TRIM65-203ENST00000540812 TEX14Q8IWB6 1497 aa27.59■■■□□ 2.01
TRIM65-203ENST00000540812 P3H3Q8IVL6 736 aa27.53■■■□□ 2
TRIM65-203ENST00000540812 CSRNP3Q8WYN3 585 aa27.53■■■□□ 2
TRIM65-203ENST00000540812 KCNH8Q96L42 1107 aa27.53■■■□□ 2
TRIM65-203ENST00000540812 CD109Q6YHK3 1445 aa27.49■■□□□ 1.99
TRIM65-203ENST00000540812 ARID3CA6NKF2 412 aa27.48■■□□□ 1.99
TRIM65-203ENST00000540812 MAGI3Q5TCQ9 1506 aa27.46■■□□□ 1.99
TRIM65-203ENST00000540812 ADGRL1O94910 1474 aa27.45■■□□□ 1.99
TRIM65-203ENST00000540812 CFAP43Q8NDM7 1665 aa27.43■■□□□ 1.98
TRIM65-203ENST00000540812 ATP10BO94823 1461 aa27.42■■□□□ 1.98
TRIM65-203ENST00000540812 SAMD9Q5K651 1589 aa27.41■■□□□ 1.98
TRIM65-203ENST00000540812 FAM9AQ8IZU1 332 aaPredicted RBP27.38■■□□□ 1.97
TRIM65-203ENST00000540812 EEA1Q15075 1411 aa27.36■■□□□ 1.97
TRIM65-203ENST00000540812 RANGAP1P46060 587 aaPredicted RBP27.32■■□□□ 1.96
TRIM65-203ENST00000540812 RAPGEF6Q8TEU7 1601 aa27.3■■□□□ 1.96
TRIM65-203ENST00000540812 FHOD3Q2V2M9 1422 aa27.28■■□□□ 1.96
TRIM65-203ENST00000540812 NUP153P49790 1475 aaKnown RBP27.25■■□□□ 1.95
TRIM65-203ENST00000540812 ABCA9Q8IUA7 1624 aa27.24■■□□□ 1.95
TRIM65-203ENST00000540812 ARAP3Q8WWN8 1544 aa27.23■■□□□ 1.95
TRIM65-203ENST00000540812 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.23■■□□□ 1.95
TRIM65-203ENST00000540812 HNRNPUL2Q1KMD3 747 aaKnown RBP27.23■■□□□ 1.95
TRIM65-203ENST00000540812 KIF21BO75037 1637 aa27.17■■□□□ 1.94
TRIM65-203ENST00000540812 PHLDB1Q86UU1 1377 aa27.14■■□□□ 1.94
TRIM65-203ENST00000540812 RAPGEF3O95398 923 aa27.12■■□□□ 1.93
TRIM65-203ENST00000540812 EFCAB5A4FU69 1503 aa27.11■■□□□ 1.93
TRIM65-203ENST00000540812 NEO1Q92859 1461 aa27.11■■□□□ 1.93
TRIM65-203ENST00000540812 HECW2Q9P2P5 1572 aa27.09■■□□□ 1.93
TRIM65-203ENST00000540812 PLEKHD1A6NEE1 506 aa27.07■■□□□ 1.92
TRIM65-203ENST00000540812 EHMT2Q96KQ7 1210 aa27.07■■□□□ 1.92
TRIM65-203ENST00000540812 FRMPD1Q5SYB0 1578 aa27.04■■□□□ 1.92
TRIM65-203ENST00000540812 CHIC1Q5VXU3 224 aa27.01■■□□□ 1.91
TRIM65-203ENST00000540812 UBTFP17480 764 aaKnown RBP27■■□□□ 1.91
TRIM65-203ENST00000540812 CDK13Q14004 1512 aaKnown RBP26.99■■□□□ 1.91
TRIM65-203ENST00000540812 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.99■■□□□ 1.912e-6■■■■■ 29.7
TRIM65-203ENST00000540812 TTC37Q6PGP7 1564 aa26.96■■□□□ 1.91
TRIM65-203ENST00000540812 AKNAQ7Z591 1439 aa26.95■■□□□ 1.9
TRIM65-203ENST00000540812 FANCAO15360 1455 aa26.94■■□□□ 1.9
TRIM65-203ENST00000540812 DENND4BO75064 1496 aaPredicted RBP26.93■■□□□ 1.9
TRIM65-203ENST00000540812 ADAMTSL3P82987 1691 aa26.93■■□□□ 1.9
TRIM65-203ENST00000540812 ARHGAP35Q9NRY4 1499 aa26.92■■□□□ 1.9
TRIM65-203ENST00000540812 ILDR1Q86SU0 546 aaPredicted RBP26.91■■□□□ 1.9
TRIM65-203ENST00000540812 RICTORQ6R327 1708 aa26.9■■□□□ 1.9
TRIM65-203ENST00000540812 PTPRMP28827 1452 aa26.89■■□□□ 1.9
TRIM65-203ENST00000540812 ARHGEF40Q8TER5 1519 aa26.89■■□□□ 1.89
TRIM65-203ENST00000540812 ARID4BQ4LE39 1312 aaPredicted RBP26.89■■□□□ 1.89
TRIM65-203ENST00000540812 ATP1B4Q9UN42 357 aaPredicted RBP26.88■■□□□ 1.89
TRIM65-203ENST00000540812 FMN1Q68DA7 1419 aa26.88■■□□□ 1.89
TRIM65-203ENST00000540812 CFAP74Q9C0B2 1584 aa26.88■■□□□ 1.89
TRIM65-203ENST00000540812 BCORL1Q5H9F3 1711 aa26.87■■□□□ 1.89
TRIM65-203ENST00000540812 HECW1Q76N89 1606 aa26.83■■□□□ 1.89
TRIM65-203ENST00000540812 MADDQ8WXG6 1647 aa26.83■■□□□ 1.88
TRIM65-203ENST00000540812 PLCH2O75038 1416 aa26.82■■□□□ 1.88
TRIM65-203ENST00000540812 ZMYM4Q5VZL5 1548 aa26.8■■□□□ 1.88
TRIM65-203ENST00000540812 YEATS2Q9ULM3 1422 aa26.79■■□□□ 1.88
TRIM65-203ENST00000540812 ZFYVE16Q7Z3T8 1539 aa26.76■■□□□ 1.87
TRIM65-203ENST00000540812 SCAPERQ9BY12 1400 aa26.76■■□□□ 1.87
TRIM65-203ENST00000540812 POGZQ7Z3K3 1410 aa26.75■■□□□ 1.87
TRIM65-203ENST00000540812 KIF14Q15058 1648 aa26.75■■□□□ 1.87
TRIM65-203ENST00000540812 CDK11AQ9UQ88 783 aaPredicted RBP26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms