RNA–Protein interactions for RNA: ENST00000540803.1

RAB35-204, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 2

Gene RAB35, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-204ENST00000540803 JPH4Q96JJ6 628 aa32.72■■■□□ 2.83
RAB35-204ENST00000540803 PRG4Q92954 1404 aaPredicted RBP32.7■■■□□ 2.83
RAB35-204ENST00000540803 KIAA0586Q9BVV6 1533 aa32.69■■■□□ 2.82
RAB35-204ENST00000540803 RAPGEF2Q9Y4G8 1499 aa32.56■■■□□ 2.8
RAB35-204ENST00000540803 TRHP20396 242 aaPredicted RBP32.49■■■□□ 2.79
RAB35-204ENST00000540803 IQGAP2Q13576 1575 aa32.49■■■□□ 2.79
RAB35-204ENST00000540803 PRXQ9BXM0 1461 aa32.39■■■□□ 2.78
RAB35-204ENST00000540803 CTTNBP2Q8WZ74 1663 aa32.34■■■□□ 2.77
RAB35-204ENST00000540803 CARMIL2Q6F5E8 1435 aa32.32■■■□□ 2.76
RAB35-204ENST00000540803 ADCY10Q96PN6 1610 aa32.31■■■□□ 2.76
RAB35-204ENST00000540803 UGGT2Q9NYU1 1516 aa32.31■■■□□ 2.76
RAB35-204ENST00000540803 DISP1Q96F81 1524 aa32.29■■■□□ 2.76
RAB35-204ENST00000540803 TNIKQ9UKE5 1360 aa32.26■■■□□ 2.75
RAB35-204ENST00000540803 PTPRGP23470 1445 aa32.26■■■□□ 2.75
RAB35-204ENST00000540803 CSRNP3Q8WYN3 585 aa32.23■■■□□ 2.75
RAB35-204ENST00000540803 EEA1Q15075 1411 aa32.22■■■□□ 2.75
RAB35-204ENST00000540803 KIAA0556O60303 1618 aa32.2■■■□□ 2.75
RAB35-204ENST00000540803 TTBK1Q5TCY1 1321 aaPredicted RBP32.17■■■□□ 2.74
RAB35-204ENST00000540803 CHIC1Q5VXU3 224 aa32.16■■■□□ 2.74
RAB35-204ENST00000540803 MAPKBP1O60336 1514 aa32.14■■■□□ 2.74
RAB35-204ENST00000540803 KIF13AQ9H1H9 1805 aa32.14■■■□□ 2.74
RAB35-204ENST00000540803 NPM1P06748 294 aaKnown RBP eCLIP32.13■■■□□ 2.73
RAB35-204ENST00000540803 UHRF1BP1LA0JNW5 1464 aa32.05■■■□□ 2.72
RAB35-204ENST00000540803 GOLGA3Q08378 1498 aa32.05■■■□□ 2.72
RAB35-204ENST00000540803 FAM9AQ8IZU1 332 aaPredicted RBP32.05■■■□□ 2.72
RAB35-204ENST00000540803 UACAQ9BZF9 1416 aa32.05■■■□□ 2.72
RAB35-204ENST00000540803 ABCC2Q92887 1545 aa32.04■■■□□ 2.72
RAB35-204ENST00000540803 ABCC10Q5T3U5 1492 aa32.02■■■□□ 2.72
RAB35-204ENST00000540803 DIP2BQ9P265 1576 aa31.99■■■□□ 2.71
RAB35-204ENST00000540803 KIF21BO75037 1637 aa31.97■■■□□ 2.71
RAB35-204ENST00000540803 FAM69CQ0P6D2 419 aa31.92■■■□□ 2.7
RAB35-204ENST00000540803 KDM5BQ9UGL1 1544 aa31.9■■■□□ 2.7
RAB35-204ENST00000540803 PLB1Q6P1J6 1458 aa31.89■■■□□ 2.7
RAB35-204ENST00000540803 SAMD9Q5K651 1589 aa31.89■■■□□ 2.7
RAB35-204ENST00000540803 ZCCHC11Q5TAX3 1644 aaKnown RBP31.87■■■□□ 2.69
RAB35-204ENST00000540803 ABCA8O94911 1581 aa31.86■■■□□ 2.69
RAB35-204ENST00000540803 ASXL2Q76L83 1435 aa31.86■■■□□ 2.69
RAB35-204ENST00000540803 P3H3Q8IVL6 736 aa31.81■■■□□ 2.68
RAB35-204ENST00000540803 TSPOAP1O95153 1857 aa31.76■■■□□ 2.68
RAB35-204ENST00000540803 GLI2P10070 1586 aa31.74■■■□□ 2.67
RAB35-204ENST00000540803 RANGAP1P46060 587 aaPredicted RBP31.7■■■□□ 2.67
RAB35-204ENST00000540803 EPRSP07814 1512 aaKnown RBP31.69■■■□□ 2.66
RAB35-204ENST00000540803 EHMT2Q96KQ7 1210 aa31.67■■■□□ 2.66
RAB35-204ENST00000540803 FHOD3Q2V2M9 1422 aa31.66■■■□□ 2.66
RAB35-204ENST00000540803 WDR7Q9Y4E6 1490 aa31.65■■■□□ 2.66
RAB35-204ENST00000540803 EFCAB5A4FU69 1503 aa31.65■■■□□ 2.66
RAB35-204ENST00000540803 RAPGEF6Q8TEU7 1601 aa31.64■■■□□ 2.65
RAB35-204ENST00000540803 PPRC1Q5VV67 1664 aaKnown RBP31.64■■■□□ 2.65
RAB35-204ENST00000540803 UBTFP17480 764 aaKnown RBP31.62■■■□□ 2.65
RAB35-204ENST00000540803 MAP3K4Q9Y6R4 1608 aa31.61■■■□□ 2.65
RAB35-204ENST00000540803 ATP10BO94823 1461 aa31.58■■■□□ 2.65
RAB35-204ENST00000540803 KDM6BO15054 1643 aa31.54■■■□□ 2.64
RAB35-204ENST00000540803 ARID3CA6NKF2 412 aa31.54■■■□□ 2.64
RAB35-204ENST00000540803 NUP153P49790 1475 aaKnown RBP31.51■■■□□ 2.63
RAB35-204ENST00000540803 ARHGAP35Q9NRY4 1499 aa31.46■■■□□ 2.63
RAB35-204ENST00000540803 CFAP43Q8NDM7 1665 aa31.46■■■□□ 2.63
RAB35-204ENST00000540803 KCNH8Q96L42 1107 aa31.45■■■□□ 2.63
RAB35-204ENST00000540803 TEX14Q8IWB6 1497 aa31.42■■■□□ 2.62
RAB35-204ENST00000540803 CD109Q6YHK3 1445 aa31.38■■■□□ 2.61
RAB35-204ENST00000540803 MAGI3Q5TCQ9 1506 aa31.35■■■□□ 2.61
RAB35-204ENST00000540803 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.35■■■□□ 2.61
RAB35-204ENST00000540803 HNRNPUL2Q1KMD3 747 aaKnown RBP31.35■■■□□ 2.61
RAB35-204ENST00000540803 FMN1Q68DA7 1419 aa31.33■■■□□ 2.61
RAB35-204ENST00000540803 ABCA9Q8IUA7 1624 aa31.32■■■□□ 2.6
RAB35-204ENST00000540803 COL17A1Q9UMD9 1497 aaPredicted RBP31.32■■■□□ 2.6
RAB35-204ENST00000540803 CDK13Q14004 1512 aaKnown RBP31.26■■■□□ 2.59
RAB35-204ENST00000540803 HECW1Q76N89 1606 aa31.26■■■□□ 2.59
RAB35-204ENST00000540803 PLEKHD1A6NEE1 506 aa31.21■■■□□ 2.59
RAB35-204ENST00000540803 LRRIQ1Q96JM4 1722 aa31.16■■■□□ 2.58
RAB35-204ENST00000540803 ATP1B4Q9UN42 357 aaPredicted RBP31.15■■■□□ 2.58
RAB35-204ENST00000540803 CLIP1P30622 1438 aa31.14■■■□□ 2.58
RAB35-204ENST00000540803 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.12■■■□□ 2.571e-6■■■■■ 42.9
RAB35-204ENST00000540803 PCF11O94913 1555 aaKnown RBP31.11■■■□□ 2.57
RAB35-204ENST00000540803 TTC37Q6PGP7 1564 aa31.09■■■□□ 2.57
RAB35-204ENST00000540803 ARAP3Q8WWN8 1544 aa31.09■■■□□ 2.57
RAB35-204ENST00000540803 CASKIN1Q8WXD9 1431 aa31.07■■■□□ 2.57
RAB35-204ENST00000540803 NEO1Q92859 1461 aa31.07■■■□□ 2.56
RAB35-204ENST00000540803 AEBP2Q6ZN18 517 aaPredicted RBP31.06■■■□□ 2.56
RAB35-204ENST00000540803 PHLDB1Q86UU1 1377 aa31.05■■■□□ 2.56
RAB35-204ENST00000540803 CDK11AQ9UQ88 783 aaPredicted RBP31■■■□□ 2.55
RAB35-204ENST00000540803 FYCO1Q9BQS8 1478 aa30.99■■■□□ 2.55
RAB35-204ENST00000540803 KIF14Q15058 1648 aa30.98■■■□□ 2.55
RAB35-204ENST00000540803 CCDC18Q5T9S5 1454 aa30.98■■■□□ 2.55
RAB35-204ENST00000540803 TROQ12816 1431 aaPredicted RBP30.98■■■□□ 2.55
RAB35-204ENST00000540803 CFAP74Q9C0B2 1584 aa30.96■■■□□ 2.55
RAB35-204ENST00000540803 KDM4FA0A1W2PPD8 638 aa30.95■■■□□ 2.55
RAB35-204ENST00000540803 FANCAO15360 1455 aa30.95■■■□□ 2.54
RAB35-204ENST00000540803 CEP162Q5TB80 1403 aa30.93■■■□□ 2.54
RAB35-204ENST00000540803 FRMPD1Q5SYB0 1578 aa30.92■■■□□ 2.54
RAB35-204ENST00000540803 MYO5CQ9NQX4 1742 aa30.92■■■□□ 2.54
RAB35-204ENST00000540803 AKNAQ7Z591 1439 aa30.9■■■□□ 2.54
RAB35-204ENST00000540803 RAPGEF3O95398 923 aa30.9■■■□□ 2.54
RAB35-204ENST00000540803 PLCH2O75038 1416 aa30.9■■■□□ 2.54
RAB35-204ENST00000540803 RICTORQ6R327 1708 aa30.87■■■□□ 2.53
RAB35-204ENST00000540803 ADGRL1O94910 1474 aa30.86■■■□□ 2.53
RAB35-204ENST00000540803 LOC105371045A0A1W2PR82 267 aa30.85■■■□□ 2.53
RAB35-204ENST00000540803 DENND4BO75064 1496 aaPredicted RBP30.83■■■□□ 2.53
RAB35-204ENST00000540803 CDC42BPBQ9Y5S2 1711 aa30.76■■■□□ 2.52
RAB35-204ENST00000540803 ARHGAP5Q13017 1502 aa30.74■■■□□ 2.51
RAB35-204ENST00000540803 EFCAB2Q5VUJ9 269 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms