RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 JPH4Q96JJ6 628 aa30.91■■■□□ 2.54
SNRPA1-203ENST00000540017 CHIC1Q5VXU3 224 aa30.9■■■□□ 2.54
SNRPA1-203ENST00000540017 KIAA0586Q9BVV6 1533 aa30.89■■■□□ 2.54
SNRPA1-203ENST00000540017 RAPGEF2Q9Y4G8 1499 aa30.88■■■□□ 2.53
SNRPA1-203ENST00000540017 PRG4Q92954 1404 aaPredicted RBP30.86■■■□□ 2.53
SNRPA1-203ENST00000540017 PRXQ9BXM0 1461 aa30.78■■■□□ 2.52
SNRPA1-203ENST00000540017 CSRNP3Q8WYN3 585 aa30.73■■■□□ 2.51
SNRPA1-203ENST00000540017 IQGAP2Q13576 1575 aa30.71■■■□□ 2.51
SNRPA1-203ENST00000540017 EEA1Q15075 1411 aa30.68■■■□□ 2.5
SNRPA1-203ENST00000540017 FAM9AQ8IZU1 332 aaPredicted RBP30.66■■■□□ 2.5
SNRPA1-203ENST00000540017 CTTNBP2Q8WZ74 1663 aa30.57■■■□□ 2.48
SNRPA1-203ENST00000540017 UGGT2Q9NYU1 1516 aa30.55■■■□□ 2.48
SNRPA1-203ENST00000540017 DISP1Q96F81 1524 aa30.54■■■□□ 2.48
SNRPA1-203ENST00000540017 CARMIL2Q6F5E8 1435 aa30.53■■■□□ 2.48
SNRPA1-203ENST00000540017 TNIKQ9UKE5 1360 aa30.47■■■□□ 2.47
SNRPA1-203ENST00000540017 PTPRGP23470 1445 aa30.47■■■□□ 2.47
SNRPA1-203ENST00000540017 TTBK1Q5TCY1 1321 aaPredicted RBP30.46■■■□□ 2.47
SNRPA1-203ENST00000540017 KIAA0556O60303 1618 aa30.43■■■□□ 2.46
SNRPA1-203ENST00000540017 KIF21BO75037 1637 aa30.41■■■□□ 2.46
SNRPA1-203ENST00000540017 ADCY10Q96PN6 1610 aa30.41■■■□□ 2.46
SNRPA1-203ENST00000540017 TRHP20396 242 aaPredicted RBP30.41■■■□□ 2.46
SNRPA1-203ENST00000540017 GOLGA3Q08378 1498 aa30.32■■■□□ 2.44
SNRPA1-203ENST00000540017 EHMT2Q96KQ7 1210 aa30.3■■■□□ 2.44
SNRPA1-203ENST00000540017 UACAQ9BZF9 1416 aa30.25■■■□□ 2.43
SNRPA1-203ENST00000540017 NPM1P06748 294 aaKnown RBP eCLIP30.25■■■□□ 2.43
SNRPA1-203ENST00000540017 P3H3Q8IVL6 736 aa30.23■■■□□ 2.43
SNRPA1-203ENST00000540017 UHRF1BP1LA0JNW5 1464 aa30.23■■■□□ 2.43
SNRPA1-203ENST00000540017 SAMD9Q5K651 1589 aa30.2■■■□□ 2.43
SNRPA1-203ENST00000540017 RANGAP1P46060 587 aaPredicted RBP30.2■■■□□ 2.43
SNRPA1-203ENST00000540017 ABCC2Q92887 1545 aa30.2■■■□□ 2.42
SNRPA1-203ENST00000540017 MAPKBP1O60336 1514 aa30.19■■■□□ 2.42
SNRPA1-203ENST00000540017 PLB1Q6P1J6 1458 aa30.18■■■□□ 2.42
SNRPA1-203ENST00000540017 UBTFP17480 764 aaKnown RBP30.17■■■□□ 2.42
SNRPA1-203ENST00000540017 ABCA8O94911 1581 aa30.11■■■□□ 2.41
SNRPA1-203ENST00000540017 KDM5BQ9UGL1 1544 aa30.1■■■□□ 2.41
SNRPA1-203ENST00000540017 KIF13AQ9H1H9 1805 aa30.1■■■□□ 2.41
SNRPA1-203ENST00000540017 ABCC10Q5T3U5 1492 aa30.08■■■□□ 2.41
SNRPA1-203ENST00000540017 FHOD3Q2V2M9 1422 aa30.05■■■□□ 2.4
SNRPA1-203ENST00000540017 ZCCHC11Q5TAX3 1644 aaKnown RBP30.04■■■□□ 2.4
SNRPA1-203ENST00000540017 DIP2BQ9P265 1576 aa30.03■■■□□ 2.4
SNRPA1-203ENST00000540017 FAM69CQ0P6D2 419 aa30.03■■■□□ 2.4
SNRPA1-203ENST00000540017 ASXL2Q76L83 1435 aa30.03■■■□□ 2.4
SNRPA1-203ENST00000540017 EFCAB5A4FU69 1503 aa30.01■■■□□ 2.39
SNRPA1-203ENST00000540017 ARHGAP35Q9NRY4 1499 aa29.93■■■□□ 2.38
SNRPA1-203ENST00000540017 RAPGEF6Q8TEU7 1601 aa29.93■■■□□ 2.38
SNRPA1-203ENST00000540017 ARID3CA6NKF2 412 aa29.92■■■□□ 2.38
SNRPA1-203ENST00000540017 ATP10BO94823 1461 aa29.88■■■□□ 2.37
SNRPA1-203ENST00000540017 EPRSP07814 1512 aaKnown RBP29.86■■■□□ 2.37
SNRPA1-203ENST00000540017 NUP153P49790 1475 aaKnown RBP29.85■■■□□ 2.37
SNRPA1-203ENST00000540017 WDR7Q9Y4E6 1490 aa29.85■■■□□ 2.37
SNRPA1-203ENST00000540017 GLI2P10070 1586 aa29.83■■■□□ 2.37
SNRPA1-203ENST00000540017 TSPOAP1O95153 1857 aa29.78■■■□□ 2.36
SNRPA1-203ENST00000540017 KCNH8Q96L42 1107 aa29.75■■■□□ 2.35
SNRPA1-203ENST00000540017 FMN1Q68DA7 1419 aa29.73■■■□□ 2.35
SNRPA1-203ENST00000540017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.71■■■□□ 2.35
SNRPA1-203ENST00000540017 HNRNPUL2Q1KMD3 747 aaKnown RBP29.71■■■□□ 2.35
SNRPA1-203ENST00000540017 PPRC1Q5VV67 1664 aaKnown RBP29.71■■■□□ 2.35
SNRPA1-203ENST00000540017 MAP3K4Q9Y6R4 1608 aa29.71■■■□□ 2.35
SNRPA1-203ENST00000540017 CLIP1P30622 1438 aa29.7■■■□□ 2.34
SNRPA1-203ENST00000540017 LOC105371045A0A1W2PR82 267 aa29.68■■■□□ 2.34
SNRPA1-203ENST00000540017 CDK13Q14004 1512 aaKnown RBP29.64■■■□□ 2.34
SNRPA1-203ENST00000540017 ATP1B4Q9UN42 357 aaPredicted RBP29.63■■■□□ 2.33
SNRPA1-203ENST00000540017 HECW1Q76N89 1606 aa29.61■■■□□ 2.33
SNRPA1-203ENST00000540017 CD109Q6YHK3 1445 aa29.59■■■□□ 2.33
SNRPA1-203ENST00000540017 CFAP43Q8NDM7 1665 aa29.59■■■□□ 2.33
SNRPA1-203ENST00000540017 PLEKHD1A6NEE1 506 aa29.57■■■□□ 2.32
SNRPA1-203ENST00000540017 CEP162Q5TB80 1403 aa29.55■■■□□ 2.32
SNRPA1-203ENST00000540017 KDM6BO15054 1643 aa29.55■■■□□ 2.32
SNRPA1-203ENST00000540017 PCF11O94913 1555 aaKnown RBP29.55■■■□□ 2.32
SNRPA1-203ENST00000540017 LRRIQ1Q96JM4 1722 aa29.54■■■□□ 2.32
SNRPA1-203ENST00000540017 CASKIN1Q8WXD9 1431 aa29.54■■■□□ 2.32
SNRPA1-203ENST00000540017 ABCA9Q8IUA7 1624 aa29.53■■■□□ 2.32
SNRPA1-203ENST00000540017 MAGI3Q5TCQ9 1506 aa29.52■■■□□ 2.32
SNRPA1-203ENST00000540017 TEX14Q8IWB6 1497 aa29.52■■■□□ 2.32
SNRPA1-203ENST00000540017 COL17A1Q9UMD9 1497 aaPredicted RBP29.48■■■□□ 2.31
SNRPA1-203ENST00000540017 FYCO1Q9BQS8 1478 aa29.44■■■□□ 2.3
SNRPA1-203ENST00000540017 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.42■■■□□ 2.3
SNRPA1-203ENST00000540017 CDK11AQ9UQ88 783 aaPredicted RBP29.39■■■□□ 2.3
SNRPA1-203ENST00000540017 TTC37Q6PGP7 1564 aa29.39■■■□□ 2.29
SNRPA1-203ENST00000540017 CCDC18Q5T9S5 1454 aa29.38■■■□□ 2.29
SNRPA1-203ENST00000540017 TROQ12816 1431 aaPredicted RBP29.36■■■□□ 2.29
SNRPA1-203ENST00000540017 KIF14Q15058 1648 aa29.33■■■□□ 2.29
SNRPA1-203ENST00000540017 ARAP3Q8WWN8 1544 aa29.28■■■□□ 2.28
SNRPA1-203ENST00000540017 NEO1Q92859 1461 aa29.28■■■□□ 2.28
SNRPA1-203ENST00000540017 PHLDB1Q86UU1 1377 aa29.25■■■□□ 2.27
SNRPA1-203ENST00000540017 PLCH2O75038 1416 aa29.23■■■□□ 2.27
SNRPA1-203ENST00000540017 FANCAO15360 1455 aa29.23■■■□□ 2.27
SNRPA1-203ENST00000540017 AKNAQ7Z591 1439 aa29.19■■■□□ 2.26
SNRPA1-203ENST00000540017 VPS8Q8N3P4 1428 aa29.19■■■□□ 2.26
SNRPA1-203ENST00000540017 MYO5CQ9NQX4 1742 aa29.18■■■□□ 2.26
SNRPA1-203ENST00000540017 RAPGEF3O95398 923 aa29.17■■■□□ 2.26
SNRPA1-203ENST00000540017 CFAP74Q9C0B2 1584 aa29.15■■■□□ 2.26
SNRPA1-203ENST00000540017 FRMPD1Q5SYB0 1578 aa29.13■■■□□ 2.25
SNRPA1-203ENST00000540017 EFCAB2Q5VUJ9 269 aa29.1■■■□□ 2.25
SNRPA1-203ENST00000540017 MTUS2Q5JR59 1369 aa29.1■■■□□ 2.25
SNRPA1-203ENST00000540017 DENND4BO75064 1496 aaPredicted RBP29.09■■■□□ 2.25
SNRPA1-203ENST00000540017 CDC42BPBQ9Y5S2 1711 aa29.08■■■□□ 2.25
SNRPA1-203ENST00000540017 ARHGAP5Q13017 1502 aa29.08■■■□□ 2.25
SNRPA1-203ENST00000540017 ADGRL1O94910 1474 aa29.06■■■□□ 2.24
SNRPA1-203ENST00000540017 RICTORQ6R327 1708 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms