RNA–Protein interactions for RNA: ENST00000540472.1

TRPT1-209, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 5

Gene TRPT1, Length 355 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-209ENST00000540472 ERCC6L2Q5T890 1561 aa34.52■■■■□ 3.12
TRPT1-209ENST00000540472 KIAA0586Q9BVV6 1533 aa34.51■■■■□ 3.12
TRPT1-209ENST00000540472 RAPGEF2Q9Y4G8 1499 aa34.5■■■■□ 3.11
TRPT1-209ENST00000540472 PRG4Q92954 1404 aaPredicted RBP34.47■■■■□ 3.11
TRPT1-209ENST00000540472 CHIC1Q5VXU3 224 aa34.4■■■■□ 3.1
TRPT1-209ENST00000540472 PRXQ9BXM0 1461 aa34.33■■■■□ 3.09
TRPT1-209ENST00000540472 EEA1Q15075 1411 aa34.31■■■■□ 3.08
TRPT1-209ENST00000540472 CSRNP3Q8WYN3 585 aa34.31■■■■□ 3.08
TRPT1-209ENST00000540472 IQGAP2Q13576 1575 aa34.31■■■■□ 3.08
TRPT1-209ENST00000540472 FAM9AQ8IZU1 332 aaPredicted RBP34.21■■■■□ 3.07
TRPT1-209ENST00000540472 CARMIL2Q6F5E8 1435 aa34.19■■■■□ 3.06
TRPT1-209ENST00000540472 CTTNBP2Q8WZ74 1663 aa34.14■■■■□ 3.06
TRPT1-209ENST00000540472 UGGT2Q9NYU1 1516 aa34.1■■■■□ 3.05
TRPT1-209ENST00000540472 TRHP20396 242 aaPredicted RBP34.09■■■■□ 3.05
TRPT1-209ENST00000540472 TNIKQ9UKE5 1360 aa34.07■■■■□ 3.04
TRPT1-209ENST00000540472 TTBK1Q5TCY1 1321 aaPredicted RBP34.06■■■■□ 3.04
TRPT1-209ENST00000540472 PTPRGP23470 1445 aa34.06■■■■□ 3.04
TRPT1-209ENST00000540472 DISP1Q96F81 1524 aa34.05■■■■□ 3.04
TRPT1-209ENST00000540472 KIAA0556O60303 1618 aa33.97■■■■□ 3.03
TRPT1-209ENST00000540472 GOLGA3Q08378 1498 aa33.95■■■■□ 3.02
TRPT1-209ENST00000540472 KIF21BO75037 1637 aa33.94■■■■□ 3.02
TRPT1-209ENST00000540472 NPM1P06748 294 aaKnown RBP eCLIP33.94■■■■□ 3.02
TRPT1-209ENST00000540472 ADCY10Q96PN6 1610 aa33.93■■■■□ 3.02
TRPT1-209ENST00000540472 UACAQ9BZF9 1416 aa33.82■■■■□ 3
TRPT1-209ENST00000540472 EHMT2Q96KQ7 1210 aa33.8■■■■□ 3
TRPT1-209ENST00000540472 UHRF1BP1LA0JNW5 1464 aa33.77■■■■□ 3
TRPT1-209ENST00000540472 ABCC2Q92887 1545 aa33.75■■■□□ 2.99
TRPT1-209ENST00000540472 MAPKBP1O60336 1514 aa33.74■■■□□ 2.99
TRPT1-209ENST00000540472 UBTFP17480 764 aaKnown RBP33.74■■■□□ 2.99
TRPT1-209ENST00000540472 RANGAP1P46060 587 aaPredicted RBP33.74■■■□□ 2.99
TRPT1-209ENST00000540472 P3H3Q8IVL6 736 aa33.74■■■□□ 2.99
TRPT1-209ENST00000540472 SAMD9Q5K651 1589 aa33.69■■■□□ 2.98
TRPT1-209ENST00000540472 PLB1Q6P1J6 1458 aa33.66■■■□□ 2.98
TRPT1-209ENST00000540472 ABCC10Q5T3U5 1492 aa33.62■■■□□ 2.97
TRPT1-209ENST00000540472 KDM5BQ9UGL1 1544 aa33.61■■■□□ 2.97
TRPT1-209ENST00000540472 ABCA8O94911 1581 aa33.6■■■□□ 2.97
TRPT1-209ENST00000540472 FAM69CQ0P6D2 419 aa33.59■■■□□ 2.97
TRPT1-209ENST00000540472 KIF13AQ9H1H9 1805 aa33.58■■■□□ 2.97
TRPT1-209ENST00000540472 EFCAB5A4FU69 1503 aa33.56■■■□□ 2.96
TRPT1-209ENST00000540472 ASXL2Q76L83 1435 aa33.55■■■□□ 2.96
TRPT1-209ENST00000540472 DIP2BQ9P265 1576 aa33.55■■■□□ 2.96
TRPT1-209ENST00000540472 FHOD3Q2V2M9 1422 aa33.54■■■□□ 2.96
TRPT1-209ENST00000540472 ZCCHC11Q5TAX3 1644 aaKnown RBP33.54■■■□□ 2.96
TRPT1-209ENST00000540472 RAPGEF6Q8TEU7 1601 aa33.42■■■□□ 2.94
TRPT1-209ENST00000540472 ARID3CA6NKF2 412 aa33.41■■■□□ 2.94
TRPT1-209ENST00000540472 ARHGAP35Q9NRY4 1499 aa33.37■■■□□ 2.93
TRPT1-209ENST00000540472 WDR7Q9Y4E6 1490 aa33.37■■■□□ 2.93
TRPT1-209ENST00000540472 EPRSP07814 1512 aaKnown RBP33.35■■■□□ 2.93
TRPT1-209ENST00000540472 GLI2P10070 1586 aa33.34■■■□□ 2.93
TRPT1-209ENST00000540472 ATP10BO94823 1461 aa33.34■■■□□ 2.93
TRPT1-209ENST00000540472 NUP153P49790 1475 aaKnown RBP33.3■■■□□ 2.92
TRPT1-209ENST00000540472 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.28■■■□□ 2.92
TRPT1-209ENST00000540472 HNRNPUL2Q1KMD3 747 aaKnown RBP33.28■■■□□ 2.92
TRPT1-209ENST00000540472 TSPOAP1O95153 1857 aa33.28■■■□□ 2.92
TRPT1-209ENST00000540472 FMN1Q68DA7 1419 aa33.27■■■□□ 2.92
TRPT1-209ENST00000540472 KCNH8Q96L42 1107 aa33.25■■■□□ 2.91
TRPT1-209ENST00000540472 MAP3K4Q9Y6R4 1608 aa33.17■■■□□ 2.9
TRPT1-209ENST00000540472 ATP1B4Q9UN42 357 aaPredicted RBP33.16■■■□□ 2.9
TRPT1-209ENST00000540472 CLIP1P30622 1438 aa33.16■■■□□ 2.9
TRPT1-209ENST00000540472 PPRC1Q5VV67 1664 aaKnown RBP33.12■■■□□ 2.89
TRPT1-209ENST00000540472 HECW1Q76N89 1606 aa33.11■■■□□ 2.89
TRPT1-209ENST00000540472 PLEKHD1A6NEE1 506 aa33.09■■■□□ 2.89
TRPT1-209ENST00000540472 TEX14Q8IWB6 1497 aa33.09■■■□□ 2.89
TRPT1-209ENST00000540472 CD109Q6YHK3 1445 aa33.09■■■□□ 2.89
TRPT1-209ENST00000540472 CFAP43Q8NDM7 1665 aa33.07■■■□□ 2.89
TRPT1-209ENST00000540472 CDK13Q14004 1512 aaKnown RBP33.07■■■□□ 2.88
TRPT1-209ENST00000540472 KDM6BO15054 1643 aa33.06■■■□□ 2.88
TRPT1-209ENST00000540472 LOC105371045A0A1W2PR82 267 aa33.01■■■□□ 2.87
TRPT1-209ENST00000540472 MAGI3Q5TCQ9 1506 aa33■■■□□ 2.87
TRPT1-209ENST00000540472 CEP162Q5TB80 1403 aa32.98■■■□□ 2.87
TRPT1-209ENST00000540472 CASKIN1Q8WXD9 1431 aa32.98■■■□□ 2.87
TRPT1-209ENST00000540472 ABCA9Q8IUA7 1624 aa32.98■■■□□ 2.87
TRPT1-209ENST00000540472 PCF11O94913 1555 aaKnown RBP32.97■■■□□ 2.87
TRPT1-209ENST00000540472 CDK11AQ9UQ88 783 aaPredicted RBP32.94■■■□□ 2.86
TRPT1-209ENST00000540472 FYCO1Q9BQS8 1478 aa32.9■■■□□ 2.86
TRPT1-209ENST00000540472 CCDC18Q5T9S5 1454 aa32.87■■■□□ 2.85
TRPT1-209ENST00000540472 LRRIQ1Q96JM4 1722 aa32.86■■■□□ 2.85
TRPT1-209ENST00000540472 COL17A1Q9UMD9 1497 aaPredicted RBP32.85■■■□□ 2.85
TRPT1-209ENST00000540472 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.83■■■□□ 2.85
TRPT1-209ENST00000540472 TROQ12816 1431 aaPredicted RBP32.8■■■□□ 2.84
TRPT1-209ENST00000540472 TTC37Q6PGP7 1564 aa32.79■■■□□ 2.84
TRPT1-209ENST00000540472 PHLDB1Q86UU1 1377 aa32.76■■■□□ 2.83
TRPT1-209ENST00000540472 NEO1Q92859 1461 aa32.74■■■□□ 2.83
TRPT1-209ENST00000540472 KIF14Q15058 1648 aa32.74■■■□□ 2.83
TRPT1-209ENST00000540472 ARAP3Q8WWN8 1544 aa32.71■■■□□ 2.83
TRPT1-209ENST00000540472 FANCAO15360 1455 aa32.67■■■□□ 2.82
TRPT1-209ENST00000540472 CFAP74Q9C0B2 1584 aa32.66■■■□□ 2.82
TRPT1-209ENST00000540472 PLCH2O75038 1416 aa32.65■■■□□ 2.82
TRPT1-209ENST00000540472 AKNAQ7Z591 1439 aa32.62■■■□□ 2.81
TRPT1-209ENST00000540472 MYO5CQ9NQX4 1742 aa32.61■■■□□ 2.81
TRPT1-209ENST00000540472 VPS8Q8N3P4 1428 aa32.59■■■□□ 2.81
TRPT1-209ENST00000540472 RAPGEF3O95398 923 aa32.58■■■□□ 2.81
TRPT1-209ENST00000540472 EFCAB2Q5VUJ9 269 aa32.57■■■□□ 2.8
TRPT1-209ENST00000540472 MTUS2Q5JR59 1369 aa32.56■■■□□ 2.8
TRPT1-209ENST00000540472 DENND4BO75064 1496 aaPredicted RBP32.54■■■□□ 2.8
TRPT1-209ENST00000540472 ARHGAP5Q13017 1502 aa32.53■■■□□ 2.8
TRPT1-209ENST00000540472 ADGRL1O94910 1474 aa32.5■■■□□ 2.79
TRPT1-209ENST00000540472 FRMPD1Q5SYB0 1578 aa32.48■■■□□ 2.79
TRPT1-209ENST00000540472 SCAPERQ9BY12 1400 aa32.46■■■□□ 2.79
TRPT1-209ENST00000540472 AEBP2Q6ZN18 517 aaPredicted RBP32.46■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms