RNA–Protein interactions for RNA: ENST00000539896.1

PTAFR-203, Transcript of platelet activating factor receptor, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTAFR, Length 4,191 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTAFR-203ENST00000539896 CCDC88BA6NC98 1476 aa13.24□□□□□ -0.29
PTAFR-203ENST00000539896 KIF27Q86VH2 1401 aa13.23□□□□□ -0.29
PTAFR-203ENST00000539896 VPS8Q8N3P4 1428 aa13.23□□□□□ -0.29
PTAFR-203ENST00000539896 KDM2AQ9Y2K7 1162 aa13.23□□□□□ -0.29
PTAFR-203ENST00000539896 BCL11AQ9H165 835 aa13.22□□□□□ -0.29
PTAFR-203ENST00000539896 SENP3-EIF4A1A0A087X0R7 540 aa13.22□□□□□ -0.29
PTAFR-203ENST00000539896 ABCC8Q09428 1581 aa13.21□□□□□ -0.29
PTAFR-203ENST00000539896 KANK4Q5T7N3 995 aaPredicted RBP13.2□□□□□ -0.3
PTAFR-203ENST00000539896 PPP4R2Q9NY27 417 aa13.19□□□□□ -0.3
PTAFR-203ENST00000539896 RBM19Q9Y4C8 960 aaKnown RBP13.17□□□□□ -0.3
PTAFR-203ENST00000539896 BAZ1BQ9UIG0 1483 aaKnown RBP13.17□□□□□ -0.3
PTAFR-203ENST00000539896 UNC13AQ9UPW8 1703 aa13.17□□□□□ -0.3
PTAFR-203ENST00000539896 TSHZ2Q9NRE2 1034 aa13.16□□□□□ -0.3
PTAFR-203ENST00000539896 TIMELESSQ9UNS1 1208 aa13.15□□□□□ -0.3
PTAFR-203ENST00000539896 CCER2I3L3R5 266 aa13.15□□□□□ -0.3
PTAFR-203ENST00000539896 TSPY4P0CV99 314 aa13.14□□□□□ -0.31
PTAFR-203ENST00000539896 TSPY10P0CW01 314 aa13.14□□□□□ -0.31
PTAFR-203ENST00000539896 B4GALNT3Q6L9W6 998 aa13.14□□□□□ -0.31
PTAFR-203ENST00000539896 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.13□□□□□ -0.31
PTAFR-203ENST00000539896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.13□□□□□ -0.31
PTAFR-203ENST00000539896 UPF2Q9HAU5 1272 aaKnown RBP13.13□□□□□ -0.31
PTAFR-203ENST00000539896 NEFMP07197 916 aa13.12□□□□□ -0.31
PTAFR-203ENST00000539896 WDR43Q15061 677 aaKnown RBP eCLIP13.12□□□□□ -0.31
PTAFR-203ENST00000539896 SMARCA4P51532 1647 aa13.11□□□□□ -0.31
PTAFR-203ENST00000539896 SETD5Q9C0A6 1442 aa13.09□□□□□ -0.31
PTAFR-203ENST00000539896 TOP2AP11388 1531 aaKnown RBP13.08□□□□□ -0.32
PTAFR-203ENST00000539896 RAB3GAP2Q9H2M9 1393 aa13.07□□□□□ -0.32
PTAFR-203ENST00000539896 WIZO95785 1651 aa13.07□□□□□ -0.32
PTAFR-203ENST00000539896 NOP58Q9Y2X3 529 aaKnown RBP13.07□□□□□ -0.32
PTAFR-203ENST00000539896 HSP90AA1P07900 732 aaKnown RBP13.06□□□□□ -0.32
PTAFR-203ENST00000539896 CHGAP10645 457 aaKnown RBP13.06□□□□□ -0.32
PTAFR-203ENST00000539896 ARXQ96QS3 562 aa13.06□□□□□ -0.32
PTAFR-203ENST00000539896 FHAD1B1AJZ9 1412 aa13.05□□□□□ -0.32
PTAFR-203ENST00000539896 KCNH8Q96L42 1107 aa13.04□□□□□ -0.32
PTAFR-203ENST00000539896 RGL3Q3MIN7 710 aa13.04□□□□□ -0.32
PTAFR-203ENST00000539896 CARMIL1Q5VZK9 1371 aa13.03□□□□□ -0.32
PTAFR-203ENST00000539896 DDRGK1Q96HY6 314 aa13.03□□□□□ -0.32
PTAFR-203ENST00000539896 PPP1R15AO75807 674 aaPredicted RBP13.03□□□□□ -0.32
PTAFR-203ENST00000539896 CARD11Q9BXL7 1154 aa13.03□□□□□ -0.32
PTAFR-203ENST00000539896 HSPA5P11021 654 aaKnown RBP13.02□□□□□ -0.33
PTAFR-203ENST00000539896 DHX57Q6P158 1386 aaKnown RBP13.02□□□□□ -0.33
PTAFR-203ENST00000539896 LAS1LQ9Y4W2 734 aaKnown RBP13.02□□□□□ -0.33
PTAFR-203ENST00000539896 RUSC2Q8N2Y8 1516 aa13.01□□□□□ -0.33
PTAFR-203ENST00000539896 ANP32BQ92688 251 aaKnown RBP13□□□□□ -0.33
PTAFR-203ENST00000539896 CFDP1Q9UEE9 299 aaPredicted RBP13□□□□□ -0.33
PTAFR-203ENST00000539896 CUX2O14529 1486 aa13□□□□□ -0.33
PTAFR-203ENST00000539896 PPM1GO15355 546 aaPredicted RBP12.99□□□□□ -0.33
PTAFR-203ENST00000539896 BICRAQ9NZM4 1560 aa12.98□□□□□ -0.33
PTAFR-203ENST00000539896 SLC24A1O60721 1099 aa12.98□□□□□ -0.33
PTAFR-203ENST00000539896 DEKP35659 375 aaKnown RBP12.98□□□□□ -0.33
PTAFR-203ENST00000539896 CHMP7Q8WUX9 453 aaPredicted RBP12.97□□□□□ -0.33
PTAFR-203ENST00000539896 ERICH6BQ5W0A0 696 aa12.96□□□□□ -0.33
PTAFR-203ENST00000539896 RAPGEF2Q9Y4G8 1499 aa12.96□□□□□ -0.33
PTAFR-203ENST00000539896 PEG3Q9GZU2 1588 aa12.96□□□□□ -0.33
PTAFR-203ENST00000539896 PLEKHD1A6NEE1 506 aa12.96□□□□□ -0.34
PTAFR-203ENST00000539896 RTN4Q9NQC3 1192 aaKnown RBP12.96□□□□□ -0.34
PTAFR-203ENST00000539896 BECN1Q14457 450 aa12.94□□□□□ -0.34
PTAFR-203ENST00000539896 ARHGAP35Q9NRY4 1499 aa12.93□□□□□ -0.34
PTAFR-203ENST00000539896 FOXD1Q16676 465 aa12.93□□□□□ -0.34
PTAFR-203ENST00000539896 RGS3P49796 1198 aa12.92□□□□□ -0.34
PTAFR-203ENST00000539896 KNSTRNQ9Y448 316 aa12.92□□□□□ -0.34
PTAFR-203ENST00000539896 SMARCA2P51531 1590 aa12.91□□□□□ -0.34
PTAFR-203ENST00000539896 GLIPR1L2Q4G1C9 344 aa12.91□□□□□ -0.34
PTAFR-203ENST00000539896 EIF4G1Q04637 1599 aaKnown RBP12.89□□□□□ -0.35
PTAFR-203ENST00000539896 CC2D1BQ5T0F9 858 aaKnown RBP12.88□□□□□ -0.35
PTAFR-203ENST00000539896 DCAF11Q8TEB1 546 aa12.87□□□□□ -0.35
PTAFR-203ENST00000539896 MPHOSPH9Q99550 1183 aa12.87□□□□□ -0.35
PTAFR-203ENST00000539896 CDCA8Q53HL2 280 aa12.86□□□□□ -0.35
PTAFR-203ENST00000539896 L3MBTL2Q969R5 705 aa12.86□□□□□ -0.35
PTAFR-203ENST00000539896 NEUROD2Q15784 382 aa12.85□□□□□ -0.35
PTAFR-203ENST00000539896 STAG3Q9UJ98 1225 aa12.84□□□□□ -0.35
PTAFR-203ENST00000539896 PKD2Q13563 968 aa12.82□□□□□ -0.36
PTAFR-203ENST00000539896 NUDCQ9Y266 331 aa12.81□□□□□ -0.36
PTAFR-203ENST00000539896 RCAN3Q9UKA8 241 aa12.81□□□□□ -0.36
PTAFR-203ENST00000539896 FMN1Q68DA7 1419 aa12.81□□□□□ -0.36
PTAFR-203ENST00000539896 FRAT1Q92837 279 aaPredicted RBP12.81□□□□□ -0.36
PTAFR-203ENST00000539896 TRIM44Q96DX7 344 aaPredicted RBP12.8□□□□□ -0.36
PTAFR-203ENST00000539896 TCERG1O14776 1098 aaKnown RBP12.79□□□□□ -0.36
PTAFR-203ENST00000539896 CFAP53Q96M91 514 aa12.79□□□□□ -0.36
PTAFR-203ENST00000539896 FHOD3Q2V2M9 1422 aa12.79□□□□□ -0.36
PTAFR-203ENST00000539896 IPO9Q96P70 1041 aaKnown RBP12.78□□□□□ -0.36
PTAFR-203ENST00000539896 SENP3Q9H4L4 574 aaPredicted RBP12.78□□□□□ -0.36
PTAFR-203ENST00000539896 TMF1P82094 1093 aa12.78□□□□□ -0.36
PTAFR-203ENST00000539896 MYH16Q9H6N6 1097 aa12.78□□□□□ -0.36
PTAFR-203ENST00000539896 NPM1P06748 294 aaKnown RBP eCLIP12.77□□□□□ -0.37
PTAFR-203ENST00000539896 FTSJ3Q8IY81 847 aaKnown RBP12.77□□□□□ -0.37
PTAFR-203ENST00000539896 PRKRIP1Q9H875 184 aaPredicted RBP12.77□□□□□ -0.37
PTAFR-203ENST00000539896 ATAD2BQ9ULI0 1458 aa12.76□□□□□ -0.37
PTAFR-203ENST00000539896 TNNT2P45379 298 aaPredicted RBP12.75□□□□□ -0.37
PTAFR-203ENST00000539896 GOLGA6L22H0YM25 854 aa12.74□□□□□ -0.37
PTAFR-203ENST00000539896 RALBP1Q15311 655 aa12.74□□□□□ -0.37
PTAFR-203ENST00000539896 KTN1Q86UP2 1357 aaKnown RBP12.74□□□□□ -0.37
PTAFR-203ENST00000539896 TDRD9Q8NDG6 1382 aaKnown RBP12.73□□□□□ -0.37
PTAFR-203ENST00000539896 FANCIQ9NVI1 1328 aa12.73□□□□□ -0.37
PTAFR-203ENST00000539896 ESF1Q9H501 851 aaKnown RBP12.73□□□□□ -0.37
PTAFR-203ENST00000539896 HMGXB3Q12766 1538 aa12.72□□□□□ -0.37
PTAFR-203ENST00000539896 NCLP19338 710 aaKnown RBP12.71□□□□□ -0.38
PTAFR-203ENST00000539896 NAP1L5Q96NT1 182 aaPredicted RBP12.7□□□□□ -0.38
PTAFR-203ENST00000539896 ZBED9Q6R2W3 1325 aa12.7□□□□□ -0.38
PTAFR-203ENST00000539896 NUP155O75694 1391 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 281.1 ms