RNA–Protein interactions for RNA: ENST00000540781.5

RAP1B-222, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-222	ENST00000540781	RUSC2	Q8N2Y8	1516 aa		33.94	■■■■□ 3.02
RAP1B-222	ENST00000540781	PRG4	Q92954	1404 aa	Predicted RBP	33.9	■■■■□ 3.02
RAP1B-222	ENST00000540781	KIAA0586	Q9BVV6	1533 aa		33.86	■■■■□ 3.01
RAP1B-222	ENST00000540781	TRH	P20396	242 aa	Predicted RBP	33.77	■■■■□ 3
RAP1B-222	ENST00000540781	RAPGEF2	Q9Y4G8	1499 aa		33.73	■■■□□ 2.99
RAP1B-222	ENST00000540781	IQGAP2	Q13576	1575 aa		33.61	■■■□□ 2.97
RAP1B-222	ENST00000540781	CARMIL2	Q6F5E8	1435 aa		33.53	■■■□□ 2.96
RAP1B-222	ENST00000540781	PRX	Q9BXM0	1461 aa		33.5	■■■□□ 2.95
RAP1B-222	ENST00000540781	PTPRG	P23470	1445 aa		33.45	■■■□□ 2.95
RAP1B-222	ENST00000540781	CSRNP3	Q8WYN3	585 aa		33.45	■■■□□ 2.95
RAP1B-222	ENST00000540781	TNIK	Q9UKE5	1360 aa		33.44	■■■□□ 2.94
RAP1B-222	ENST00000540781	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33.43	■■■□□ 2.94
RAP1B-222	ENST00000540781	NPM1	P06748	294 aa	Known RBP eCLIP	33.42	■■■□□ 2.94
RAP1B-222	ENST00000540781	UGGT2	Q9NYU1	1516 aa		33.41	■■■□□ 2.94
RAP1B-222	ENST00000540781	DISP1	Q96F81	1524 aa		33.4	■■■□□ 2.94
RAP1B-222	ENST00000540781	CTTNBP2	Q8WZ74	1663 aa		33.39	■■■□□ 2.94
RAP1B-222	ENST00000540781	ADCY10	Q96PN6	1610 aa		33.39	■■■□□ 2.94
RAP1B-222	ENST00000540781	EEA1	Q15075	1411 aa		33.39	■■■□□ 2.94
RAP1B-222	ENST00000540781	CHIC1	Q5VXU3	224 aa		33.35	■■■□□ 2.93
RAP1B-222	ENST00000540781	FAM9A	Q8IZU1	332 aa	Predicted RBP	33.3	■■■□□ 2.92
RAP1B-222	ENST00000540781	KIAA0556	O60303	1618 aa		33.29	■■■□□ 2.92
RAP1B-222	ENST00000540781	MAPKBP1	O60336	1514 aa		33.24	■■■□□ 2.91
RAP1B-222	ENST00000540781	GOLGA3	Q08378	1498 aa		33.23	■■■□□ 2.91
RAP1B-222	ENST00000540781	UACA	Q9BZF9	1416 aa		33.21	■■■□□ 2.91
RAP1B-222	ENST00000540781	KIF13A	Q9H1H9	1805 aa		33.18	■■■□□ 2.9
RAP1B-222	ENST00000540781	UHRF1BP1L	A0JNW5	1464 aa		33.18	■■■□□ 2.9
RAP1B-222	ENST00000540781	ABCC2	Q92887	1545 aa		33.18	■■■□□ 2.9
RAP1B-222	ENST00000540781	ABCC10	Q5T3U5	1492 aa		33.15	■■■□□ 2.9
RAP1B-222	ENST00000540781	FAM69C	Q0P6D2	419 aa		33.14	■■■□□ 2.9
RAP1B-222	ENST00000540781	DIP2B	Q9P265	1576 aa		33.07	■■■□□ 2.88
RAP1B-222	ENST00000540781	KIF21B	O75037	1637 aa		33.06	■■■□□ 2.88
RAP1B-222	ENST00000540781	P3H3	Q8IVL6	736 aa		33.03	■■■□□ 2.88
RAP1B-222	ENST00000540781	KDM5B	Q9UGL1	1544 aa		33.02	■■■□□ 2.88
RAP1B-222	ENST00000540781	PLB1	Q6P1J6	1458 aa		33.01	■■■□□ 2.88
RAP1B-222	ENST00000540781	ASXL2	Q76L83	1435 aa		33.01	■■■□□ 2.87
RAP1B-222	ENST00000540781	ABCA8	O94911	1581 aa		32.96	■■■□□ 2.87
RAP1B-222	ENST00000540781	RANGAP1	P46060	587 aa	Predicted RBP	32.95	■■■□□ 2.87
RAP1B-222	ENST00000540781	SAMD9	Q5K651	1589 aa		32.95	■■■□□ 2.86
RAP1B-222	ENST00000540781	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.95	■■■□□ 2.86
RAP1B-222	ENST00000540781	EHMT2	Q96KQ7	1210 aa		32.91	■■■□□ 2.86
RAP1B-222	ENST00000540781	UBTF	P17480	764 aa	Known RBP	32.86	■■■□□ 2.85
RAP1B-222	ENST00000540781	TSPOAP1	O95153	1857 aa		32.84	■■■□□ 2.85
RAP1B-222	ENST00000540781	GLI2	P10070	1586 aa		32.83	■■■□□ 2.85
RAP1B-222	ENST00000540781	EPRS	P07814	1512 aa	Known RBP	32.81	■■■□□ 2.84
RAP1B-222	ENST00000540781	FHOD3	Q2V2M9	1422 aa		32.78	■■■□□ 2.84
RAP1B-222	ENST00000540781	WDR7	Q9Y4E6	1490 aa		32.77	■■■□□ 2.84
RAP1B-222	ENST00000540781	ARID3C	A6NKF2	412 aa		32.75	■■■□□ 2.83
RAP1B-222	ENST00000540781	EFCAB5	A4FU69	1503 aa		32.75	■■■□□ 2.83
RAP1B-222	ENST00000540781	RAPGEF6	Q8TEU7	1601 aa		32.72	■■■□□ 2.83
RAP1B-222	ENST00000540781	ATP10B	O94823	1461 aa		32.7	■■■□□ 2.83
RAP1B-222	ENST00000540781	KCNH8	Q96L42	1107 aa		32.68	■■■□□ 2.82
RAP1B-222	ENST00000540781	KDM6B	O15054	1643 aa		32.66	■■■□□ 2.82
RAP1B-222	ENST00000540781	MAP3K4	Q9Y6R4	1608 aa		32.66	■■■□□ 2.82
RAP1B-222	ENST00000540781	PPRC1	Q5VV67	1664 aa	Known RBP	32.66	■■■□□ 2.82
RAP1B-222	ENST00000540781	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.6	■■■□□ 2.81
RAP1B-222	ENST00000540781	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.6	■■■□□ 2.81
RAP1B-222	ENST00000540781	NUP153	P49790	1475 aa	Known RBP	32.6	■■■□□ 2.81
RAP1B-222	ENST00000540781	TEX14	Q8IWB6	1497 aa		32.56	■■■□□ 2.8
RAP1B-222	ENST00000540781	ARHGAP35	Q9NRY4	1499 aa		32.54	■■■□□ 2.8
RAP1B-222	ENST00000540781	CD109	Q6YHK3	1445 aa		32.53	■■■□□ 2.8
RAP1B-222	ENST00000540781	CFAP43	Q8NDM7	1665 aa		32.53	■■■□□ 2.8
RAP1B-222	ENST00000540781	FMN1	Q68DA7	1419 aa		32.47	■■■□□ 2.79
RAP1B-222	ENST00000540781	MAGI3	Q5TCQ9	1506 aa		32.46	■■■□□ 2.79
RAP1B-222	ENST00000540781	PLEKHD1	A6NEE1	506 aa		32.43	■■■□□ 2.78
RAP1B-222	ENST00000540781	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.41	■■■□□ 2.78
RAP1B-222	ENST00000540781	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.4	■■■□□ 2.78
RAP1B-222	ENST00000540781	ABCA9	Q8IUA7	1624 aa		32.39	■■■□□ 2.78
RAP1B-222	ENST00000540781	CDK13	Q14004	1512 aa	Known RBP	32.35	■■■□□ 2.77
RAP1B-222	ENST00000540781	HECW1	Q76N89	1606 aa		32.34	■■■□□ 2.77
RAP1B-222	ENST00000540781	AEBP2	Q6ZN18	517 aa	Predicted RBP	32.33	■■■□□ 2.77
RAP1B-222	ENST00000540781	CLIP1	P30622	1438 aa		32.26	■■■□□ 2.76
RAP1B-222	ENST00000540781	PHLDB1	Q86UU1	1377 aa		32.21	■■■□□ 2.75
RAP1B-222	ENST00000540781	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.21	■■■□□ 2.75
RAP1B-222	ENST00000540781	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.19	■■■□□ 2.74	8e-7	■■□□□ 12.8
RAP1B-222	ENST00000540781	ARAP3	Q8WWN8	1544 aa		32.19	■■■□□ 2.74
RAP1B-222	ENST00000540781	CASKIN1	Q8WXD9	1431 aa		32.18	■■■□□ 2.74
RAP1B-222	ENST00000540781	NEO1	Q92859	1461 aa		32.17	■■■□□ 2.74
RAP1B-222	ENST00000540781	PCF11	O94913	1555 aa	Known RBP	32.15	■■■□□ 2.74
RAP1B-222	ENST00000540781	TTC37	Q6PGP7	1564 aa		32.14	■■■□□ 2.74
RAP1B-222	ENST00000540781	LRRIQ1	Q96JM4	1722 aa		32.14	■■■□□ 2.74
RAP1B-222	ENST00000540781	TRO	Q12816	1431 aa	Predicted RBP	32.09	■■■□□ 2.73
RAP1B-222	ENST00000540781	CCDC18	Q5T9S5	1454 aa		32.08	■■■□□ 2.73
RAP1B-222	ENST00000540781	KDM4F	A0A1W2PPD8	638 aa		32.07	■■■□□ 2.72
RAP1B-222	ENST00000540781	FYCO1	Q9BQS8	1478 aa		32.07	■■■□□ 2.72
RAP1B-222	ENST00000540781	FANCA	O15360	1455 aa		32.05	■■■□□ 2.72
RAP1B-222	ENST00000540781	RAPGEF3	O95398	923 aa		32.05	■■■□□ 2.72
RAP1B-222	ENST00000540781	AKNA	Q7Z591	1439 aa		32.04	■■■□□ 2.72
RAP1B-222	ENST00000540781	CEP162	Q5TB80	1403 aa		32.03	■■■□□ 2.72
RAP1B-222	ENST00000540781	CFAP74	Q9C0B2	1584 aa		32.02	■■■□□ 2.72
RAP1B-222	ENST00000540781	KIF14	Q15058	1648 aa		32.02	■■■□□ 2.72
RAP1B-222	ENST00000540781	PLCH2	O75038	1416 aa		32.01	■■■□□ 2.72
RAP1B-222	ENST00000540781	LOC105371045	A0A1W2PR82	267 aa		32.01	■■■□□ 2.71
RAP1B-222	ENST00000540781	DENND4B	O75064	1496 aa	Predicted RBP	31.97	■■■□□ 2.71
RAP1B-222	ENST00000540781	ADGRL1	O94910	1474 aa		31.96	■■■□□ 2.71
RAP1B-222	ENST00000540781	MYO5C	Q9NQX4	1742 aa		31.95	■■■□□ 2.71
RAP1B-222	ENST00000540781	FRMPD1	Q5SYB0	1578 aa		31.94	■■■□□ 2.7
RAP1B-222	ENST00000540781	EFCAB2	Q5VUJ9	269 aa		31.93	■■■□□ 2.7
RAP1B-222	ENST00000540781	RICTOR	Q6R327	1708 aa		31.88	■■■□□ 2.69
RAP1B-222	ENST00000540781	SCAPER	Q9BY12	1400 aa		31.86	■■■□□ 2.69
RAP1B-222	ENST00000540781	ARHGAP5	Q13017	1502 aa		31.85	■■■□□ 2.69

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms