RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 FAM69CQ0P6D2 419 aa28.18■■■□□ 2.1
UBC-208ENST00000540700 KIF13AQ9H1H9 1805 aa28.18■■■□□ 2.1
UBC-208ENST00000540700 RUSC2Q8N2Y8 1516 aa28.18■■■□□ 2.1
UBC-208ENST00000540700 NPM1P06748 294 aaKnown RBP eCLIP28.13■■■□□ 2.09
UBC-208ENST00000540700 KIF27Q86VH2 1401 aa28.12■■■□□ 2.09
UBC-208ENST00000540700 ABCC10Q5T3U5 1492 aa28.07■■■□□ 2.08
UBC-208ENST00000540700 IGF1RP08069 1367 aa28.03■■■□□ 2.08
UBC-208ENST00000540700 MAPKBP1O60336 1514 aa27.97■■■□□ 2.07
UBC-208ENST00000540700 DIP2BQ9P265 1576 aa27.94■■■□□ 2.06
UBC-208ENST00000540700 ADCY10Q96PN6 1610 aa27.93■■■□□ 2.06
UBC-208ENST00000540700 KDM4FA0A1W2PPD8 638 aa27.92■■■□□ 2.06
UBC-208ENST00000540700 KDM6BO15054 1643 aa27.87■■■□□ 2.05
UBC-208ENST00000540700 TTBK1Q5TCY1 1321 aaPredicted RBP27.87■■■□□ 2.05
UBC-208ENST00000540700 FAM9AQ8IZU1 332 aaPredicted RBP27.86■■■□□ 2.05
UBC-208ENST00000540700 CUL7Q14999 1698 aa27.84■■■□□ 2.05
UBC-208ENST00000540700 EEA1Q15075 1411 aa27.84■■■□□ 2.05
UBC-208ENST00000540700 KIAA0586Q9BVV6 1533 aa27.84■■■□□ 2.05
UBC-208ENST00000540700 CARMIL1Q5VZK9 1371 aa27.84■■■□□ 2.05
UBC-208ENST00000540700 TSPOAP1O95153 1857 aa27.8■■■□□ 2.04
UBC-208ENST00000540700 CSRNP3Q8WYN3 585 aa27.79■■■□□ 2.04
UBC-208ENST00000540700 PRXQ9BXM0 1461 aa27.78■■■□□ 2.04
UBC-208ENST00000540700 PTPRGP23470 1445 aa27.75■■■□□ 2.03
UBC-208ENST00000540700 RAPGEF2Q9Y4G8 1499 aa27.71■■■□□ 2.03
UBC-208ENST00000540700 ILDR1Q86SU0 546 aaPredicted RBP27.65■■■□□ 2.02
UBC-208ENST00000540700 TNIKQ9UKE5 1360 aa27.63■■■□□ 2.01
UBC-208ENST00000540700 ABCC2Q92887 1545 aa27.62■■■□□ 2.01
UBC-208ENST00000540700 ASXL2Q76L83 1435 aa27.62■■■□□ 2.01
UBC-208ENST00000540700 CARMIL2Q6F5E8 1435 aa27.61■■■□□ 2.01
UBC-208ENST00000540700 KIF21BO75037 1637 aa27.59■■■□□ 2.01
UBC-208ENST00000540700 PLB1Q6P1J6 1458 aa27.57■■■□□ 2
UBC-208ENST00000540700 ADGRL1O94910 1474 aa27.53■■■□□ 2
UBC-208ENST00000540700 EHMT2Q96KQ7 1210 aa27.5■■□□□ 1.99
UBC-208ENST00000540700 GLI2P10070 1586 aa27.5■■□□□ 1.99
UBC-208ENST00000540700 UACAQ9BZF9 1416 aa27.5■■□□□ 1.99
UBC-208ENST00000540700 PPRC1Q5VV67 1664 aaKnown RBP27.49■■□□□ 1.99
UBC-208ENST00000540700 IQGAP2Q13576 1575 aa27.48■■□□□ 1.99
UBC-208ENST00000540700 UHRF1BP1LA0JNW5 1464 aa27.47■■□□□ 1.99
UBC-208ENST00000540700 COL17A1Q9UMD9 1497 aaPredicted RBP27.46■■□□□ 1.99
UBC-208ENST00000540700 GOLGA3Q08378 1498 aa27.45■■□□□ 1.99
UBC-208ENST00000540700 EPRSP07814 1512 aaKnown RBP27.42■■□□□ 1.98
UBC-208ENST00000540700 DISP1Q96F81 1524 aa27.42■■□□□ 1.98
UBC-208ENST00000540700 CTTNBP2Q8WZ74 1663 aa27.4■■□□□ 1.98
UBC-208ENST00000540700 KDM5BQ9UGL1 1544 aa27.36■■□□□ 1.97
UBC-208ENST00000540700 TEX14Q8IWB6 1497 aa27.35■■□□□ 1.97
UBC-208ENST00000540700 MAP3K4Q9Y6R4 1608 aa27.33■■□□□ 1.97
UBC-208ENST00000540700 HECW2Q9P2P5 1572 aa27.3■■□□□ 1.96
UBC-208ENST00000540700 ZCCHC11Q5TAX3 1644 aaKnown RBP27.3■■□□□ 1.96
UBC-208ENST00000540700 LOC105371045A0A1W2PR82 267 aa27.29■■□□□ 1.96
UBC-208ENST00000540700 UBTFP17480 764 aaKnown RBP27.29■■□□□ 1.96
UBC-208ENST00000540700 UGGT2Q9NYU1 1516 aa27.29■■□□□ 1.96
UBC-208ENST00000540700 KIAA0556O60303 1618 aa27.23■■□□□ 1.95
UBC-208ENST00000540700 WDR7Q9Y4E6 1490 aa27.23■■□□□ 1.95
UBC-208ENST00000540700 KCNH8Q96L42 1107 aa27.22■■□□□ 1.95
UBC-208ENST00000540700 CD109Q6YHK3 1445 aa27.16■■□□□ 1.94
UBC-208ENST00000540700 RANGAP1P46060 587 aaPredicted RBP27.16■■□□□ 1.94
UBC-208ENST00000540700 SAMD9Q5K651 1589 aa27.14■■□□□ 1.94
UBC-208ENST00000540700 MAGI3Q5TCQ9 1506 aa27.1■■□□□ 1.93
UBC-208ENST00000540700 P3H3Q8IVL6 736 aa27.07■■□□□ 1.92
UBC-208ENST00000540700 ARHGAP35Q9NRY4 1499 aa27.06■■□□□ 1.92
UBC-208ENST00000540700 ARID3CA6NKF2 412 aa27.05■■□□□ 1.92
UBC-208ENST00000540700 EFCAB5A4FU69 1503 aa27.03■■□□□ 1.92
UBC-208ENST00000540700 FHOD3Q2V2M9 1422 aa27.03■■□□□ 1.92
UBC-208ENST00000540700 CFAP43Q8NDM7 1665 aa27.02■■□□□ 1.92
UBC-208ENST00000540700 ABCA8O94911 1581 aa27.01■■□□□ 1.92
UBC-208ENST00000540700 CEP162Q5TB80 1403 aa26.99■■□□□ 1.91
UBC-208ENST00000540700 CLIP1P30622 1438 aa26.98■■□□□ 1.91
UBC-208ENST00000540700 FBXO41Q8TF61 875 aa26.91■■□□□ 1.9
UBC-208ENST00000540700 ARAP3Q8WWN8 1544 aa26.9■■□□□ 1.9
UBC-208ENST00000540700 RAPGEF3O95398 923 aa26.86■■□□□ 1.89
UBC-208ENST00000540700 ATP10BO94823 1461 aa26.85■■□□□ 1.89
UBC-208ENST00000540700 PTPRMP28827 1452 aa26.83■■□□□ 1.89
UBC-208ENST00000540700 ARID4BQ4LE39 1312 aaPredicted RBP26.81■■□□□ 1.88
UBC-208ENST00000540700 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.79■■□□□ 1.88
UBC-208ENST00000540700 HNRNPUL2Q1KMD3 747 aaKnown RBP26.79■■□□□ 1.88
UBC-208ENST00000540700 PHLDB1Q86UU1 1377 aa26.78■■□□□ 1.88
UBC-208ENST00000540700 RAPGEF6Q8TEU7 1601 aa26.76■■□□□ 1.87
UBC-208ENST00000540700 ADAMTSL3P82987 1691 aa26.75■■□□□ 1.87
UBC-208ENST00000540700 FMN1Q68DA7 1419 aa26.74■■□□□ 1.87
UBC-208ENST00000540700 ABCA9Q8IUA7 1624 aa26.74■■□□□ 1.87
UBC-208ENST00000540700 NUP153P49790 1475 aaKnown RBP26.72■■□□□ 1.87
UBC-208ENST00000540700 PCF11O94913 1555 aaKnown RBP26.71■■□□□ 1.87
UBC-208ENST00000540700 NEO1Q92859 1461 aa26.7■■□□□ 1.87
UBC-208ENST00000540700 PLPPR3Q6T4P5 718 aa26.66■■□□□ 1.86
UBC-208ENST00000540700 MADDQ8WXG6 1647 aa26.65■■□□□ 1.86
UBC-208ENST00000540700 CASKIN1Q8WXD9 1431 aa26.65■■□□□ 1.86
UBC-208ENST00000540700 BCORL1Q5H9F3 1711 aa26.64■■□□□ 1.85
UBC-208ENST00000540700 FRMPD1Q5SYB0 1578 aa26.63■■□□□ 1.85
UBC-208ENST00000540700 LMTK3Q96Q04 1460 aa26.62■■□□□ 1.85
UBC-208ENST00000540700 VPS8Q8N3P4 1428 aa26.62■■□□□ 1.85
UBC-208ENST00000540700 LRRIQ1Q96JM4 1722 aa26.62■■□□□ 1.85
UBC-208ENST00000540700 HECW1Q76N89 1606 aa26.61■■□□□ 1.85
UBC-208ENST00000540700 HSPA2P54652 639 aa26.6■■□□□ 1.85
UBC-208ENST00000540700 FYCO1Q9BQS8 1478 aa26.6■■□□□ 1.85
UBC-208ENST00000540700 CDK13Q14004 1512 aaKnown RBP26.6■■□□□ 1.85
UBC-208ENST00000540700 DENND4BO75064 1496 aaPredicted RBP26.56■■□□□ 1.84
UBC-208ENST00000540700 ATP1B4Q9UN42 357 aaPredicted RBP26.56■■□□□ 1.84
UBC-208ENST00000540700 PLEKHD1A6NEE1 506 aa26.55■■□□□ 1.84
UBC-208ENST00000540700 RIMS1Q86UR5 1692 aaKnown RBP26.54■■□□□ 1.84
UBC-208ENST00000540700 ARHGEF40Q8TER5 1519 aa26.53■■□□□ 1.84
UBC-208ENST00000540700 AKNAQ7Z591 1439 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms