RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 ARHGAP35Q9NRY4 1499 aa12.93□□□□□ -0.34
C2CD3-215ENST00000540452 TDRD9Q8NDG6 1382 aaKnown RBP12.91□□□□□ -0.34
C2CD3-215ENST00000540452 PCGF6Q9BYE7 350 aa12.9□□□□□ -0.34
C2CD3-215ENST00000540452 AQRO60306 1485 aaKnown RBP eCLIP12.89□□□□□ -0.35
C2CD3-215ENST00000540452 MAGI1Q96QZ7 1491 aaPredicted RBP12.89□□□□□ -0.35
C2CD3-215ENST00000540452 EIF4G3O43432 1585 aaKnown RBP12.89□□□□□ -0.35
C2CD3-215ENST00000540452 SAMD9Q5K651 1589 aa12.88□□□□□ -0.35
C2CD3-215ENST00000540452 APLP2Q06481 763 aa12.84□□□□□ -0.35
C2CD3-215ENST00000540452 FMN1Q68DA7 1419 aa12.83□□□□□ -0.36
C2CD3-215ENST00000540452 FYCO1Q9BQS8 1478 aa12.83□□□□□ -0.36
C2CD3-215ENST00000540452 IQGAP2Q13576 1575 aa12.82□□□□□ -0.36
C2CD3-215ENST00000540452 CFAP43Q8NDM7 1665 aa12.8□□□□□ -0.36
C2CD3-215ENST00000540452 UGGT2Q9NYU1 1516 aa12.8□□□□□ -0.36
C2CD3-215ENST00000540452 ZNF608Q9ULD9 1512 aaPredicted RBP12.8□□□□□ -0.36
C2CD3-215ENST00000540452 SYNJ2O15056 1496 aa12.79□□□□□ -0.36
C2CD3-215ENST00000540452 GRIN2AQ12879 1464 aa12.78□□□□□ -0.36
C2CD3-215ENST00000540452 KIAA0586Q9BVV6 1533 aa12.78□□□□□ -0.36
C2CD3-215ENST00000540452 TIAM1Q13009 1591 aa12.78□□□□□ -0.36
C2CD3-215ENST00000540452 CASKIN1Q8WXD9 1431 aa12.78□□□□□ -0.36
C2CD3-215ENST00000540452 SNAPC4Q5SXM2 1469 aa12.78□□□□□ -0.36
C2CD3-215ENST00000540452 HRCP23327 699 aa12.76□□□□□ -0.37
C2CD3-215ENST00000540452 PCF11O94913 1555 aaKnown RBP12.74□□□□□ -0.37
C2CD3-215ENST00000540452 ZEB1P37275 1124 aaPredicted RBP12.72□□□□□ -0.37
C2CD3-215ENST00000540452 NUP160Q12769 1436 aa12.71□□□□□ -0.37
C2CD3-215ENST00000540452 CCDC18Q5T9S5 1454 aa12.7□□□□□ -0.38
C2CD3-215ENST00000540452 LRRC9Q6ZRR7 1453 aa12.7□□□□□ -0.38
C2CD3-215ENST00000540452 FHOD3Q2V2M9 1422 aa12.7□□□□□ -0.38
C2CD3-215ENST00000540452 RRBP1Q9P2E9 1410 aaKnown RBP12.7□□□□□ -0.38
C2CD3-215ENST00000540452 HECW1Q76N89 1606 aa12.69□□□□□ -0.38
C2CD3-215ENST00000540452 KIAA0556O60303 1618 aa12.68□□□□□ -0.38
C2CD3-215ENST00000540452 CEP170Q5SW79 1584 aa12.66□□□□□ -0.38
C2CD3-215ENST00000540452 RANGAP1P46060 587 aaPredicted RBP12.64□□□□□ -0.39
C2CD3-215ENST00000540452 OSCARQ8IYS5 282 aa12.64□□□□□ -0.39
C2CD3-215ENST00000540452 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.64□□□□□ -0.39
C2CD3-215ENST00000540452 EHBP1L1Q8N3D4 1523 aa12.63□□□□□ -0.39
C2CD3-215ENST00000540452 DISP1Q96F81 1524 aa12.63□□□□□ -0.39
C2CD3-215ENST00000540452 CHMP7Q8WUX9 453 aaPredicted RBP12.62□□□□□ -0.39
C2CD3-215ENST00000540452 CARMIL2Q6F5E8 1435 aa12.62□□□□□ -0.39
C2CD3-215ENST00000540452 LRRIQ1Q96JM4 1722 aa12.59□□□□□ -0.39
C2CD3-215ENST00000540452 PPARGC1BQ86YN6 1023 aaKnown RBP12.59□□□□□ -0.39
C2CD3-215ENST00000540452 SUPT6HQ7KZ85 1726 aaKnown RBP12.59□□□□□ -0.39
C2CD3-215ENST00000540452 CCNB3Q8WWL7 1395 aa12.58□□□□□ -0.4
C2CD3-215ENST00000540452 KANK4Q5T7N3 995 aaPredicted RBP12.58□□□□□ -0.4
C2CD3-215ENST00000540452 SHROOM2Q13796 1616 aa12.58□□□□□ -0.4
C2CD3-215ENST00000540452 RAPGEF6Q8TEU7 1601 aa12.57□□□□□ -0.4
C2CD3-215ENST00000540452 CHD1O14646 1710 aa12.57□□□□□ -0.4
C2CD3-215ENST00000540452 ARHGEF11O15085 1522 aa12.56□□□□□ -0.4
C2CD3-215ENST00000540452 EPRSP07814 1512 aaKnown RBP12.56□□□□□ -0.4
C2CD3-215ENST00000540452 MTUS2Q5JR59 1369 aa12.54□□□□□ -0.4
C2CD3-215ENST00000540452 TRHP20396 242 aaPredicted RBP12.53□□□□□ -0.4
C2CD3-215ENST00000540452 CLSPNQ9HAW4 1339 aa12.53□□□□□ -0.4
C2CD3-215ENST00000540452 P3H3Q8IVL6 736 aa12.52□□□□□ -0.41
C2CD3-215ENST00000540452 JPH4Q96JJ6 628 aa12.5□□□□□ -0.41
C2CD3-215ENST00000540452 PHLDB1Q86UU1 1377 aa12.5□□□□□ -0.41
C2CD3-215ENST00000540452 ADCY10Q96PN6 1610 aa12.49□□□□□ -0.41
C2CD3-215ENST00000540452 ABCA8O94911 1581 aa12.49□□□□□ -0.41
C2CD3-215ENST00000540452 NUP153P49790 1475 aaKnown RBP12.49□□□□□ -0.41
C2CD3-215ENST00000540452 MYOM3Q5VTT5 1437 aa12.49□□□□□ -0.41
C2CD3-215ENST00000540452 FGD6Q6ZV73 1430 aa12.49□□□□□ -0.41
C2CD3-215ENST00000540452 CLASP1Q7Z460 1538 aa12.48□□□□□ -0.41
C2CD3-215ENST00000540452 NCOA2Q15596 1464 aa12.48□□□□□ -0.41
C2CD3-215ENST00000540452 MIA2Q96PC5 1412 aa12.48□□□□□ -0.41
C2CD3-215ENST00000540452 CDK11AQ9UQ88 783 aaPredicted RBP12.47□□□□□ -0.41
C2CD3-215ENST00000540452 TCOF1Q13428 1488 aaKnown RBP12.46□□□□□ -0.41
C2CD3-215ENST00000540452 TTBK1Q5TCY1 1321 aaPredicted RBP12.46□□□□□ -0.41
C2CD3-215ENST00000540452 ACIN1Q9UKV3 1341 aaKnown RBP12.45□□□□□ -0.42
C2CD3-215ENST00000540452 MAGI3Q5TCQ9 1506 aa12.45□□□□□ -0.42
C2CD3-215ENST00000540452 FBLN2P98095 1184 aa12.44□□□□□ -0.42
C2CD3-215ENST00000540452 ITSN2Q9NZM3 1697 aa12.44□□□□□ -0.42
C2CD3-215ENST00000540452 CCER1Q8TC90 406 aaPredicted RBP12.43□□□□□ -0.42
C2CD3-215ENST00000540452 AKNAQ7Z591 1439 aa12.43□□□□□ -0.42
C2CD3-215ENST00000540452 PRG4Q92954 1404 aaPredicted RBP12.43□□□□□ -0.42
C2CD3-215ENST00000540452 CDK13Q14004 1512 aaKnown RBP12.42□□□□□ -0.42
C2CD3-215ENST00000540452 PTPN23Q9H3S7 1636 aa12.42□□□□□ -0.42
C2CD3-215ENST00000540452 FOXD1Q16676 465 aa12.42□□□□□ -0.42
C2CD3-215ENST00000540452 ATP1B4Q9UN42 357 aaPredicted RBP12.42□□□□□ -0.42
C2CD3-215ENST00000540452 TROQ12816 1431 aaPredicted RBP12.42□□□□□ -0.42
C2CD3-215ENST00000540452 PLB1Q6P1J6 1458 aa12.4□□□□□ -0.43
C2CD3-215ENST00000540452 HNRNPUL2Q1KMD3 747 aaKnown RBP12.39□□□□□ -0.43
C2CD3-215ENST00000540452 PTPRGP23470 1445 aa12.38□□□□□ -0.43
C2CD3-215ENST00000540452 UHRF1BP1LA0JNW5 1464 aa12.38□□□□□ -0.43
C2CD3-215ENST00000540452 SETD5Q9C0A6 1442 aa12.37□□□□□ -0.43
C2CD3-215ENST00000540452 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.37□□□□□ -0.43
C2CD3-215ENST00000540452 KIF14Q15058 1648 aa12.37□□□□□ -0.43
C2CD3-215ENST00000540452 HFM1A2PYH4 1435 aa12.37□□□□□ -0.43
C2CD3-215ENST00000540452 RIMBP3CA6NJZ7 1639 aa12.36□□□□□ -0.43
C2CD3-215ENST00000540452 RIMBP3BA6NNM3 1639 aa12.36□□□□□ -0.43
C2CD3-215ENST00000540452 RIMBP3Q9UFD9 1639 aa12.36□□□□□ -0.43
C2CD3-215ENST00000540452 ABCC2Q92887 1545 aa12.36□□□□□ -0.43
C2CD3-215ENST00000540452 UACAQ9BZF9 1416 aa12.36□□□□□ -0.43
C2CD3-215ENST00000540452 GCC2Q8IWJ2 1684 aa12.35□□□□□ -0.43
C2CD3-215ENST00000540452 CYB5RLQ6IPT4 315 aa12.34□□□□□ -0.43
C2CD3-215ENST00000540452 ATP10BO94823 1461 aa12.34□□□□□ -0.43
C2CD3-215ENST00000540452 DHX57Q6P158 1386 aaKnown RBP12.33□□□□□ -0.44
C2CD3-215ENST00000540452 DNMT1P26358 1616 aaKnown RBP12.33□□□□□ -0.44
C2CD3-215ENST00000540452 ROCK1Q13464 1354 aa12.31□□□□□ -0.44
C2CD3-215ENST00000540452 RAB3GAP2Q9H2M9 1393 aa12.31□□□□□ -0.44
C2CD3-215ENST00000540452 FAM50AQ14320 339 aaKnown RBP12.31□□□□□ -0.44
C2CD3-215ENST00000540452 PLPPR3Q6T4P5 718 aa12.31□□□□□ -0.44
C2CD3-215ENST00000540452 ABCC10Q5T3U5 1492 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms