RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 EHMT2Q96KQ7 1210 aa25.43■■□□□ 1.66
DDB1-218ENST00000540784 ARHGEF11O15085 1522 aa25.42■■□□□ 1.66
DDB1-218ENST00000540784 UBTFP17480 764 aaKnown RBP25.38■■□□□ 1.65
DDB1-218ENST00000540784 PRG4Q92954 1404 aaPredicted RBP25.37■■□□□ 1.65
DDB1-218ENST00000540784 RIMBP3CA6NJZ7 1639 aa25.37■■□□□ 1.65
DDB1-218ENST00000540784 RIMBP3BA6NNM3 1639 aa25.37■■□□□ 1.65
DDB1-218ENST00000540784 KIF21BO75037 1637 aa25.37■■□□□ 1.65
DDB1-218ENST00000540784 RIMBP3Q9UFD9 1639 aa25.37■■□□□ 1.65
DDB1-218ENST00000540784 SHROOM2Q13796 1616 aa25.34■■□□□ 1.65
DDB1-218ENST00000540784 CYB5RLQ6IPT4 315 aa25.34■■□□□ 1.65
DDB1-218ENST00000540784 IQGAP2Q13576 1575 aa25.33■■□□□ 1.65
DDB1-218ENST00000540784 GOLGA3Q08378 1498 aa25.3■■□□□ 1.64
DDB1-218ENST00000540784 CARMIL2Q6F5E8 1435 aa25.27■■□□□ 1.64
DDB1-218ENST00000540784 ERCC6L2Q5T890 1561 aa25.27■■□□□ 1.64
DDB1-218ENST00000540784 CTTNBP2Q8WZ74 1663 aa25.24■■□□□ 1.63
DDB1-218ENST00000540784 ARAP1Q96P48 1450 aa25.23■■□□□ 1.63
DDB1-218ENST00000540784 RANGAP1P46060 587 aaPredicted RBP25.23■■□□□ 1.63
DDB1-218ENST00000540784 UGGT2Q9NYU1 1516 aa25.22■■□□□ 1.63
DDB1-218ENST00000540784 TTBK1Q5TCY1 1321 aaPredicted RBP25.18■■□□□ 1.62
DDB1-218ENST00000540784 DISP1Q96F81 1524 aa25.17■■□□□ 1.62
DDB1-218ENST00000540784 TNIKQ9UKE5 1360 aa25.16■■□□□ 1.62
DDB1-218ENST00000540784 P3H3Q8IVL6 736 aa25.15■■□□□ 1.62
DDB1-218ENST00000540784 PTPRGP23470 1445 aa25.14■■□□□ 1.62
DDB1-218ENST00000540784 LOC105371045A0A1W2PR82 267 aa25.13■■□□□ 1.61
DDB1-218ENST00000540784 KIAA0556O60303 1618 aa25.06■■□□□ 1.6
DDB1-218ENST00000540784 NPM1P06748 294 aaKnown RBP eCLIP24.98■■□□□ 1.59
DDB1-218ENST00000540784 SAMD9Q5K651 1589 aa24.97■■□□□ 1.59
DDB1-218ENST00000540784 EFCAB5A4FU69 1503 aa24.96■■□□□ 1.59
DDB1-218ENST00000540784 UACAQ9BZF9 1416 aa24.95■■□□□ 1.58
DDB1-218ENST00000540784 FHOD3Q2V2M9 1422 aa24.94■■□□□ 1.58
DDB1-218ENST00000540784 ARHGAP35Q9NRY4 1499 aa24.9■■□□□ 1.58
DDB1-218ENST00000540784 CLIP1P30622 1438 aa24.89■■□□□ 1.58
DDB1-218ENST00000540784 UHRF1BP1LA0JNW5 1464 aa24.87■■□□□ 1.57
DDB1-218ENST00000540784 PLB1Q6P1J6 1458 aa24.87■■□□□ 1.57
DDB1-218ENST00000540784 ADCY10Q96PN6 1610 aa24.84■■□□□ 1.57
DDB1-218ENST00000540784 ABCC2Q92887 1545 aa24.82■■□□□ 1.56
DDB1-218ENST00000540784 CEP162Q5TB80 1403 aa24.82■■□□□ 1.56
DDB1-218ENST00000540784 ABCA8O94911 1581 aa24.8■■□□□ 1.56
DDB1-218ENST00000540784 FMN1Q68DA7 1419 aa24.79■■□□□ 1.56
DDB1-218ENST00000540784 ATP1B4Q9UN42 357 aaPredicted RBP24.78■■□□□ 1.56
DDB1-218ENST00000540784 ARID3CA6NKF2 412 aa24.77■■□□□ 1.56
DDB1-218ENST00000540784 TRHP20396 242 aaPredicted RBP24.76■■□□□ 1.55
DDB1-218ENST00000540784 KDM5BQ9UGL1 1544 aa24.73■■□□□ 1.55
DDB1-218ENST00000540784 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.73■■□□□ 1.55
DDB1-218ENST00000540784 HNRNPUL2Q1KMD3 747 aaKnown RBP24.73■■□□□ 1.55
DDB1-218ENST00000540784 RAPGEF6Q8TEU7 1601 aa24.72■■□□□ 1.55
DDB1-218ENST00000540784 ATP10BO94823 1461 aa24.68■■□□□ 1.54
DDB1-218ENST00000540784 NUP153P49790 1475 aaKnown RBP24.65■■□□□ 1.54
DDB1-218ENST00000540784 MAPKBP1O60336 1514 aa24.65■■□□□ 1.54
DDB1-218ENST00000540784 ASXL2Q76L83 1435 aa24.64■■□□□ 1.54
DDB1-218ENST00000540784 ZCCHC11Q5TAX3 1644 aaKnown RBP24.64■■□□□ 1.53
DDB1-218ENST00000540784 CASKIN1Q8WXD9 1431 aa24.62■■□□□ 1.53
DDB1-218ENST00000540784 PLEKHD1A6NEE1 506 aa24.61■■□□□ 1.53
DDB1-218ENST00000540784 FAM69CQ0P6D2 419 aa24.61■■□□□ 1.53
DDB1-218ENST00000540784 KCNH8Q96L42 1107 aa24.6■■□□□ 1.53
DDB1-218ENST00000540784 CDK11AQ9UQ88 783 aaPredicted RBP24.57■■□□□ 1.52
DDB1-218ENST00000540784 HECW1Q76N89 1606 aa24.56■■□□□ 1.52
DDB1-218ENST00000540784 ABCC10Q5T3U5 1492 aa24.56■■□□□ 1.52
DDB1-218ENST00000540784 EPRSP07814 1512 aaKnown RBP24.55■■□□□ 1.52
DDB1-218ENST00000540784 FYCO1Q9BQS8 1478 aa24.53■■□□□ 1.52
DDB1-218ENST00000540784 WDR7Q9Y4E6 1490 aa24.53■■□□□ 1.52
DDB1-218ENST00000540784 PCF11O94913 1555 aaKnown RBP24.51■■□□□ 1.51
DDB1-218ENST00000540784 CDK13Q14004 1512 aaKnown RBP24.51■■□□□ 1.51
DDB1-218ENST00000540784 VPS8Q8N3P4 1428 aa24.5■■□□□ 1.51
DDB1-218ENST00000540784 CCDC18Q5T9S5 1454 aa24.46■■□□□ 1.51
DDB1-218ENST00000540784 DIP2BQ9P265 1576 aa24.44■■□□□ 1.5
DDB1-218ENST00000540784 GLI2P10070 1586 aa24.41■■□□□ 1.5
DDB1-218ENST00000540784 APLP2Q06481 763 aa24.39■■□□□ 1.49
DDB1-218ENST00000540784 KIF13AQ9H1H9 1805 aa24.39■■□□□ 1.49
DDB1-218ENST00000540784 LRRIQ1Q96JM4 1722 aa24.38■■□□□ 1.49
DDB1-218ENST00000540784 TROQ12816 1431 aaPredicted RBP24.36■■□□□ 1.49
DDB1-218ENST00000540784 CD109Q6YHK3 1445 aa24.35■■□□□ 1.49
DDB1-218ENST00000540784 MTUS2Q5JR59 1369 aa24.31■■□□□ 1.48
DDB1-218ENST00000540784 MAP3K4Q9Y6R4 1608 aa24.27■■□□□ 1.48
DDB1-218ENST00000540784 MAGI3Q5TCQ9 1506 aa24.26■■□□□ 1.47
DDB1-218ENST00000540784 ABCA9Q8IUA7 1624 aa24.25■■□□□ 1.47
DDB1-218ENST00000540784 TSPOAP1O95153 1857 aa24.25■■□□□ 1.47
DDB1-218ENST00000540784 MAP3K1Q13233 1512 aa24.25■■□□□ 1.47
DDB1-218ENST00000540784 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.25■■□□□ 1.47
DDB1-218ENST00000540784 CFAP43Q8NDM7 1665 aa24.24■■□□□ 1.47
DDB1-218ENST00000540784 KANK4Q5T7N3 995 aaPredicted RBP24.24■■□□□ 1.47
DDB1-218ENST00000540784 TIAM1Q13009 1591 aa24.23■■□□□ 1.47
DDB1-218ENST00000540784 TEX14Q8IWB6 1497 aa24.22■■□□□ 1.47
DDB1-218ENST00000540784 KIF14Q15058 1648 aa24.21■■□□□ 1.47
DDB1-218ENST00000540784 LRRC9Q6ZRR7 1453 aa24.19■■□□□ 1.46
DDB1-218ENST00000540784 PLCH2O75038 1416 aa24.18■■□□□ 1.46
DDB1-218ENST00000540784 EFCAB2Q5VUJ9 269 aa24.17■■□□□ 1.46
DDB1-218ENST00000540784 EHBP1L1Q8N3D4 1523 aa24.16■■□□□ 1.46
DDB1-218ENST00000540784 TTC37Q6PGP7 1564 aa24.16■■□□□ 1.46
DDB1-218ENST00000540784 PPRC1Q5VV67 1664 aaKnown RBP24.15■■□□□ 1.46
DDB1-218ENST00000540784 PHLDB1Q86UU1 1377 aa24.14■■□□□ 1.45
DDB1-218ENST00000540784 CCNB3Q8WWL7 1395 aa24.14■■□□□ 1.45
DDB1-218ENST00000540784 FANCAO15360 1455 aa24.1■■□□□ 1.45
DDB1-218ENST00000540784 NEO1Q92859 1461 aa24.09■■□□□ 1.45
DDB1-218ENST00000540784 CFDP1Q9UEE9 299 aaPredicted RBP24.09■■□□□ 1.45
DDB1-218ENST00000540784 GPATCH8Q9UKJ3 1502 aaKnown RBP24.08■■□□□ 1.45
DDB1-218ENST00000540784 NCOA2Q15596 1464 aa24.07■■□□□ 1.44
DDB1-218ENST00000540784 ZNF777Q9ULD5 760 aaPredicted RBP24.07■■□□□ 1.44
DDB1-218ENST00000540784 AKNAQ7Z591 1439 aa24.07■■□□□ 1.44
DDB1-218ENST00000540784 ARHGAP5Q13017 1502 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms